Sed0016887 (gene) Chayote v1

Overview


Name	Sed0016887
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SpoU_methylase domain-containing protein
Location	LG07: 20107475 .. 20113249 (+)
RNA-Seq Expression	Sed0016887
Synteny	Sed0016887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATAGTTGTGGGGTGGAGGCGGAGAGAAATAGAAGAATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGTCTTTCTTTATCTTTCACTTTGCCCCCTAATTTTTTGCCTTCTGCCCTTAATTTTGTTATCTATTTTCAATTAGTTTCATCGACAAATTTCATTTCCTCTCGAAGTGGGAATCCTGAACCTTTGATTTCTTTTTTAGTATTCGTTATATGGGTTAAATACTTCCCCCATTGTAGGTCCAGCGTAAAGACGGAGTGCTGTTTTGTGAATTTCCCCTGAAATGTTTGTCAGAATAATTAAGATCCCGTTTAATAACCATTTTGTTTTTTGTGTTTTATTTATGAAATTTAAGCCTACAATAAATACCTTACCGTATATTTTTCCTTATTTGGATAACTACATCTTACCTTTATTTTGATAAACAAAACCAAAATTTGGAAACAAAAAAGCTTGTTTTTGTTTTTGAAATTTGGATAGTATTCACCTACTTTATTAAGAAAATATGGATACATTGTGGGAAAGATGGAGCACATGATAGGAAATTTGAGTAGAAATAAACTTAAATTTCATAAATAAAAAACAATAAACCAAATGATTATCAAACGGGGCATAAGTTCTTGGGTGCCAATAAGAGCATACCTCTAGTGACATCTTGTATAATCAAGTAAAATATATATTTTTTTGTATAGCTCGATACATATCAATCCGAAGCTTTGAGAAAGTTGGACATCCAATTTCAAGTCCTAAGAGGAGAGGGCTTGTAAATCTGAGGGATTATCTCATGAATAAACTATACATCCGAGAGGAAAGAAAGAACTCTTATACCCTGCATCAGAACTGGCCATAGGAAAAAGGGAAGATCATGACTCATCCCATATTGGTGTCAAAAGGTGAAATGTGTGGAGAAGACGTGCGATTCATTGTCGATTAGATCGGCAAAAGATGGGGTGAGTTACCAAAGCTTCAGAAAGAGGACTCACGGTTCACTACTTTAGCTGAGAAGAGGCTGTAGAATAAAAAAGTCGCCAGGAAAGGGTGCATCAAGGCAAGGAACTCACACGGTTCTCCAGCACACAAGCCAGTTCTCATGTTCAACACTCGGACAACATTGGAGTTGAGGAGCAATGTCAAGAAACGCACACAAAAATAGATACTAGTTGCCAAAGTTGAGGGGAGCTATTATTGCTCGCACAACTTTCACTGCAAACGACAGGCTTTCAAAGACTGACCAACATCGGTGTTAAGGAGCAACGTCGCGTGAAGTTCAATCAACTGATTGGACTATGAAACCCCCTAAAAAATTGGGAAAAATGAAACAATTTGTGTGCACCAAACTGTTTGGTGGATTGGATCGATCAACACAGATCGAACTGGTCTATTACAAAATATTGTTTCAATCAGGGCCATATCAAGGAAGAAAGGCATCACCGCCGTTGACCCTTCGGGAGTTCTCACACACCCTTTGGCATGCTCTAAAGACGCATGTGAAACCAAGAAAGTTGCATTGTGTGAGTCTTGAAAGATGCTCGAAGGGTCACGTGATGCCTCGCCCAGTGTTTTAAAAAGCCCCGTCAGGCGCGCGCCTAGGCCCAAGGCGCACCTCTTGTGCCTCGCCTGGGAAAGACGAGGCGCTCGCCTTTTGGCGCCTTACGTGAAGACCCGGGCGCCAAAAGGCGCGCGCCTTGGGGGCTTTTTTTTATTTTCTTTATATTTTTTCATGTTTTCACCTTTATCCTTTGTGAGATCCCTGTACTAGGTCATTCAAAGTGCAAGATAACTAATTCAAGACATTTCAATACCTTAAATAACTTAATTCTTCAACTCACAAAGACAACATTCGCTTAAATGAAAGGTTAATAGTTGAAGCTTATGTATGTTTTGTATATATTCTTAGTTAAACTTCATTTCTTTCCATGAAATGAAGGTTAATAGTTAAATGTAATTTATGTTTTGTATATTATTCTTGGTTAAAACTTTATTTATGTCTATGGAAATGTGTATACACACACACATATATATATATATATATATATATATATATATATAAAATTTGTGTTTTTTATATAGTGCGCCTGATGTAAACCTGCGCCTTATGGTGCACCTCAGGCCCCAGAGGCCCATTGCGCCTTTGTGCGCCTTGGGCTTTTTAAAACACCTGGCCTCGCCAGACATGATGGCGGTTTGTAGCTAGAAACACTGCAAAGATCACAAAGCCTTGCCAAACCACTGTGAACCTCGTCAGAACGCTGGAATAAATTGTGGTTTGAGTCCATATCTGTAAATCGGCCAGTCCGTAAATTTTTTTTGTGTATTTACCATTGATGATGGGAAATGGAGGAGGAAAAGGGGTTGTTATCACCATTGGGATGGTCATGTCGATGTTCCTCCTCCAGCACCGGTGAGGAGCGGTGCTAGAGTGGGAGGGAGATATTTTGCTTAGGGTTTTGCTGCGAGAGTTTAGAGAGAGGGAGATTAAAAGGTTACAAGTGCGAATCTCTCCTCTCCACAAATGTTGAATTAAAAAAAAGAAGAATTAAGTTCTTGGAATCAGGTCTAACGTAATAGCAAGCTTGTGATCGAATATTTTTGAAGCATCCTTAAGCATCCTCCAGAGTTTTATTTGTTTGTGGGTGTTCTCTGATTGAACTACAATGTAGTTTCAGTTTTTTTAACTTTTGAAACTCGATATTAATTTGCTAAAGGAAGTTGCTGGAGTTATGTAGAAATTATGCTTTCTTTCATCAACTTCTGCATAGATTCACTCTTGTGAAGTCAAATTTGTTGTTATGGTTGTTTTGTTTAGTTTACAGATTACTCTGTTTATAGTTTGCAAAGAAGCCAATCCTATTTCATCTCTTTTGTGGAAGCTTGCCGATATTGCTGTTCATTTCTAATTGGAATGAGAATTGTTGAAATTTTATGTAAACTATTTTCTTCTTATCGATTCCAATCATTTCAATTCAATCTTTTTGTAGCATAACAAATATGATCTAATGCTCTTCCTTTGTGACATTATTTGTGGTAAAATGGTTTGCTCGACTTCATAAGGTTTACATGCACTTACATCTAATCTTGGTCTTTTACAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGTAATTCTATCATCTAACTATCCTGTTTCTAAGTTCTTACGAAGTATGTATCATTCCCTCCATTTCATTCCATAACTACTTGCTAAGATGCCTTTTATACCTTGTATTGAGCTATCACTCTATGGTATTTTCTTGTGCATATTGACATCACAATAGTTTCCATATACTCATCCATAAAGATAAAATGATCTATTGTCTTAATTTATCTTTAGGACTTTGATGATGACCTTTATGGTTAGTATTTGATGTTAGAAAGTATTACAGATAGCTTTATGGATTTAAGATTCATTGTTAACGTAAAATTTAAGAGTTCTTCACTTACTGCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGGTAAGGATAAATTCCACAAACTATTATTATTCTTCATTCTTTGAATCAGAATTCTCAATGGTTGAAATTTCTTTTGGAAAACATCAATTTTTTTAATGAATGCCGACAGAAATACTTCGCCTTCCTAGTTTAACAGTTGACTAAAGGATTAAATAAAACATACCATGTTTTGAATGTGCTATTTTCTGAACTCCATTGCTTGCGTTTTCTCTTTAGTGTAAACTTGGTTGGAGTTAATGTTCGCACCTCTGAGCTTGTATCAGTGTGTTCAAGTTCTTAGAAAAAGTGTCTTAGCATTTTTTTTCTTCTTCAATAAATTTACTTTATTATAAAACATAGATTGAAAAGCTTTTAAAACGCCATTTTGTCACAAGTTCTTACATTCTCTGATATGTATTTGCTTATGTCAAACAGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGATGTTTTTCTTGTACATGCTACATTGTCGTTTAATCGATATGTGGAAAGGAAAATCTATCGATATGTGAGTTATTAACCCCTAGGGGAGAGTGGAACATTAACAACTTAGAAGAGAACTTATGGGCCTGGATGTTGATGTAATCAGAACTATCACTGTTTGCGTCATTGATATCCTAGATTCTTGGATTTCGCATTATTCGAAGGATGGGCAATTTTTCGATAAAAAATGCTTACATGGTTTATATAAACAAAAATTGGTAGAAAATTGTTCCAACTTCGAGAGAAGTTTAAATGGTGTAAGACTTGTGGGGGTTTGATATTCCAAAAAAAGAGTATATATATGGGGATTTTTTCCCCAAAATTATCTTCCTACTAACGCTAATCTCTATAAAAAGATGTATTCTTATAAATTCTGTGTATGCACACTATGCAGTGCAATTATGAAGAGCCATAATGCAAAAAATCTTTGGAGAAGCTTTCCATATTAAGGTAGCTTATTAGGTCTATGTCATCATAAGTCTGTTGCATTATCTGGTACATTTTAGTTGCTTAAATGTATGATTAGTTAGTTCTAATTGCAGTGGTTACCGCTCGCTTACATTCGGGTCGAGATTCACTTTGGTTTGAGAGGTTGCAAGAAGAAGAGGAAATTTAAATAGTGCTCACTGTTCAGTTTCGAAGGGAAAAGTGGTGGTACAAAAACATTCAGATTTTCAGGCAACACCTAAAGAGTCCCTCCCAATAAGGTGAGAATCCCTGTAGGAGTTTTCAAGCATTTGATTTGGTGAATGTGATGTAGGTTCTGAGTAAATGAATGCTTAAGAAAAGTAAAGTTTGTGTTGGAATATGATTTGTATGTGAAAGGAAATTGGAATTTGATTAAACTGTTGAAGGTTGCTGCATACATCTTTACAAGGCTTTGAATGCTGATGTTCATATGGAATGTGTGTTGTTTAGTTGGATATATGACAATTAATTTAATGAATGCTGTTGGTTTGTTGTCTA

