Sed0023851.1 (mRNA) Chayote v1

Overview


Name	Sed0023851.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	transmembrane protein 234 homolog
Location	LG12: 29658590 .. 29658973 (+)
Sequence length	384
RNA-Seq Expression	Sed0023851.1
Synteny	Sed0023851.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA

mRNA sequence

ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA

Coding sequence (CDS)

ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA

Protein sequence

MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIVFGVWLCIT

Homology

[Close]

BLAST of Sed0023851.1 vs. NCBI nr
Match: KAA0062621.1 (transmembrane protein 234-like protein [Cucumis melo var. makuwa] >TYJ98060.1 transmembrane protein 234-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQS-SSDSTKPFSSLRRWLKLFSIWQYT 60

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALI
Sbjct: 61  LPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALI 120

Query: 121 VFGVWLCIT 128
            FGVWLCI+
Sbjct: 121 GFGVWLCIS 128

[Close]

BLAST of Sed0023851.1 vs. NCBI nr
Match: XP_016902925.1 (PREDICTED: transmembrane protein 234 homolog [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 11  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQS-SSDSTKPFSSLRRWLKLFSIWQYT 70

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALI
Sbjct: 71  LPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALI 130

Query: 121 VFGVWLCIT 128
            FGVWLCI+
Sbjct: 131 GFGVWLCIS 138

[Close]

BLAST of Sed0023851.1 vs. NCBI nr
Match: XP_038879672.1 (transmembrane protein 234 homolog [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.8e-50
Identity = 111/127 (87.40%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSS-NSSLRRWLRLLSIWQYTL 60
           MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S+S  +   SSLRRWL+LLSIWQYTL
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTKLLSSLRRWLKLLSIWQYTL 60

Query: 61  PFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIV 120
           PF LNLTASATFFAILS A ISLAVP+TNATTFAATAVFGMLLGEDTRVGYALFGTALI 
Sbjct: 61  PFLLNLTASATFFAILSDAPISLAVPITNATTFAATAVFGMLLGEDTRVGYALFGTALIG 120

Query: 121 FGVWLCI 127
            GVWLCI
Sbjct: 121 LGVWLCI 127

[Close]

BLAST of Sed0023851.1 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 112/131 (85.50%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIW 60
           MIGDVEKMVAIG+VWGATNA MRRGALLWDQAL+  SN+  SSN   SSLRRWL+LLSIW
Sbjct: 1   MIGDVEKMVAIGMVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYTLPF +NLTASATFFAILS A ISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTLPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIVFGVWLCI 127
           ALI  GVWLCI
Sbjct: 121 ALIGLGVWLCI 131

[Close]

BLAST of Sed0023851.1 vs. NCBI nr
Match: XP_004150555.2 (LOW QUALITY PROTEIN: transmembrane protein 234 homolog [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 111/128 (86.72%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATN  MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 2   MIGDVEKMVAIGLVWGATNVLMRRGALLWDQALKS-SSDSTKPFSSLRRWLKLFSIWQYT 61

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPFFLNLTASATFF ILSHA ISLAVPVTNATTFAA AVFGMLLGE TRVGYALFGT LI
Sbjct: 62  LPFFLNLTASATFFTILSHAPISLAVPVTNATTFAAXAVFGMLLGEATRVGYALFGTTLI 121

Query: 121 VFGVWLCI 127
            FGVWLCI
Sbjct: 122 GFGVWLCI 128

[Close]

BLAST of Sed0023851.1 vs. ExPASy Swiss-Prot
Match: Q54ZG7 (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 38/124 (30.65%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 4   DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFL 63
           ++  ++ +G +WG TN  ++RG+    +  + N     +  +  ++ L +   YT+P  +
Sbjct: 5   NIISLLLVGFIWGGTNPLIKRGSEGVSKVKKDNFL---SQIIYEFVYLWTRPSYTIPMLI 64

Query: 64  NLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIVFGVW 123
           NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLLGE      +  G   ++ GV 
Sbjct: 65  NLSGSVVFFYTLSKVDISLVVPISNSLTFLFTSLMGMLLGEKVLHFKSYLGMIFVLAGVT 124

Query: 124 LCIT 128
           +C++
Sbjct: 125 ICVS 125

[Close]

BLAST of Sed0023851.1 vs. ExPASy Swiss-Prot
Match: A0NGI1 (Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-10
Identity = 42/125 (33.60%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 5   VEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLR---LLSIWQYTLPF 64
           V  ++ + ++WGATN F++RG++ +++      ADS    L  WL    L++ WQY LP 
Sbjct: 17  VLSILLVAIMWGATNPFIKRGSIGYNEL----KADSKLGQL--WLEVRFLITRWQYLLPL 76

Query: 65  FLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALF-GTALIVF 124
            +N   S  +   L    +SL VP+ N+ TF  TA+   LLGE  + G+ ++ G  L++ 
Sbjct: 77  VINQLGSIVYVLTLQRTELSLTVPMANSLTFVFTAITARLLGE-RQSGWKIYCGMTLVIL 134

Query: 125 GVWLC 126
           G  +C
Sbjct: 137 GTVIC 134

[Close]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL
Match: A0A5A7VAD4 (Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00120 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQS-SSDSTKPFSSLRRWLKLFSIWQYT 60

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALI
Sbjct: 61  LPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALI 120

Query: 121 VFGVWLCIT 128
            FGVWLCI+
Sbjct: 121 GFGVWLCIS 128

[Close]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL
Match: A0A1S4E4M5 (transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 11  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQS-SSDSTKPFSSLRRWLKLFSIWQYT 70

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVFG+LLGEDTRVGYALFGTALI
Sbjct: 71  LPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGTALI 130

Query: 121 VFGVWLCIT 128
            FGVWLCI+
Sbjct: 131 GFGVWLCIS 138

[Close]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL
Match: A0A0A0LT65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50
Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYT 60
           MIGDVEKMVAIGLVWGATN  MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYT
Sbjct: 2   MIGDVEKMVAIGLVWGATNVLMRRGALLWDQALKS-SSDSTKPFSSLRRWLKLFSIWQYT 61

Query: 61  LPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALI 120
           LPFFLNLTASATFF ILSHA ISLAVPVTNATTFAATAVFGMLLGE TRVGYALFGT LI
Sbjct: 62  LPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGYALFGTTLI 121

Query: 121 VFGVWLCI 127
            FGVWLCI
Sbjct: 122 GFGVWLCI 128

[Close]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL
Match: A0A6J1HBE7 (transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.0e-49
Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIW 60
           MIGDVEKMVAIG+VWGATNA MRRGALLWDQAL+  SN+  SSN   SSLRRWL+LLSIW
Sbjct: 1   MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYT+PF +NLTASATFFAILS A ISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIVFGVWLCI 127
           ALI  GVWLCI
Sbjct: 121 ALIGLGVWLCI 131

[Close]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL
Match: A0A6J1JK46 (transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIW 60
           MIGDVEKMVAIG+ WGATNA MRRGALLWDQAL+  SN+  SSN   SS RRWL+LLSIW
Sbjct: 1   MIGDVEKMVAIGIAWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSFRRWLKLLSIW 60

Query: 61  QYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGT 120
           QYT+PF +NLTASATFFAILS A ISLAVPVTNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIVFGVWLCI 127
           ALI  GVWLCI
Sbjct: 121 ALIGLGVWLCI 131

[Close]

BLAST of Sed0023851.1 vs. TAIR 10
Match: AT5G19570.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-41
Identity = 82/133 (61.65%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 4   DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNS----------SLRRWLRLLS 63
           D++KMVA+GLVWGATNA +RRGAL WD+   S++ +S +           +LR W+ LL 
Sbjct: 4   DMDKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLL 63

Query: 64  IWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALF 123
            WQY++PF +NL+ASATFFA+LSHA ISLAVPVTNATTFAATA FG+LLGE+T++G AL 
Sbjct: 64  FWQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLALL 123

Query: 124 GTALIVFGVWLCI 127
           GT+ IVFG+WLC+
Sbjct: 124 GTSFIVFGIWLCV 136

The following BLAST results are available for this feature:

BLAST of Sed0023851.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062621.1	3.7e-50	87.60	transmembrane protein 234-like protein [Cucumis melo var. makuwa] >TYJ98060.1 tr...	[more]
XP_016902925.1	3.7e-50	87.60	PREDICTED: transmembrane protein 234 homolog [Cucumis melo]	[more]
XP_038879672.1	4.8e-50	87.40	transmembrane protein 234 homolog [Benincasa hispida]	[more]
XP_023516356.1	1.8e-49	85.50	transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_004150555.2	2.4e-49	86.72	LOW QUALITY PROTEIN: transmembrane protein 234 homolog [Cucumis sativus]	[more]

BLAST of Sed0023851.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ZG7	2.3e-10	30.65	Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0...	[more]
A0NGI1	5.1e-10	33.60	Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=...	[more]

BLAST of Sed0023851.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAD4	1.8e-50	87.60	Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4E4M5	1.8e-50	87.60	transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 S...	[more]
A0A0A0LT65	2.3e-50	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1	[more]
A0A6J1HBE7	2.0e-49	84.73	transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 ...	[more]
A0A6J1JK46	1.7e-48	83.21	transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE...	[more]

BLAST of Sed0023851.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19570.1	2.0e-41	61.65	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018908	Putative transmembrane family 234	PFAM	PF10639	TMEM234	coord: 8..126 e-value: 1.2E-26 score: 93.0
IPR018908	Putative transmembrane family 234	PANTHER	PTHR28668	TRANSMEMBRANE PROTEIN 234	coord: 1..127
None	No IPR available	GENE3D	1.10.3730.20		coord: 10..127 e-value: 1.2E-6 score: 30.7
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 45..125

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0023851	Sed0023851	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023851.1-exon	Sed0023851.1-exon-LG12:29658590..29658973	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023851.1-cds	Sed0023851.1-cds-LG12:29658590..29658973	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0023851.1	Sed0023851.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane