Sgr012263.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr012263.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	protein TIFY 5A
Location	tig00153293: 61709 .. 62836 (-)
Sequence length	420
RNA-Seq Expression	Sgr012263.1
Synteny	Sgr012263.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCGAAACTGCAACTTGGAACTTCGTCTTTCTCCCTCCTCCGTCTCTCTTCCGGCCACCTCCTTCTCCGTCGCTTCCGACCACCCCACCGTCGCCGCCGAACACTCCAACGGAAGCCCACAAAATCAACAACTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACAGAGCTTCAGGTACGTACTTACGATTTTTTTTTTCTTTTTTACCCTTTTTCAACTTCTCTTTCACGGGTTGTGTAGTACGAAACTTTCGTGCACCCGTTGGTCTATTTCTGGGGAATCCGCGTGGCAGGCGCGGATTGACCGTCGTCCGAATATGGGCCGCTGGCTGTCACTACGAGGCGTTGTACTTTTCTTCTTTTTGACTAAAATCGTCGAACGTCCCATACGACACTGCGCGTGCCCCCTTTCAGCGTAAAGCCGACAACGCGTTCTTGCTTTGTTGACATGTCGTTTTCACCGACTTTCGCCAACATTCGCTCTAACCTATTCTCTTTGTAAAAAACCCACGTTTTTTTTTTTTTTTATCTTTAATCATGTCTTCTTTTAATTTATTAATCTACTCGTATATATTTAATATAGAATAATCTCGTAATCCTTTTAATTATTATTATATCCTTTATTAAATTAATTTATTTTGATTCAAATATCAGAATATCAGAAAATAGTTGCGAATTTTCAGAGAGATATTCTTGGGTCAGTGGTCAGCTTTGATTGTAATCTGCTAATAATTTGCCTTAAAAACAAAATCCCGGAATTTTGTATGATATCTTTGATTGAATAGTTAGGATCGTATGTTGCAAGAGTATGATGTGGATAATTTAAATTTCAAAATTTTGAGTTAAGATATCATAGAATGCCACAAGGTTTTTAGATAATAATGATATTATGGATGAATGTTGCAGGCGAGAGCAATTTTAATGCTGGCAACAAAAGAAATGGAGGAGAAGACCCAAAGGAACTGCAACAGTCTCAGGCGCCACGGACCCCGACCACCCCGGGGCTCTACATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCATCGAGTCCAAGCTACTTCTCCATACCATCAACAATGAAGAACAATGATATTGGAAGAAAGTGA

mRNA sequence

ATGAGGCGAAACTGCAACTTGGAACTTCGTCTTTCTCCCTCCTCCGTCTCTCTTCCGGCCACCTCCTTCTCCGTCGCTTCCGACCACCCCACCGTCGCCGCCGAACACTCCAACGGAAGCCCACAAAATCAACAACTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACAGAGCTTCAGGCGCGGATTGACCGTCGTCCGAATATGGGCCGCTGGCTGTCACTACGAGGCGTTAAATGGAGGAGAAGACCCAAAGGAACTGCAACAGTCTCAGGCGCCACGGACCCCGACCACCCCGGGGCTCTACATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCATCGAGTCCAAGCTACTTCTCCATACCATCAACAATGAAGAACAATGATATTGGAAGAAAGTGA

Coding sequence (CDS)

ATGAGGCGAAACTGCAACTTGGAACTTCGTCTTTCTCCCTCCTCCGTCTCTCTTCCGGCCACCTCCTTCTCCGTCGCTTCCGACCACCCCACCGTCGCCGCCGAACACTCCAACGGAAGCCCACAAAATCAACAACTCACCATCTTCTACAACGGCAGGATCTGCGTCTGCGACGTTACAGAGCTTCAGGCGCGGATTGACCGTCGTCCGAATATGGGCCGCTGGCTGTCACTACGAGGCGTTAAATGGAGGAGAAGACCCAAAGGAACTGCAACAGTCTCAGGCGCCACGGACCCCGACCACCCCGGGGCTCTACATGAAGAGATCGCTGCAAAGATTTCTGCAGAAGAGGAAGCATCGAGTCCAAGCTACTTCTCCATACCATCAACAATGAAGAACAATGATATTGGAAGAAAGTGA

Protein sequence

MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVTELQARIDRRPNMGRWLSLRGVKWRRRPKGTATVSGATDPDHPGALHEEIAAKISAEEEASSPSYFSIPSTMKNNDIGRK

Homology

[Close]

BLAST of Sgr012263.1 vs. NCBI nr
Match: XP_038883218.1 (protein TIFY 5A-like [Benincasa hispida])

HSP 1 Score: 85.9 bits (211), Expect = 3.0e-13
Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S +  A      SDH + AA+   GSPQ+QQLTIFYNGRICVCDVT
Sbjct: 10 MRRNCNLELRLSPTSAAAAA-----VSDHSSAAAD---GSPQSQQLTIFYNGRICVCDVT 66

Query: 61 ELQAR 66
          E QAR
Sbjct: 70 EFQAR 66

[Close]

BLAST of Sgr012263.1 vs. NCBI nr
Match: KAG6581435.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-13
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S ++ A      SDH + A    N +PQ+QQLTIFYNGRICVCD T
Sbjct: 9  MRRNCNLELRLSPTSSAIAA-----VSDHSSAAVAAPNANPQSQQLTIFYNGRICVCDAT 67

Query: 61 ELQA 65
          ELQA
Sbjct: 69 ELQA 67

[Close]

BLAST of Sgr012263.1 vs. NCBI nr
Match: KAG7034727.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-13
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S ++ A      SDH + A    N +PQ+QQLTIFYNGRICVCD T
Sbjct: 1  MRRNCNLELRLSPTSSAIAA-----VSDHSSAAVAAPNANPQSQQLTIFYNGRICVCDAT 59

Query: 61 ELQA 65
          ELQA
Sbjct: 61 ELQA 59

[Close]

BLAST of Sgr012263.1 vs. NCBI nr
Match: XP_022926109.1 (protein TIFY 5A [Cucurbita moschata])

HSP 1 Score: 84.7 bits (208), Expect = 6.7e-13
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S ++ A      SDH + A    N +PQ+QQLTIFYNGRICVCD T
Sbjct: 9  MRRNCNLELRLSPTSSAIAA-----VSDHSSAAVAAPNANPQSQQLTIFYNGRICVCDAT 67

Query: 61 ELQA 65
          ELQA
Sbjct: 69 ELQA 67

[Close]

BLAST of Sgr012263.1 vs. NCBI nr
Match: XP_023544865.1 (protein TIFY 5A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S ++ A      SD  + A   +N SPQ+QQLTIFYNGRICVCD T
Sbjct: 9  MRRNCNLELRLSPTSSAIAA-----VSDQSSAAVAAANASPQSQQLTIFYNGRICVCDAT 67

Query: 61 ELQA 65
          ELQA
Sbjct: 69 ELQA 67

[Close]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL
Match: A0A6J1EE47 (protein TIFY 5A OS=Cucurbita moschata OX=3662 GN=LOC111433321 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.3e-13
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+S ++ A      SDH + A    N +PQ+QQLTIFYNGRICVCD T
Sbjct: 9  MRRNCNLELRLSPTSSAIAA-----VSDHSSAAVAAPNANPQSQQLTIFYNGRICVCDAT 67

Query: 61 ELQA 65
          ELQA
Sbjct: 69 ELQA 67

[Close]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL
Match: A0A0A0KI51 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523460 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.7e-12
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRNCNLELRLSP+    P  + +  SD P+  A+    SPQ+QQLTIFYNGRICVCDVT
Sbjct: 10 MRRNCNLELRLSPT--PNPNPNPAAVSDQPSATAD---DSPQSQQLTIFYNGRICVCDVT 69