mRNA sequence

GTAATAGTTGTGGGGTGGAGGCGGAGAGAAATAGAAGAATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGATGTTTTTCTTGTACATGCTACATTGTCGTTTAATCGATATGTGGAAAGGAAAATCTATCGATATGTGAGTTATTAACCCCTAGGGGAGAGTGGAACATTAACAACTTAGAAGAGAACTTATGGGCCTGGATGTTGATGTAATCAGAACTATCACTGTTTGCGTCATTGATATCCTAGATTCTTGGATTTCGCATTATTCGAAGGATGGGCAATTTTTCGATAAAAAATGCTTACATGGTTTATATAAACAAAAATTGGTAGAAAATTGTTCCAACTTCGAGAGAAGTTTAAATGGTGTAAGACTTGTGGGGGTTTGATATTCCAAAAAAAGAGTATATATATGGGGATTTTTTCCCCAAAATTATCTTCCTACTAACGCTAATCTCTATAAAAAGATGTATTCTTATAAATTCTGTGTATGCACACTATGCAGTGCAATTATGAAGAGCCATAATGCAAAAAATCTTTGGAGAAGCTTTCCATATTAAGTGGTTACCGCTCGCTTACATTCGGGTCGAGATTCACTTTGGTTTGAGAGGTTGCAAGAAGAAGAGGAAATTTAAATAGTGCTCACTGTTCAGTTTCGAAGGGAAAAGTGGTGGTACAAAAACATTCAGATTTTCAGGCAACACCTAAAGAGTCCCTCCCAATAAGGTGAGAATCCCTGTAGGAGTTTTCAAGCATTTGATTTGGTGAATGTGATGTAGGTTCTGAGTAAATGAATGCTTAAGAAAAGTAAAGTTTGTGTTGGAATATGATTTGTATGTGAAAGGAAATTGGAATTTGATTAAACTGTTGAAGGTTGCTGCATACATCTTTACAAGGCTTTGAATGCTGATGTTCATATGGAATGTGTGTTGTTTAGTTGGATATATGACAATTAATTTAATGAATGCTGTTGGTTTGTTGTCTA

Coding sequence (CDS)

ATGCAATGCTCCTGCATTTCGTTGTCCTCAACTCTGAAGCTCGGACCTAATTCCATTTCTAAATCGAAGCTTTCATCATCAGTTTCACTTCCTTCTCATGTGAAAGCCATCACCAGTACCTCCAACCCCTTCGTTAAGCACTGCGTTAAACTCCGCTTCAGCTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCCTCGTCGGCGCTACCCCAATAAGGGAAATATGCAAATTTCAAGAGTCTCTGCATGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGGTTCCTGAAGGACTAGTTGATATATCTGTTCGTATCGTGCGGGTGAGCCTAACTGTGTTGAAAAAGCTTTCTGGCATGGAATCAACAGAATCTATTGATGTAATTGCCCTCATGAGAATACCCGACAGTTTTTGTTGTGTAGATGGCAATGAAAAAGAAGCACACTTTAAGACATGGTTTCCATCTACACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTGGGTACATTAATCAGATCTGCTTTGGCCTTCAAGTGGAATGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCGTTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGGTTCTAAAAAATGAATTCGAAATGAAAATGCTTGCTGGCCATCCTGAAAGTAATGAACCGAAGCCTGTTTCGGTCCTTTCACAACAGTTTGCAAATTCAATGAAAGACTTTCCATTGTGCTTAATTTTGGGCAGTGAAGGGAGTGGTCTTTCTGAGAAATCTTGGGGGGTTTGCGAGCTTTTGAGCATTCCAATGGCAGGTGGTTTTGAGTCTCTTAACGTCTCGGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAATCATAAGCATAGTTGA

Protein sequence

MQCSCISLSSTLKLGPNSISKSKLSSSVSLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKHS

Homology

[Close]

BLAST of Sed0016887 vs. NCBI nr
Match: XP_022991844.1 (uncharacterized protein LOC111488367 [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 5.7e-156
Identity = 284/331 (85.80%), Postives = 297/331 (89.73%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSSS-----------VSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS+           +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSNLKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTL CLLLLDEVEVPE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLACLLLLDEVEVPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV+KKLSGM+S ESID IALMRIPDSFC +DGN K+AH KTWFPS HRILVL+
Sbjct: 121 RIVRVSPTVMKKLSGMQSIESIDAIALMRIPDSFCSLDGNLKQAHSKTWFPSPHRILVLD 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK +F+MKMLAGHPESNE KPVSVLSQQFANS KD  LCL+LGSEGSGLSEKSW VCELL
Sbjct: 241 LKTDFQMKMLAGHPESNELKPVSVLSQQFANSSKDISLCLVLGSEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPM GGFESLNVSVAGGIFLYMLQAEN +H
Sbjct: 301 SIPMVGGFESLNVSVAGGIFLYMLQAENDRH 330

[Close]

BLAST of Sed0016887 vs. NCBI nr
Match: KAG6600682.1 (hypothetical protein SDJN03_05915, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 559.3 bits (1440), Expect = 2.2e-155
Identity = 283/331 (85.50%), Postives = 296/331 (89.43%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSSTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+M+MLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMEMLAGHPESNELKPVSVLSQQFANSWKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAANDRH 330

[Close]

BLAST of Sed0016887 vs. NCBI nr
Match: XP_022136373.1 (uncharacterized protein LOC111008099 [Momordica charantia])

HSP 1 Score: 558.5 bits (1438), Expect = 3.7e-155
Identity = 281/330 (85.15%), Postives = 297/330 (90.00%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLS----------SSVSLPSHVKAITSTSNPFVKHCVK 60
           MQCSCI  S+ LKLGP SISKSK+S            +SLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGP-SISKSKVSIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVR 120
           LRFSSSYRHFHGSVL+VGATPIREIC+FQE+LHG + TLECLLLLDEV+VPEGLVD+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEG 180
           IVRVS TV+KKLSGM+STESID IALMRIP SF  V  NEKEA+F+ WFPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVL 240
           IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE L
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEAL 240

Query: 241 KNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLS 300
           KNEF+MKMLAGHPESNEPKPVS LSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELLS
Sbjct: 241 KNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           IPMAGGFESLNVSVAGGIFLYMLQ ENH H
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQNENHTH 329

[Close]

BLAST of Sed0016887 vs. NCBI nr
Match: XP_022941807.1 (uncharacterized protein LOC111447061 [Cucurbita moschata])

HSP 1 Score: 558.1 bits (1437), Expect = 4.8e-155
Identity = 283/332 (85.24%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRF+SSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLED 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKHS 322
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H+
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAVNDRHT 331

[Close]

BLAST of Sed0016887 vs. NCBI nr
Match: XP_038904874.1 (uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida])

HSP 1 Score: 557.8 bits (1436), Expect = 6.3e-155
Identity = 282/331 (85.20%), Postives = 299/331 (90.33%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS LKLGP S SKSKLSS            VSLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCVSWSSNLKLGP-SFSKSKLSSINQAETIDFAARVSLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRH+HG+VL+VGATPIREICKFQESLHGI+CTLECLLLLD+VEVPEGLVD SV
Sbjct: 61  KLRFSSSYRHYHGTVLVVGATPIREICKFQESLHGITCTLECLLLLDDVEVPEGLVDKSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV++KLSGM+STESID IALMRIP SFC VDGNEK+  FK  FPS HRILVLE
Sbjct: 121 RIVRVSPTVMRKLSGMQSTESIDAIALMRIPASFCSVDGNEKDIDFKRCFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDP+NEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPYNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LKN+F+MKMLAGHPESNEPK VSVLSQQFANS+K+FPLCL+LG EGSGLS KSW VCELL
Sbjct: 241 LKNKFQMKMLAGHPESNEPKRVSVLSQQFANSLKEFPLCLVLGCEGSGLSGKSWHVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPMAGGFESLNVSVAGGIFLYMLQAEN+ H
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENNSH 330

[Close]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot
Match: P74261 (Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1673 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 94/289 (32.53%), Postives = 135/289 (46.71%), Query Frame = 0


Query: 30  LPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTL 89
           L S + +ITST NP VK   +L   +  R   G +LL G T + E+   Q       C  
Sbjct: 4   LTSDIASITSTQNPLVKQLRQLH-QTKGRKQQGQLLLEG-THLLEVALAQGKGFNHGCFT 63

Query: 90  ECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGN 149
                 + V + + L+  SV    VS  VL K   M ST + D +      D F      
Sbjct: 64  AMWQEKNPV-LADRLMAQSVHSYLVSGEVLAK---MASTVNPDGVVATLTMDQF------ 123

Query: 150 EKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRA 209
                +++  P     LVLE +QDPGNLGT++R+A A    G++L   C DP + K LR+
Sbjct: 124 -----WRSPPPHARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRS 183

Query: 210 SRGASFQLPIVSGTWNHLEVLKNEFE---MKMLAGHPESNEPKPVSVLSQQFANSMKDFP 269
           S G+S  LP        L  L  +F    ++++A  P++ +    ++    F       P
Sbjct: 184 SAGSSLLLP--QQQLQSLPPLLEKFHTQGLQLIATVPQATQ----TLWEIDFQR-----P 243

Query: 270 LCLILGSEGSGLSEKSWGVCEL----LSIPMAGGFESLNVSVAGGIFLY 312
             +I GSEG GLS     V EL    ++IP A   ESLNV++A G+ LY
Sbjct: 244 TIVIFGSEGQGLSAP---VLELTTHQVAIPQAPQVESLNVAIAVGVMLY 261

[Close]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot
Match: P94538 (Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 168) OX=224308 GN=ysgA PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 161 STHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIV 220
           +  ++L+++ +QDPGNLGT+IR+A A   + V L  G  D FN K LR+++G+ F +P+V
Sbjct: 102 TARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRSAQGSHFHIPVV 161

Query: 221 SGTW-NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLS 280
                ++++ LK E  +K+     ++  P      S+ FA         LI+G+EG+G+ 
Sbjct: 162 RRNLPSYVDELKAE-GVKVYGTALQNGAPYQEIPQSESFA---------LIVGNEGAGVD 221

Query: 281 EKSWGVCEL-LSIPMAGGFESLNVSVAGGIFLYMLQ 315
                  +L L +P+ G  ESLNV+VA  I +Y L+
Sbjct: 222 AALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247

[Close]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot
Match: Q9VW14 (rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG14100 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 159 FPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLP 218
           FP T   +V + I++P NLG++IR+  A   + V +  GCCDP+  KALR   G  F++P
Sbjct: 234 FPIT---VVCDNIREPNNLGSIIRTCAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVP 293

Query: 219 IVSG-TWNHLEV-LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPL--CLILGSE 278
           I    TW+ L + +  E          E+N+ K  +  +  +A+ +K       LI+G E
Sbjct: 294 IRDDVTWDELALTIPPEAADDCHVFIAETNQRKRENNQTIDYAD-IKGLGAHNLLIIGGE 353

Query: 279 GSGLSEKSW-------GVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 315
             G+SE+++       G  + + IP+A G +SLNV+ A  + L+ L+
Sbjct: 354 SHGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELR 396

[Close]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot
Match: A0PV26 (Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=MUL_4155 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 165 ILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 224
           ++ L+ I DP NLG ++RS  AF  +GV +           A R S GA+ ++P+   T 
Sbjct: 163 LVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARAT- 222

Query: 225 NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 284
           N    LK+  +  +     ++     +  L           P+ +++GSEG GLS     
Sbjct: 223 NLTRALKDWADRGVRVVGLDAGGDTAIDDLD-------GSDPIVVVVGSEGKGLSRLVRQ 282

Query: 285 VC-ELLSIPMAGGFESLNVSVAGGIFL 311
            C E++S+PMAG  ESLN SVA G+ L
Sbjct: 283 TCDEVVSVPMAGPTESLNASVAAGVVL 301

[Close]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot
Match: B2HJ20 (Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=MMAR_5079 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 48/147 (32.65%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 165 ILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 224
           ++ L+ I DP NLG ++RS  AF  +GV +           A R S GA+ ++P+   T 
Sbjct: 163 LVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARMPVARAT- 222

Query: 225 NHLEVLKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 284
           N    LK+  +  +     ++     +  L           P+ +++GSEG GLS     
Sbjct: 223 NLTRALKDWADRGVRVVGLDAGGDTAIDDLD-------GSDPIVVVVGSEGKGLSRLVRQ 282

Query: 285 VC-ELLSIPMAGGFESLNVSVAGGIFL 311
            C E++S+PMAG  ESLN SVA G+ L
Sbjct: 283 TCDEVVSVPMAGPTESLNASVAAGVVL 301

[Close]

BLAST of Sed0016887 vs. ExPASy TrEMBL
Match: A0A6J1JVY6 (uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.7e-156
Identity = 284/331 (85.80%), Postives = 297/331 (89.73%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSSS-----------VSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS+           +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSNLKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSVL+VGATPIREICKFQESL GISCTL CLLLLDEVEVPE LVD+SV
Sbjct: 61  KLRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLACLLLLDEVEVPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS TV+KKLSGM+S ESID IALMRIPDSFC +DGN K+AH KTWFPS HRILVL+
Sbjct: 121 RIVRVSPTVMKKLSGMQSIESIDAIALMRIPDSFCSLDGNLKQAHSKTWFPSPHRILVLD 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEA 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK +F+MKMLAGHPESNE KPVSVLSQQFANS KD  LCL+LGSEGSGLSEKSW VCELL
Sbjct: 241 LKTDFQMKMLAGHPESNELKPVSVLSQQFANSSKDISLCLVLGSEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           SIPM GGFESLNVSVAGGIFLYMLQAEN +H
Sbjct: 301 SIPMVGGFESLNVSVAGGIFLYMLQAENDRH 330

[Close]

BLAST of Sed0016887 vs. ExPASy TrEMBL
Match: A0A6J1C7F0 (uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008099 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.8e-155
Identity = 281/330 (85.15%), Postives = 297/330 (90.00%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLS----------SSVSLPSHVKAITSTSNPFVKHCVK 60
           MQCSCI  S+ LKLGP SISKSK+S            +SLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGP-SISKSKVSIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISVR 120
           LRFSSSYRHFHGSVL+VGATPIREIC+FQE+LHG + TLECLLLLDEV+VPEGLVD+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLEG 180
           IVRVS TV+KKLSGM+STESID IALMRIP SF  V  NEKEA+F+ WFPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVL 240
           IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE L
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEAL 240

Query: 241 KNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELLS 300
           KNEF+MKMLAGHPESNEPKPVS LSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELLS
Sbjct: 241 KNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQAENHKH 321
           IPMAGGFESLNVSVAGGIFLYMLQ ENH H
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQNENHTH 329

[Close]

BLAST of Sed0016887 vs. ExPASy TrEMBL
Match: A0A6J1FNI0 (uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC111447061 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155
Identity = 283/332 (85.24%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSCISL S LKLGP SISK KLSS            +SLPSHVKAITSTSNPFVKHCV
Sbjct: 1   MQCSCISLPSNLKLGP-SISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRF+SSYRHFHGSVL+VGATPIREICKFQESL GISCTLECLLLLDEVE+PE LVD+SV
Sbjct: 61  KLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           R+VRVS TV+KKLSGM+STESID IALMRIPDSF  +DGN K+AH K WFPS HRILVLE
Sbjct: 121 RVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
           GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE 
Sbjct: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLED 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
           LK EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCL+LGSEGSGLSEK W VCELL
Sbjct: 241 LKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAENHKHS 322
           SIPMAGGFESLNVSVAGGIFLYMLQA N +H+
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAVNDRHT 331

[Close]

BLAST of Sed0016887 vs. ExPASy TrEMBL
Match: A0A5D3DF85 (Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001150 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 277/327 (84.71%), Postives = 292/327 (89.30%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS  KLGP S  KSKLSS            +SLPSHVKAI+S SNPFVKHCV
Sbjct: 1   MQCSCLSWSSNPKLGP-SFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSV++VGATPIREICKFQESLHGI+CTLE LLLLDEVEVPEGLV+++V
Sbjct: 61  KLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS  V+KKLSG++STESID IALMRIP SFC VDGNEK   FK WFPS HRILVLE
Sbjct: 121 RIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
            K EF+MKMLAGHPESNEPKPVSVLSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELL
Sbjct: 241 FKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 317
           SIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of Sed0016887 vs. ExPASy TrEMBL
Match: A0A1S3BNM2 (uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491842 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 277/327 (84.71%), Postives = 292/327 (89.30%), Query Frame = 0


Query: 1   MQCSCISLSSTLKLGPNSISKSKLSS-----------SVSLPSHVKAITSTSNPFVKHCV 60
           MQCSC+S SS  KLGP S  KSKLSS            +SLPSHVKAI+S SNPFVKHCV
Sbjct: 1   MQCSCLSWSSNPKLGP-SFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCV 60

Query: 61  KLRFSSSYRHFHGSVLLVGATPIREICKFQESLHGISCTLECLLLLDEVEVPEGLVDISV 120
           KLRFSSSYRHFHGSV++VGATPIREICKFQESLHGI+CTLE LLLLDEVEVPEGLV+++V
Sbjct: 61  KLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTV 120

Query: 121 RIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFCCVDGNEKEAHFKTWFPSTHRILVLE 180
           RIVRVS  V+KKLSG++STESID IALMRIP SFC VDGNEK   FK WFPS HRILVLE
Sbjct: 121 RIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLE 180

Query: 181 GIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240
            IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV
Sbjct: 181 RIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEV 240

Query: 241 LKNEFEMKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWGVCELL 300
            K EF+MKMLAGHPESNEPKPVSVLSQQFANS+KDFPLCL+LG EGSGLSEKSW VCELL
Sbjct: 241 FKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELL 300

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 317
           SIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 SIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of Sed0016887 vs. TAIR 10
Match: AT4G38020.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 405.2 bits (1040), Expect = 4.8e-113
Identity = 197/293 (67.24%), Postives = 242/293 (82.59%), Query Frame = 0


Query: 25  SSSVSLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVLLVGATPIREICKFQESLHG 84
           ++ VSLPSHV +ITST+NPFVKHC+KLR SSSYRH HGSVL+VG  PIRE+C FQ +  G
Sbjct: 57  ANRVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQG 116

Query: 85  ISCTLECLLLLDEVEVPEGLVDISVRIVRVSLTVLKKLSGMESTESIDVIALMRIPDSFC 144
           ++  +ECLLL +E ++P+GL  +S+RIVRVS  V+KKLSG++STES++ IALMRIP SF 
Sbjct: 117 MTTEIECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFT 176

Query: 145 CV-DGNEKEAHFKTWFPSTHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFN 204
            + D  +       WFPS HR+LVL+ IQDPGNLGTL+RSA+AF W+G FLLPGCCDP+N
Sbjct: 177 DLKDDKDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYN 236

Query: 205 EKALRASRGASFQLPIVSGTWNHLEVLKNEFEMKMLAGHP--ESNEPKPVSVLSQQFANS 264
           +KALRASRGASFQLPIVSG WNHL++L+NEF+MK+LAGHP   + + KPVS LS +FA S
Sbjct: 237 DKALRASRGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLSVEFAQS 296

Query: 265 MKDFPLCLILGSEGSGLSEKSWGVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 315
           + + PLCLILGSEG+GLSE++  VC L+SIPMAG FESLNVSVAGGIFLYMLQ
Sbjct: 297 LAEKPLCLILGSEGNGLSEQARKVCVLVSIPMAGDFESLNVSVAGGIFLYMLQ 349

[Close]

BLAST of Sed0016887 vs. TAIR 10
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-06
Identity = 42/148 (28.38%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 166 LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWN 225
           LV+EG+ D GN+    RSA A     V ++   CD  + K    +R  S    + +  W 
Sbjct: 157 LVVEGLSDFGNISAAFRSADALGIQSVHVV--SCD--SSKRYNGNRHVS----MGAEKWL 216

Query: 226 HLEVLKNEFE-MKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLSEKSWG 285
            +E      E  K+L           + + +    +     P  +++G+EG G+S+++  
Sbjct: 217 DIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRGISDEALE 276

Query: 286 VCEL-LSIPMAGGFESLNVSVAGGIFLY 312
           + +L  SIPM G  +S NVSVA GI ++
Sbjct: 277 LSDLRCSIPMNGMVDSFNVSVAAGILMH 296

[Close]

BLAST of Sed0016887 vs. TAIR 10
Match: AT2G19870.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-06
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 0


Query: 166 LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWN 225
           + L+ + DP NLG +IRSA  F   GV +      P +    +AS G S ++  +    N
Sbjct: 420 VALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAG-SLEVMELRYCKN 479

Query: 226 HLEVLKNEFE--MKMLAGHPESNEPKPVSVLSQQFANSMKDFPLCLILGSEGSGLS---E 285
            ++ L+   E   +++ G   S  PK V+ L++    S    P  L+LG+EG+GL    E
Sbjct: 480 MMQFLEASAENGWRVVGG---SVSPKAVA-LNEVLPGS----PTILVLGNEGTGLRPLVE 539

Query: 286 KSWGVCELLSIPMAG-------------GF------ESLNVSVAGGIFLYML 314
           +S      +S  M               GF      ESLNVSVA G+FL+ L
Sbjct: 540 RSCTDLVRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLHHL 582

The following BLAST results are available for this feature:

BLAST of Sed0016887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991844.1	5.7e-156	85.80	uncharacterized protein LOC111488367 [Cucurbita maxima]	[more]
KAG6600682.1	2.2e-155	85.50	hypothetical protein SDJN03_05915, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022136373.1	3.7e-155	85.15	uncharacterized protein LOC111008099 [Momordica charantia]	[more]
XP_022941807.1	4.8e-155	85.24	uncharacterized protein LOC111447061 [Cucurbita moschata]	[more]
XP_038904874.1	6.3e-155	85.20	uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida]	[more]

BLAST of Sed0016887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P74261	1.5e-18	32.53	Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain...	[more]
P94538	4.1e-16	34.62	Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 16...	[more]
Q9VW14	2.5e-13	32.34	rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG...	[more]
A0PV26	3.6e-12	32.65	Uncharacterized tRNA/rRNA methyltransferase MUL_4155 OS=Mycobacterium ulcerans (...	[more]
B2HJ20	3.6e-12	32.65	Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 OS=Mycobacterium marinum (...	[more]

BLAST of Sed0016887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVY6	2.7e-156	85.80	uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367...	[more]
A0A6J1C7F0	1.8e-155	85.15	uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1FNI0	2.3e-155	85.24	uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A5D3DF85	1.8e-152	84.71	Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BNM2	1.8e-152	84.71	uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Sed0016887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38020.1	4.8e-113	67.24	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT5G15390.1	1.4e-06	28.38	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT2G19870.1	2.3e-06	31.40	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 161..303 e-value: 2.1E-25 score: 91.2
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 170..294 e-value: 1.4E-17 score: 64.2
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 36..141 e-value: 3.4E-9 score: 38.9
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 36..141
None	No IPR available	PANTHER	PTHR43191:SF2	RRNA METHYLTRANSFERASE 3, MITOCHONDRIAL	coord: 24..302
None	No IPR available	PANTHER	PTHR43191	RRNA METHYLTRANSFERASE 3,	coord: 24..302
None	No IPR available	CDD	cd18095	SpoU-like_rRNA-MTase	coord: 164..296 e-value: 2.46159E-37 score: 127.928
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 160..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016887.1	Sed0016887.1	mRNA
Sed0016887.2	Sed0016887.2	mRNA
Sed0016887.3	Sed0016887.3	mRNA
Sed0016887.4	Sed0016887.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006396	RNA processing
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity