Sed0023851 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTCTGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCATTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGYALFGTALIVFGVWLCIT Homology
BLAST of Sed0023851 vs. NCBI nr
Match: KAA0062621.1 (transmembrane protein 234-like protein [Cucumis melo var. makuwa] >TYJ98060.1 transmembrane protein 234-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50 Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Sed0023851 vs. NCBI nr
Match: XP_016902925.1 (PREDICTED: transmembrane protein 234 homolog [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50 Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Sed0023851 vs. NCBI nr
Match: XP_038879672.1 (transmembrane protein 234 homolog [Benincasa hispida]) HSP 1 Score: 208.0 bits (528), Expect = 4.8e-50 Identity = 111/127 (87.40%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Sed0023851 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49 Identity = 112/131 (85.50%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of Sed0023851 vs. NCBI nr
Match: XP_004150555.2 (LOW QUALITY PROTEIN: transmembrane protein 234 homolog [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49 Identity = 111/128 (86.72%), Postives = 115/128 (89.84%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy Swiss-Prot
Match: Q54ZG7 (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10 Identity = 38/124 (30.65%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy Swiss-Prot
Match: A0NGI1 (Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.1e-10 Identity = 42/125 (33.60%), Postives = 69/125 (55.20%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy TrEMBL
Match: A0A5A7VAD4 (Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00120 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50 Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy TrEMBL
Match: A0A1S4E4M5 (transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50 Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy TrEMBL
Match: A0A0A0LT65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50 Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy TrEMBL
Match: A0A6J1HBE7 (transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.0e-49 Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of Sed0023851 vs. ExPASy TrEMBL
Match: A0A6J1JK46 (transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48 Identity = 109/131 (83.21%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Sed0023851 vs. TAIR 10
Match: AT5G19570.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 166.0 bits (419), Expect = 2.0e-41 Identity = 82/133 (61.65%), Postives = 105/133 (78.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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