Query: 61 ELQAR 66
          ELQAR
Sbjct: 70 ELQAR 69

[Close]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL
Match: A0A1R3H5U7 (Tify OS=Corchorus olitorius OX=93759 GN=COLO4_31051 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-11
Identity = 44/68 (64.71%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQN---QQLTIFYNGRICVC 60
          MRRNCNLELRL PS       S+  A D   +  E SN SPQN   QQLTIFYNG+ICVC
Sbjct: 1  MRRNCNLELRLLPS-------SYPTAGDRHDMVEESSNVSPQNQQQQQLTIFYNGKICVC 60

Query: 61 DVTELQAR 66
          DVTELQAR
Sbjct: 61 DVTELQAR 61

[Close]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL
Match: A0A1S3AZ71 (protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.8e-11
Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 1  MRRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSPQNQQLTIFYNGRICVCDVT 60
          MRRN NLELRLSP+  S  A + SV S +P+  A    GSPQ+QQLTIFYNGRICVCDVT
Sbjct: 10 MRRNYNLELRLSPTYSSAAAATASV-SGNPSPTA---YGSPQSQQLTIFYNGRICVCDVT 69

Query: 61 ELQAR 66
          ELQAR
Sbjct: 70 ELQAR 70

[Close]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL
Match: A0A438DHG0 (Protein TIFY 5A OS=Vitis vinifera OX=29760 GN=TIFY5A_2 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-11
Identity = 53/112 (47.32%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 2   RRNCNLELRLSPSSVSLPATSFSVASDHPTVAAEHSNGSP----QNQQLTIFYNGRICVC 61
           RRNCNLELRL P     P T +S    H  +  E   GSP    Q QQLTIFYNGRICVC
Sbjct: 3   RRNCNLELRLLP-----PNTDYSSPQHHHNMMMETGRGSPQEQQQQQQLTIFYNGRICVC 62

Query: 62  DVTELQARIDRRPNMGRWLSLRGVKWRRRPKGTATVSGATDPDHPGALHEEI 110
           DVTELQAR   +      L+ R ++ + R   T T S AT P    +LH ++
Sbjct: 63  DVTELQARAILQ------LASREMEEKTR---TPTASDATSP----SLHSQL 96

The following BLAST results are available for this feature:

BLAST of Sgr012263.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883218.1	3.0e-13	69.23	protein TIFY 5A-like [Benincasa hispida]	[more]
KAG6581435.1	6.7e-13	65.63	Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034727.1	6.7e-13	65.63	Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022926109.1	6.7e-13	65.63	protein TIFY 5A [Cucurbita moschata]	[more]
XP_023544865.1	1.5e-12	65.63	protein TIFY 5A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sgr012263.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr012263.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EE47	3.3e-13	65.63	protein TIFY 5A OS=Cucurbita moschata OX=3662 GN=LOC111433321 PE=3 SV=1	[more]
A0A0A0KI51	4.7e-12	66.15	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G523460 PE=3 S...	[more]
A0A1R3H5U7	1.0e-11	64.71	Tify OS=Corchorus olitorius OX=93759 GN=COLO4_31051 PE=3 SV=1	[more]
A0A1S3AZ71	1.8e-11	69.23	protein TIFY 5A OS=Cucumis melo OX=3656 GN=LOC103484359 PE=3 SV=1	[more]
A0A438DHG0	3.1e-11	47.32	Protein TIFY 5A OS=Vitis vinifera OX=29760 GN=TIFY5A_2 PE=3 SV=1	[more]

BLAST of Sgr012263.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 40..65 e-value: 2.0E-11 score: 43.0
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 39..73 score: 8.976618
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..139
None	No IPR available	PANTHER	PTHR33077:SF99	SUBFAMILY NOT NAMED	coord: 1..65
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 1..65

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr012263	Sgr012263	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr012263.1.exon3	Sgr012263.1.exon3	exon
Sgr012263.1.exon2	Sgr012263.1.exon2	exon
Sgr012263.1.exon1	Sgr012263.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr012263.1	cds.Sgr012263.1_3	CDS
cds.Sgr012263.1	cds.Sgr012263.1_2	CDS
cds.Sgr012263.1	cds.Sgr012263.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr012263.1	Sgr012263.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus