Sed0016887.2 (mRNA) Chayote v1

Overview


Name	Sed0016887.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	SpoU_methylase domain-containing protein
Location	LG07: 20107475 .. 20113249 (+)
Sequence length	2009
RNA-Seq Expression	Sed0016887.2
Synteny	Sed0016887.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATAGTTGTGGGGTGGAGGCGGAGAGAAATAGAAGAATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGTCTTTCTTTATCTTTCACTTTGCCCCCTAATTTTTTGCCTTCTGCCCTTAATTTTGTTATCTATTTTCAATTAGTTTCATCGACAAATTTCATTTCCTCTCGAAGTGGGAATCCTGAACCTTTGATTTCTTTTTTAGTATTCGTTATATGGGTTAAATACTTCCCCCATTGTAGGTCCAGCGTAAAGACGGAGTGCTGTTTTGTGAATTTCCCCTGAAATGTTTGTCAGAATAATTAAGATCCCGTTTAATAACCATTTTGTTTTTTGTGTTTTATTTATGAAATTTAAGCCTACAATAAATACCTTACCGTATATTTTTCCTTATTTGGATAACTACATCTTACCTTTATTTTGATAAACAAAACCAAAATTTGGAAACAAAAAAGCTTGTTTTTGTTTTTGAAATTTGGATAGTATTCACCTACTTTATTAAGAAAATATGGATACATTGTGGGAAAGATGGAGCACATGATAGGAAATTTGAGTAGAAATAAACTTAAATTTCATAAATAAAAAACAATAAACCAAATGATTATCAAACGGGGCATAAGTTCTTGGGTGCCAATAAGAGCATACCTCTAGTGACATCTTGTATAATCAAGTAAAATATATATTTTTTTGTATAGCTCGATACATATCAATCCGAAGCTTTGAGAAAGTTGGACATCCAATTTCAAGTCCTAAGAGGAGAGGGCTTGTAAATCTGAGGGATTATCTCATGAATAAACTATACATCCGAGAGGAAAGAAAGAACTCTTATACCCTGCATCAGAACTGGCCATAGGAAAAAGGGAAGATCATGACTCATCCCATATTGGTGTCAAAAGGTGAAATGTGTGGAGAAGACGTGCGATTCATTGTCGATTAGATCGGCAAAAGATGGGGTGAGTTACCAAAGCTTCAGAAAGAGGACTCACGGTTCACTACTTTAGCTGAGAAGAGGCTGTAGAATAAAAAAGTCGCCAGGAAAGGGTGCATCAAGGCAAGGAACTCACACGGTTCTCCAGCACACAAGCCAGTTCTCATGTTCAACACTCGGACAACATTGGAGTTGAGGAGCAATGTCAAGAAACGCACACAAAAATAGATACTAGTTGCCAAAGTTGAGGGGAGCTATTATTGCTCGCACAACTTTCACTGCAAACGACAGGCTTTCAAAGACTGACCAACATCGGTGTTAAGGAGCAACGTCGCGTGAAGTTCAATCAACTGATTGGACTATGAAACCCCCTAAAAAATTGGGAAAAATGAAACAATTTGTGTGCACCAAACTGTTTGGTGGATTGGATCGATCAACACAGATCGAACTGGTCTATTACAAAATATTGTTTCAATCAGGGCCATATCAAGGAAGAAAGGCATCACCGCCGTTGACCCTTCGGGAGTTCTCACACACCCTTTGGCATGCTCTAAAGACGCATGTGAAACCAAGAAAGTTGCATTGTGTGAGTCTTGAAAGATGCTCGAAGGGTCACGTGATGCCTCGCCCAGTGTTTTAAAAAGCCCCGTCAGGCGCGCGCCTAGGCCCAAGGCGCACCTCTTGTGCCTCGCCTGGGAAAGACGAGGCGCTCGCCTTTTGGCGCCTTACGTGAAGACCCGGGCGCCAAAAGGCGCGCGCCTTGGGGGCTTTTTTTTATTTTCTTTATATTTTTTCATGTTTTCACCTTTATCCTTTGTGAGATCCCTGTACTAGGTCATTCAAAGTGCAAGATAACTAATTCAAGACATTTCAATACCTTAAATAACTTAATTCTTCAACTCACAAAGACAACATTCGCTTAAATGAAAGGTTAATAGTTGAAGCTTATGTATGTTTTGTATATATTCTTAGTTAAACTTCATTTCTTTCCATGAAATGAAGGTTAATAGTTAAATGTAATTTATGTTTTGTATATTATTCTTGGTTAAAACTTTATTTATGTCTATGGAAATGTGTATACACACACACATATATATATATATATATATATATATATATATATAAAATTTGTGTTTTTTATATAGTGCGCCTGATGTAAACCTGCGCCTTATGGTGCACCTCAGGCCCCAGAGGCCCATTGCGCCTTTGTGCGCCTTGGGCTTTTTAAAACACCTGGCCTCGCCAGACATGATGGCGGTTTGTAGCTAGAAACACTGCAAAGATCACAAAGCCTTGCCAAACCACTGTGAACCTCGTCAGAACGCTGGAATAAATTGTGGTTTGAGTCCATATCTGTAAATCGGCCAGTCCGTAAATTTTTTTTGTGTATTTACCATTGATGATGGGAAATGGAGGAGGAAAAGGGGTTGTTATCACCATTGGGATGGTCATGTCGATGTTCCTCCTCCAGCACCGGTGAGGAGCGGTGCTAGAGTGGGAGGGAGATATTTTGCTTAGGGTTTTGCTGCGAGAGTTTAGAGAGAGGGAGATTAAAAGGTTACAAGTGCGAATCTCTCCTCTCCACAAATGTTGAATTAAAAAAAAGAAGAATTAAGTTCTTGGAATCAGGTCTAACGTAATAGCAAGCTTGTGATCGAATATTTTTGAAGCATCCTTAAGCATCCTCCAGAGTTTTATTTGTTTGTGGGTGTTCTCTGATTGAACTACAATGTAGTTTCAGTTTTTTTAACTTTTGAAACTCGATATTAATTTGCTAAAGGAAGTTGCTGGAGTTATGTAGAAATTATGCTTTCTTTCATCAACTTCTGCATAGATTCACTCTTGTGAAGTCAAATTTGTTGTTATGGTTGTTTTGTTTAGTTTACAGATTACTCTGTTTATAGTTTGCAAAGAAGCCAATCCTATTTCATCTCTTTTGTGGAAGCTTGCCGATATTGCTGTTCATTTCTAATTGGAATGAGAATTGTTGAAATTTTATGTAAACTATTTTCTTCTTATCGATTCCAATCATTTCAATTCAATCTTTTTGTAGCATAACAAATATGATCTAATGCTCTTCCTTTGTGACATTATTTGTGGTAAAATGGTTTGCTCGACTTCATAAGGTTTACATGCACTTACATCTAATCTTGGTCTTTTACAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGTAATTCTATCATCTAACTATCCTGTTTCTAAGTTCTTACGAAGTATGTATCATTCCCTCCATTTCATTCCATAACTACTTGCTAAGATGCCTTTTATACCTTGTATTGAGCTATCACTCTATGGTATTTTCTTGTGCATATTGACATCACAATAGTTTCCATATACTCATCCATAAAGATAAAATGATCTATTGTCTTAATTTATCTTTAGGACTTTGATGATGACCTTTATGGTTAGTATTTGATGTTAGAAAGTATTACAGATAGCTTTATGGATTTAAGATTCATTGTTAACGTAAAATTTAAGAGTTCTTCACTTACTGCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGGTAAGGATAAATTCCACAAACTATTATTATTCTTCATTCTTTGAATCAGAATTCTCAATGGTTGAAATTTCTTTTGGAAAACATCAATTTTTTTAATGAATGCCGACAGAAATACTTCGCCTTCCTAGTTTAACAGTTGACTAAAGGATTAAATAAAACATACCATGTTTTGAATGTGCTATTTTCTGAACTCCATTGCTTGCGTTTTCTCTTTAGTGTAAACTTGGTTGGAGTTAATGTTCGCACCTCTGAGCTTGTATCAGTGTGTTCAAGTTCTTAGAAAAAGTGTCTTAGCATTTTTTTTCTTCTTCAATAAATTTACTTTATTATAAAACATAGATTGAAAAGCTTTTAAAACGCCATTTTGTCACAAGTTCTTACATTCTCTGATATGTATTTGCTTATGTCAAACAGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGATGTTTTTCTTGTACATGCTACATTGTCGTTTAATCGATATGTGGAAAGGAAAATCTATCGATATGTGAGTTATTAACCCCTAGGGGAGAGTGGAACATTAACAACTTAGAAGAGAACTTATGGGCCTGGATGTTGATGTAATCAGAACTATCACTGTTTGCGTCATTGATATCCTAGATTCTTGGATTTCGCATTATTCGAAGGATGGGCAATTTTTCGATAAAAAATGCTTACATGGTTTATATAAACAAAAATTGGTAGAAAATTGTTCCAACTTCGAGAGAAGTTTAAATGGTGTAAGACTTGTGGGGGTTTGATATTCCAAAAAAAGAGTATATATATGGGGATTTTTTCCCCAAAATTATCTTCCTACTAACGCTAATCTCTATAAAAAGATGTATTCTTATAAATTCTGTGTATGCACACTATGCAGTGCAATTATGAAGAGCCATAATGCAAAAAATCTTTGGAGAAGCTTTCCATATTAAGGTAGCTTATTAGGTCTATGTCATCATAAGTCTGTTGCATTATCTGGTACATTTTAGTTGCTTAAATGTATGATTAGTTAGTTCTAATTGCAGTGGTTACCGCTCGCTTACATTCGGGTCGAGATTCACTTTGGTTTGAGAGGTTGCAAGAAGAAGAGGAAATTTAAATAGTGCTCACTGTTCAGTTTCGAAGGGAAAAGTGGTGGTACAAAAACATTCAGATTTTCAGGCAACACCTAAAGAGTCCCTCCCAATAAGGTGAGAATCCCTGTAGGAGTTTTCAAGCATTTGATTTGGTGAATGTGATGTAGGTTCTGAGTAAATGAATGCTTAAGAAAAGTAAAGTTTGTGTTGGAATATGATTTGTATGTGAAAGGAAATTGGAATTTGATTAAACTGTTGAAGGTTGCTGCATACATCTTTACAAGGCTTTGAATGCTGATGTTCATATGGAATGTGTGTTGTTTAGTTGGATATATGACAATTAATTTAATGAATGCTGTTGGTTTGTTGTCTA

mRNA sequence

GTAATAGTTGTGGGGTGGAGGCGGAGAGAAATAGAAGAATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGATGTTTTTCTTGTACATGCTACATTGTCGTTTAATCGATATGTGGAAAGGAAAATCTATCGATATGTGAGTTATTAACCCCTAGGGGAGAGTGGAACATTAACAACTTAGAAGAGAACTTATGGGCCTGGATGTTGATGTAATCAGAACTATCACTGTTTGCGTCATTGATATCCTAGATTCTTGGATTTCGCATTATTCGAAGGATGGGCAATTTTTCGATAAAAAATGCTTACATGGTTTATATAAACAAAAATTGGTAGAAAATTGTTCCAACTTCGAGAGAAGTTTAAATGGTGTAAGACTTGTGGGGGTTTGATATTCCAAAAAAAGAGTATATATATGGGGATTTTTTCCCCAAAATTATCTTCCTACTAACGCTAATCTCTATAAAAAGATGTATTCTTATAAATTCTGTGTATGCACACTATGCAGTGCAATTATGAAGAGCCATAATGCAAAAAATCTTTGGAGAAGCTTTCCATATTAAGGTAGCTTATTAGGTCTATGTCATCATAAGTCTGTTGCATTATCTGGTACATTTTAGTTGCTTAAATGTATGATTAGTTAGTTCTAATTGCAGTGGTTACCGCTCGCTTACATTCGGGTCGAGATTCACTTTGGTTTGAGAGGTTGCAAGAAGAAGAGGAAATTTAAATAGTGCTCACTGTTCAGTTTCGAAGGGAAAAGTGGTGGTACAAAAACATTCAGATTTTCAGGCAACACCTAAAGAGTCCCTCCCAATAAGGTGAGAATCCCTGTAGGAGTTTTCAAGCATTTGATTTGGTGAATGTGATGTAGGTTCTGAGTAAATGAATGCTTAAGAAAAGTAAAGTTTGTGTTGGAATATGATTTGTATGTGAAAGGAAATTGGAATTTGATTAAACTGTTGAAGGTTGCTGCATACATCTTTACAAGGCTTTGAATGCTGATGTTCATATGGAATGTGTGTTGTTTAGTTGGATATATGACAATTAATTTAATGAATGCTGTTGGTTTGTTGTCTA

Coding sequence (CDS)

ATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGA

Protein sequence

MQCSCISLSSTLKLGPNSISKSKLSSSVSLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKHS

Homology

[Close]

BLAST of Sed0016887.2 vs. NCBI nr
Match: XP_022991844.1 (uncharacterized protein LOC111488367 [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 5.7e-156
Identity = 284/331 (85.80%), Postives = 297/331 (89.73%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSSS-----------VSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS+           +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSNLKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTL CLLLLDEVEVPE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLACLLLLDEVEVPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV+KKLSGM+S ESID IALMRIPDSFC +DGN K+AH KTWFPS HRILVL+
Sbjct: 121 RIVRVSPTVMKKLSGMQSIESIDAIALMRIPDSFCSLDGNLKQAHSKTWFPSPHRILVLD 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK +F+MKMLAGHPESNE KPVSVLSQQFANS KD  LCL+LGSEGSGLSEKSW VCELL
Sbjct: 241 LKTDFQMKMLAGHPESNELKPVSVLSQQFANSSKDISLCLVLGSEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPM GGFESLNVSVAGGIFLYMLQAEN +H
Sbjct: 301 SIPMVGGFESLNVSVAGGIFLYMLQAENDRH 330

[Close]

BLAST of Sed0016887.2 vs. NCBI nr
Match: KAG6600682.1 (hypothetical protein SDJN03_05915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 559.3 bits (1440), Expect = 2.2e-155
Identity = 283/331 (85.50%), Postives = 296/331 (89.43%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSSTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+M+MLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMEMLAGHPESNELKPVSVLSQQFANSWKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAANDRH 330

[Close]

BLAST of Sed0016887.2 vs. NCBI nr
Match: XP_022136373.1 (uncharacterized protein LOC111008099 [Momordica charantia])

HSP 1 Score: 558.5 bits (1438), Expect = 3.7e-155
Identity = 281/330 (85.15%), Postives = 297/330 (90.00%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLS----------SSVSLPSHVKAITSTSNPFVKHCVK 60
           MQCSCI  S+ LKLGP SISKSK+S            +SLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGP-SISKSKVSIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVR 120
           LRFSSSYRHFHGSVL+VGATPIREIC+FQE+LHG + TLECLLLLDEV+VPEGLVD+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEG 180
           IVRVS TV+KKLSGM+STESID IALMRIP SF  V  NEKEA+F+ WFPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVL 240
           IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE L
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEAL 240

Query: 241 KNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLS 300
           KNEF+MKMLAGHPESNEPKPVS LSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELLS
Sbjct: 241 KNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           IPMAGGFESLNVSVAGGIFLYMLQ ENH H
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQNENHTH 329

[Close]

BLAST of Sed0016887.2 vs. NCBI nr
Match: XP_022941807.1 (uncharacterized protein LOC111447061 [Cucurbita moschata])

HSP 1 Score: 558.1 bits (1437), Expect = 4.8e-155
Identity = 283/332 (85.24%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRF+SSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLED 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKHS 322
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H+
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAVNDRHT 331

[Close]

BLAST of Sed0016887.2 vs. NCBI nr
Match: XP_038904874.1 (uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida])

HSP 1 Score: 557.8 bits (1436), Expect = 6.3e-155
Identity = 282/331 (85.20%), Postives = 299/331 (90.33%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS LKLGP S SKSKLSS            VSLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCVSWSSNLKLGP-SFSKSKLSSINQAETIDFAARVSLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRH+HG+VL+VGATPIREICKFQESLHGI+CTLECLLLLD+VEVPEGLVD SV
Sbjct: 61  KLRFSSSYRHYHGTVLVVGATPIREICKFQESLHGITCTLECLLLLDDVEVPEGLVDKSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV++KLSGM+STESID IALMRIP SFC VDGNEK+  FK  FPS HRILVLE
Sbjct: 121 RIVRVSPTVMRKLSGMQSTESIDAIALMRIPASFCSVDGNEKDIDFKRCFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDP+NEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPYNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LKN+F+MKMLAGHPESNEPK VSVLSQQFANS+K+FPLCL+LG EGSGLS KSW VCELL
Sbjct: 241 LKNKFQMKMLAGHPESNEPKRVSVLSQQFANSLKEFPLCLVLGCEGSGLSGKSWHVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPMAGGFESLNVSVAGGIFLYMLQAEN+ H
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENNSH 330

[Close]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot
Match: P74261 (Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1673 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 94/289 (32.53%), Postives = 135/289 (46.71%), Query Frame = 0


Query: 30  LPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTL 89
           L S + +ITST NP VK   +L   +  R   G +LL G T + E+   Q       C  
Sbjct: 4   LTSDIASITSTQNPLVKQLRQLH-QTKGRKQQGQLLLEG-THLLEVALAQGKGFNHGCFT 63

Query: 90  ECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGN 149
                 + V + + L+  SV    VS  VL K   M ST + D +      D F      
Sbjct: 64  AMWQEKNPV-LADRLMAQSVHSYLVSGEVLAK---MASTVNPDGVVATLTMDQF------ 123

Query: 150 EKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRA 209
                +++  P     LVLE +QDPGNLGT++R+A A    G++L   C DP + K LR+
Sbjct: 124 -----WRSPPPHARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRS 183

Query: 210 SRGASFQLPIVSGTWNHLEVLKNEFE---MKMLAGHPESNEPKPVSVLSQQFANSMKDFP 269
           S G+S  LP        L  L  +F    ++++A  P++ +    ++    F       P
Sbjct: 184 SAGSSLLLP--QQQLQSLPPLLEKFHTQGLQLIATVPQATQ----TLWEIDFQR-----P 243

Query: 270 LCLILGSEGSGLSEKSWGVCEL----LSIPMAGGFESLNVSVAGGIFLY 312
             +I GSEG GLS     V EL    ++IP A   ESLNV++A G+ LY
Sbjct: 244 TIVIFGSEGQGLSAP---VLELTTHQVAIPQAPQVESLNVAIAVGVMLY 261

[Close]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot
Match: P94538 (Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 168) OX=224308 GN=ysgA PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 161 STHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIV 220
           +  ++L+++ +QDPGNLGT+IR+A A   + V L  G  D FN K LR+++G+ F +P+V
Sbjct: 102 TARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRSAQGSHFHIPVV 161

Query: 221 SGTW-NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLS 280
                ++++ LK E  +K+     ++  P      S+ FA         LI+G+EG+G+ 
Sbjct: 162 RRNLPSYVDELKAE-GVKVYGTALQNGAPYQEIPQSESFA---------LIVGNEGAGVD 221

Query: 281 EKSWGVCEL-LSIPMAGGFESLNVSVAGGIFLYMLQ 315
                  +L L +P+ G  ESLNV+VA  I +Y L+
Sbjct: 222 AALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247

[Close]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot
Match: Q9VW14 (rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG14100 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 159 FPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLP 218
           FP T   +V + I++P NLG++IR+  A   + V +  GCCDP+  KALR   G  F++P
Sbjct: 234 FPIT---VVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVP 293

Query: 219 IVSG-TWNHLEV-LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPL--CLILGSE 278
           I    TW+ L + +  E          E+N+ K  +  +  +A+ +K       LI+G E
Sbjct: 294 IRDDVTWDELALTIPPEAADDCHVFIAETNQRKRENNQTIDYAD-IKGLGAHNLLIIGGE 353

Query: 279 GSGLSEKSW-------GVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 315
             G+SE+++       G  + + IP+A G +SLNV+ A  + L+ L+
Sbjct: 354 SHGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELR 396

[Close]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot
Match: A0PV26 (Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=MUL_4155 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 165 ILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 224
           ++ L+ I DP NLG ++RS  AF  +GV +           A R S GA+ ++P+   T 
Sbjct: 163 LVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARAT- 222

Query: 225 NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 284
           N    LK+  +  +     ++     +  L           P+ +++GSEG GLS     
Sbjct: 223 NLTRALKDWADRGVRVVGLDAGGDTAIDDLD-------GSDPIVVVVGSEGKGLSRLVRQ 282

Query: 285 VC-ELLSIPMAGGFESLNVSVAGGIFL 311
            C E++S+PMAG  ESLN SVA G+ L
Sbjct: 283 TCDEVVSVPMAGPTESLNASVAAGVVL 301

[Close]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot
Match: B2HJ20 (Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=MMAR_5079 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 165 ILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 224
           ++ L+ I DP NLG ++RS  AF  +GV +           A R S GA+ ++P+   T 
Sbjct: 163 LVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARAT- 222

Query: 225 NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 284
           N    LK+  +  +     ++     +  L           P+ +++GSEG GLS     
Sbjct: 223 NLTRALKDWADRGVRVVGLDAGGDTAIDDLD-------GSDPIVVVVGSEGKGLSRLVRQ 282

Query: 285 VC-ELLSIPMAGGFESLNVSVAGGIFL 311
            C E++S+PMAG  ESLN SVA G+ L
Sbjct: 283 TCDEVVSVPMAGPTESLNASVAAGVVL 301

[Close]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL
Match: A0A6J1JVY6 (uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.7e-156
Identity = 284/331 (85.80%), Postives = 297/331 (89.73%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSSS-----------VSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS+           +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSNLKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTL CLLLLDEVEVPE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLACLLLLDEVEVPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV+KKLSGM+S ESID IALMRIPDSFC +DGN K+AH KTWFPS HRILVL+
Sbjct: 121 RIVRVSPTVMKKLSGMQSIESIDAIALMRIPDSFCSLDGNLKQAHSKTWFPSPHRILVLD 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK +F+MKMLAGHPESNE KPVSVLSQQFANS KD  LCL+LGSEGSGLSEKSW VCELL
Sbjct: 241 LKTDFQMKMLAGHPESNELKPVSVLSQQFANSSKDISLCLVLGSEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPM GGFESLNVSVAGGIFLYMLQAEN +H
Sbjct: 301 SIPMVGGFESLNVSVAGGIFLYMLQAENDRH 330

[Close]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL
Match: A0A6J1C7F0 (uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008099 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.8e-155
Identity = 281/330 (85.15%), Postives = 297/330 (90.00%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLS----------SSVSLPSHVKAITSTSNPFVKHCVK 60
           MQCSCI  S+ LKLGP SISKSK+S            +SLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGP-SISKSKVSIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVR 120
           LRFSSSYRHFHGSVL+VGATPIREIC+FQE+LHG + TLECLLLLDEV+VPEGLVD+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEG 180
           IVRVS TV+KKLSGM+STESID IALMRIP SF  V  NEKEA+F+ WFPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVL 240
           IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE L
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEAL 240

Query: 241 KNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLS 300
           KNEF+MKMLAGHPESNEPKPVS LSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELLS
Sbjct: 241 KNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           IPMAGGFESLNVSVAGGIFLYMLQ ENH H
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQNENHTH 329

[Close]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL
Match: A0A6J1FNI0 (uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC111447061 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155
Identity = 283/332 (85.24%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRF+SSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLED 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKHS 322
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H+
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAVNDRHT 331

[Close]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL
Match: A0A5D3DF85 (Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001150 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 277/327 (84.71%), Postives = 292/327 (89.30%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS  KLGP S  KSKLSS            +SLPSHVKAI+S SNPFVKHCV
Sbjct: 1   MQCSCLSWSSNPKLGP-SFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSV++VGATPIREICKFQESLHGI+CTLE LLLLDEVEVPEGLV+++V
Sbjct: 61  KLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS  V+KKLSG++STESID IALMRIP SFC VDGNEK   FK WFPS HRILVLE
Sbjct: 121 RIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
            K EF+MKMLAGHPESNEPKPVSVLSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELL
Sbjct: 241 FKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 317
           SIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL
Match: A0A1S3BNM2 (uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491842 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 277/327 (84.71%), Postives = 292/327 (89.30%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS  KLGP S  KSKLSS            +SLPSHVKAI+S SNPFVKHCV
Sbjct: 1   MQCSCLSWSSNPKLGP-SFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSV++VGATPIREICKFQESLHGI+CTLE LLLLDEVEVPEGLV+++V
Sbjct: 61  KLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS  V+KKLSG++STESID IALMRIP SFC VDGNEK   FK WFPS HRILVLE
Sbjct: 121 RIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
            K EF+MKMLAGHPESNEPKPVSVLSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELL
Sbjct: 241 FKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 317
           SIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of Sed0016887.2 vs. TAIR 10
Match: AT4G38020.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 405.2 bits (1040), Expect = 4.8e-113
Identity = 197/293 (67.24%), Postives = 242/293 (82.59%), Query Frame = 0


Query: 25  SSSVSLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHG 84
           ++ VSLPSHV +ITST+NPFVKHC+KLR SSSYRH HGSVL+VG  PIRE+C FQ +  G
Sbjct: 57  ANRVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQG 116

Query: 85  ISCTLECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFC 144
           ++  +ECLLL +E ++P+GL  +S+RIVRVS  V+KKLSG++STES++ IALMRIP SF 
Sbjct: 117 MTTEIECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFT 176

Query: 145 CV-DGNEKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFN 204
            + D  +       WFPS HR+LVL+ IQDPGNLGTL+RSA+AF W+G FLLPGCCDP+N
Sbjct: 177 DLKDDKDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYN 236

Query: 205 EKALRASRGASFQLPIVSGTWNHLEVLKNEFEMKMLAGHP--ESNEPKPVSVLSQQFANS 264
           +KALRASRGASFQLPIVSG WNHL++L+NEF+MK+LAGHP   + + KPVS LS +FA S
Sbjct: 237 DKALRASRGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLSVEFAQS 296

Query: 265 MKDFPLCLILGSEGSGLSEKSWGVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 315
           + + PLCLILGSEG+GLSE++  VC L+SIPMAG FESLNVSVAGGIFLYMLQ
Sbjct: 297 LAEKPLCLILGSEGNGLSEQARKVCVLVSIPMAGDFESLNVSVAGGIFLYMLQ 349

[Close]

BLAST of Sed0016887.2 vs. TAIR 10
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06
Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 166 LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWN 225
           LV+EG+ D GN+    RSA A     V ++   CD  + K    +R  S    + +  W 
Sbjct: 157 LVVEGLSDFGNISAAFRSADALGIQSVHVV--SCD--SSKRYNGNRHVS----MGAEKWL 216

Query: 226 HLEVLKNEFE-MKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 285
            +E      E  K+L           + + +    +     P  +++G+EG G+S+++  
Sbjct: 217 DIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALE 276

Query: 286 VCEL-LSIPMAGGFESLNVSVAGGIFLY 312
           + +L  SIPM G  +S NVSVA GI ++
Sbjct: 277 LSDLRCSIPMNGMVDSFNVSVAAGILMH 296

[Close]

BLAST of Sed0016887.2 vs. TAIR 10
Match: AT2G19870.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-06
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 0


Query: 166 LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWN 225
           + L+ + DP NLG +IRSA  F   GV +      P +    +AS G S ++  +    N
Sbjct: 420 VALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAG-SLEVMELRYCKN 479

Query: 226 HLEVLKNEFE--MKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLS---E 285
            ++ L+   E   +++ G   S  PK V+ L++    S    P  L+LG+EG+GL    E
Sbjct: 480 MMQFLEASAENGWRVVGG---SVSPKAVA-LNEVLPGS----PTILVLGNEGTGLRPLVE 539

Query: 286 KSWGVCELLSIPMAG-------------GF------ESLNVSVAGGIFLYML 314
           +S      +S  M               GF      ESLNVSVA G+FL+ L
Sbjct: 540 RSCTDLVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLHHL 582

The following BLAST results are available for this feature:

BLAST of Sed0016887.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991844.1	5.7e-156	85.80	uncharacterized protein LOC111488367 [Cucurbita maxima]	[more]
KAG6600682.1	2.2e-155	85.50	hypothetical protein SDJN03_05915, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022136373.1	3.7e-155	85.15	uncharacterized protein LOC111008099 [Momordica charantia]	[more]
XP_022941807.1	4.8e-155	85.24	uncharacterized protein LOC111447061 [Cucurbita moschata]	[more]
XP_038904874.1	6.3e-155	85.20	uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida]	[more]

BLAST of Sed0016887.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P74261	1.5e-18	32.53	Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain...	[more]
P94538	4.1e-16	34.62	Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 16...	[more]
Q9VW14	2.5e-13	32.34	rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG...	[more]
A0PV26	3.6e-12	32.65	Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS=Mycobacterium ulcerans (...	[more]
B2HJ20	3.6e-12	32.65	Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS=Mycobacterium marinum (...	[more]

BLAST of Sed0016887.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVY6	2.7e-156	85.80	uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367...	[more]
A0A6J1C7F0	1.8e-155	85.15	uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1FNI0	2.3e-155	85.24	uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A5D3DF85	1.8e-152	84.71	Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BNM2	1.8e-152	84.71	uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Sed0016887.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38020.1	4.8e-113	67.24	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT5G15390.1	1.4e-06	28.38	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT2G19870.1	2.3e-06	31.40	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 36..141 e-value: 3.9E-9 score: 38.7
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 36..141
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 165..311 e-value: 3.3E-28 score: 98.6
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 154..320 e-value: 6.3E-39 score: 135.2
None	No IPR available	PANTHER	PTHR43191:SF2	RRNA METHYLTRANSFERASE 3, MITOCHONDRIAL	coord: 24..319
None	No IPR available	PANTHER	PTHR43191	RRNA METHYLTRANSFERASE 3,	coord: 24..319
None	No IPR available	CDD	cd18095	SpoU-like_rRNA-MTase	coord: 164..313 e-value: 1.52547E-54 score: 172.996
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 160..314

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0016887	Sed0016887	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016887.2-five_prime_utr	Sed0016887.2-five_prime_utr-LG07:20107475..20107512	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016887.2-exon	Sed0016887.2-exon-LG07:20107475..20107730	exon
Sed0016887.2-exon	Sed0016887.2-exon-LG07:20110756..20111053	exon
Sed0016887.2-exon	Sed0016887.2-exon-LG07:20111381..20111431	exon
Sed0016887.2-exon	Sed0016887.2-exon-LG07:20111846..20113249	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016887.2-cds	Sed0016887.2-cds-LG07:20107513..20107730	CDS
Sed0016887.2-cds	Sed0016887.2-cds-LG07:20110756..20111053	CDS
Sed0016887.2-cds	Sed0016887.2-cds-LG07:20111381..20111431	CDS
Sed0016887.2-cds	Sed0016887.2-cds-LG07:20111846..20112244	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016887.2-three_prime_utr	Sed0016887.2-three_prime_utr-LG07:20112245..20113249	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0016887.2	Sed0016887.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity