Sed0026525.1 (mRNA) Chayote v1

Overview


Name	Sed0026525.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	MAPK kinase substrate protein At1g80180-like
Location	LG06: 45106559 .. 45107256 (-)
Sequence length	698
RNA-Seq Expression	Sed0026525.1
Synteny	Sed0026525.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAATCAAAAAATTATTTTATTTCATCTCTCTTTCTCTCTCTTTTCCTATTTATGATAGAGAAACTTCCCAAAGCGCAAAAATAAAAACCAGAAAAGTTTTTTTAAAAAAACAGAGCAAATTTCTCTGTTAATTTCGGTGAAAGAAAAACCCAAAATTTTTTGGCTATGGAAGGTTTGAAGAGATCGGAAGTTTCTTTCCGGCGGCAAGGATCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGGGAATTGAAGAAAGACGCCGCCGCGTCGGAAAAAGAACCAGATGAAAAATCGACGGCGGCGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGGACCGGGAAAGATTCGCCGGCGATCGAGCCGCCGTCGCCGAAGGTGTCTGTTTGTGGATTCTGCAGCGCCTTCAGGAATCCGGCGAGGAAAAGCCGCCGGACGAAAACCGTTATGCGTAGATCGCGATGAATTCCGAAATTCTCCGGCGATTTCCGCCGGTTGGTCTGAGTGGGAATTTTGGTGGAAATAGAAATTAGGTTTTGTGGGAGTTATTATACTTTTAATTTTAAAAATCATGTTTCTTGTGCTTTTGTTATTTTTTTTTACATCTTAGAATTGTAATTTGTGTGTACATTATATAAAGTATACATTTTGTGTTGGTTCAAA

mRNA sequence

ATTTTAAATCAAAAAATTATTTTATTTCATCTCTCTTTCTCTCTCTTTTCCTATTTATGATAGAGAAACTTCCCAAAGCGCAAAAATAAAAACCAGAAAAGTTTTTTTAAAAAAACAGAGCAAATTTCTCTGTTAATTTCGGTGAAAGAAAAACCCAAAATTTTTTGGCTATGGAAGGTTTGAAGAGATCGGAAGTTTCTTTCCGGCGGCAAGGATCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGGGAATTGAAGAAAGACGCCGCCGCGTCGGAAAAAGAACCAGATGAAAAATCGACGGCGGCGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGGACCGGGAAAGATTCGCCGGCGATCGAGCCGCCGTCGCCGAAGGTGTCTGTTTGTGGATTCTGCAGCGCCTTCAGGAATCCGGCGAGGAAAAGCCGCCGGACGAAAACCGTTATGCGTAGATCGCGATGAATTCCGAAATTCTCCGGCGATTTCCGCCGGTTGGTCTGAGTGGGAATTTTGGTGGAAATAGAAATTAGGTTTTGTGGGAGTTATTATACTTTTAATTTTAAAAATCATGTTTCTTGTGCTTTTGTTATTTTTTTTTACATCTTAGAATTGTAATTTGTGTGTACATTATATAAAGTATACATTTTGTGTTGGTTCAAA

Coding sequence (CDS)

ATGGAAGGTTTGAAGAGATCGGAAGTTTCTTTCCGGCGGCAAGGATCATCGGGACTGGTCTGGGACGACCGGTTTTTATCCGGGGAATTGAAGAAAGACGCCGCCGCGTCGGAAAAAGAACCAGATGAAAAATCGACGGCGGCGGAGCCGATCAATACGACGATCGAGAGGAGCCGATCCAACGGCGGCCGTGGGTACCGGACCGGGAAAGATTCGCCGGCGATCGAGCCGCCGTCGCCGAAGGTGTCTGTTTGTGGATTCTGCAGCGCCTTCAGGAATCCGGCGAGGAAAAGCCGCCGGACGAAAACCGTTATGCGTAGATCGCGATGA

Protein sequence

MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDEKSTAAEPINTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR

Homology

[Close]

BLAST of Sed0026525.1 vs. NCBI nr
Match: KAG6606789.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036501.1 MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 94/118 (79.66%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAA-----SEKEPDEKST----AAEPI 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ AAA     SE+ PD KST    A EPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESEENPDAKSTTPAVALEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           NTTIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 118

[Close]

BLAST of Sed0026525.1 vs. NCBI nr
Match: XP_022998926.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38
Identity = 93/117 (79.49%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKE----PDEKST----AAEPIN 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ AAASEKE    P+ KST      EPIN
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAASEKESEENPEAKSTTPAVTLEPIN 60

Query: 61  TTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           TTIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+K+RRTKT  RRSR
Sbjct: 61  TTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKARRTKTGKRRSR 117

[Close]

BLAST of Sed0026525.1 vs. NCBI nr
Match: XP_023525193.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 6.2e-38
Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKE-PDEKST----AAEPINTTI 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ AAA+  E P+ KST    A EPINTTI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAASENPEAKSTTPAVALEPINTTI 60

Query: 61  ERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           ERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  ERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 114

[Close]

BLAST of Sed0026525.1 vs. NCBI nr
Match: XP_038899093.1 (MAPK kinase substrate protein At1g80180-like [Benincasa hispida])

HSP 1 Score: 166.4 bits (420), Expect = 1.4e-37
Identity = 92/115 (80.00%), Postives = 97/115 (84.35%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDE----KST--AAEPINTT 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ AAASEKE +E    KST  A EPI+ T
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAASEKESEENQEAKSTTAAVEPISIT 60

Query: 61  IERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           IERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  P +KSRRTKT  RRSR
Sbjct: 61  IERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPTKKSRRTKTGKRRSR 115

[Close]

BLAST of Sed0026525.1 vs. NCBI nr
Match: XP_011654316.1 (MAPK kinase substrate protein At1g80180 [Cucumis sativus] >KGN52876.1 hypothetical protein Csa_015127 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 5.2e-37
Identity = 92/120 (76.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDE-----KSTAA------E 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ A  SEKE +E     KSTAA      E
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEENQDQGKSTAAAAAAAVE 60

Query: 61  PINTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           PI+ TIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  PISITIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 120

[Close]

BLAST of Sed0026525.1 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLS------GELKKDAAASEKEPDEKSTAAE----- 60
           MEGL+RS +SFRRQGSSG+V+DDR ++         +KD +  +++P   S ++E     
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKPI 60

Query: 61  -------PINT------TIERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF- 110
                  PI T       IERSRSNGG   R    TG+ SPA++PPSP++S CG CSAF 
Sbjct: 61  DEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAFG 120

[Close]

BLAST of Sed0026525.1 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-15
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEK----EPDEKS----------- 60
           M GL+RS +SFRRQGSSG+VWDDR ++ EL + AA   K    + DE++           
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  ------TAAEPINTT--IERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF-- 110
                    +PI T   +ERSRSNGG   R    TG+ SPA++PPSP++S  G CSAF  
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGK 120

[Close]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL
Match: A0A6J1KBK3 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111493442 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38
Identity = 93/117 (79.49%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKE----PDEKST----AAEPIN 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ AAASEKE    P+ KST      EPIN
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAASEKESEENPEAKSTTPAVTLEPIN 60

Query: 61  TTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           TTIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+K+RRTKT  RRSR
Sbjct: 61  TTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKARRTKTGKRRSR 117

[Close]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL
Match: A0A0A0KYE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004870 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37
Identity = 92/120 (76.67%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDE-----KSTAA------E 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ A  SEKE +E     KSTAA      E
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEENQDQGKSTAAAAAAAVE 60

Query: 61  PINTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           PI+ TIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  PISITIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 120

[Close]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL
Match: A0A6J1GBH4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111452467 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37
Identity = 93/118 (78.81%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKD-AAASEKE----PDEKST----AAEPI 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+  AAA+EKE    P+ KST    A EPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTAAAAAEKESVENPEAKSTTPAVALEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           NTTIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRS+
Sbjct: 61  NTTIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSQ 118

[Close]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL
Match: A0A5A7TMJ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold52012G00010 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.3e-37
Identity = 91/118 (77.12%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDE-----KSTA----AEPI 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ A  SEKE +E     KSTA     EPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEENQDQGKSTATATGVEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           + TIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  SITIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 118

[Close]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL
Match: A0A1S4DZT3 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC107991268 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.3e-37
Identity = 91/118 (77.12%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDE-----KSTA----AEPI 60
           MEGL+RS VSFRRQGSSGLVWDDRFLSGELK+ A  SEKE +E     KSTA     EPI
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEENQDQGKSTATATGVEPI 60

Query: 61  NTTIERSRSNGGRGYRTGKDSPAIEPPSPKVSVCGFCSAFRNPARKSRRTKTVMRRSR 110
           + TIERSRSNGGRGYRTGK SPAIEPPSPKVS CGFCSAF  PA+KSRRTKT  RRSR
Sbjct: 61  SITIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPAKKSRRTKTGKRRSR 118

[Close]

BLAST of Sed0026525.1 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.8e-19
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 4   LKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEKEPDEKSTAAEPINTTIERSRSNGG 63
           L+RS  SFRRQGSSGL+W+DRFLSGE++ D    ++  D +  +      T++RS S+GG
Sbjct: 3   LQRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCNDHRDGSMAATTATVKRSASDGG 62

Query: 64  RGY--RTGKDSPAIEPPSPKVSV--CGFCSAF-RNPARKSR 100
            G+  R G+ SPA++PPSPK+S   CGFCS F  N  R+SR
Sbjct: 63  CGHGGRLGELSPALDPPSPKISAVGCGFCSLFSSNGKRRSR 103

[Close]

BLAST of Sed0026525.1 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLS------GELKKDAAASEKEPDEKSTAAE----- 60
           MEGL+RS +SFRRQGSSG+V+DDR ++         +KD +  +++P   S ++E     
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKPI 60

Query: 61  -------PINT------TIERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF- 110
                  PI T       IERSRSNGG   R    TG+ SPA++PPSP++S CG CSAF 
Sbjct: 61  DEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAFG 120

[Close]

BLAST of Sed0026525.1 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLS------GELKKDAAASEKEPDEKSTAAE----- 60
           MEGL+RS +SFRRQGSSG+V+DDR ++         +KD +  +++P   S ++E     
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKPI 60

Query: 61  -------PINT------TIERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF- 110
                  PI T       IERSRSNGG   R    TG+ SPA++PPSP++S CG CSAF 
Sbjct: 61  DEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAFG 120

[Close]

BLAST of Sed0026525.1 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLS------GELKKDAAASEKEPDEKSTAAE----- 60
           MEGL+RS +SFRRQGSSG+V+DDR ++         +KD +  +++P   S ++E     
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDEQPKPMSESSEQVKPI 60

Query: 61  -------PINT------TIERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF- 110
                  PI T       IERSRSNGG   R    TG+ SPA++PPSP++S CG CSAF 
Sbjct: 61  DEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAFG 120

[Close]

BLAST of Sed0026525.1 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-16
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 1   MEGLKRSEVSFRRQGSSGLVWDDRFLSGELKKDAAASEK----EPDEKS----------- 60
           M GL+RS +SFRRQGSSG+VWDDR ++ EL + AA   K    + DE++           
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  ------TAAEPINTT--IERSRSNGGRGYR----TGKDSPAIEPPSPKVSVCGFCSAF-- 110
                    +PI T   +ERSRSNGG   R    TG+ SPA++PPSP++S  G CSAF  
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGK 120

The following BLAST results are available for this feature:

BLAST of Sed0026525.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606789.1	1.6e-38	79.66	MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022998926.1	2.1e-38	79.49	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]
XP_023525193.1	6.2e-38	80.70	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]
XP_038899093.1	1.4e-37	80.00	MAPK kinase substrate protein At1g80180-like [Benincasa hispida]	[more]
XP_011654316.1	5.2e-37	76.67	MAPK kinase substrate protein At1g80180 [Cucumis sativus] >KGN52876.1 hypothetic...	[more]

BLAST of Sed0026525.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI29	4.1e-16	43.57	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]
Q9SSC1	3.4e-15	43.17	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]

BLAST of Sed0026525.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBK3	1.0e-38	79.49	MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A0A0KYE3	2.5e-37	76.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004870 PE=4 SV=1	[more]
A0A6J1GBH4	2.5e-37	78.81	MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7TMJ8	4.3e-37	77.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DZT3	4.3e-37	77.12	uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC107991268 P...	[more]

BLAST of Sed0026525.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20100.1	1.8e-19	50.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15400.1	2.9e-17	43.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.2	2.9e-17	43.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.3	2.9e-17	43.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G80180.1	2.4e-16	43.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..97 e-value: 1.2E-29 score: 103.3
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	OS05G0542732 PROTEIN-RELATED	coord: 1..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..79
None	No IPR available	PANTHER	PTHR33730:SF4	OS05G0542732 PROTEIN	coord: 1..106

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0026525	Sed0026525	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026525.1-three_prime_utr	Sed0026525.1-three_prime_utr-LG06:45106559..45106756	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026525.1-exon	Sed0026525.1-exon-LG06:45106559..45107256	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026525.1-cds	Sed0026525.1-cds-LG06:45106757..45107086	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0026525.1-five_prime_utr	Sed0026525.1-five_prime_utr-LG06:45107087..45107256	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0026525.1	Sed0026525.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity