Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACTAATGGTGAACTCTTGAAAAATGTAGATATTTTTTGAAAAATGAATAACTATTATTATTATAATTTGACAATTCAGCCCAAAATTCATATAAACCTTACAAGTAAAAAAAAAACCCATCAATCTTCGAACAGATAAGTGAATAAACACAAACACTCCCACCATTAATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGGTCTCTGCTTTCTTCTCTGTCTCTTGGTTTTTAGGGATTTGCCTTTTTGGATAGGCTTTTACGGTGGAAATATTAATGGGTTATTTCTTTATTTATTATTTATCCATTATTTTTTAGATTCATTTCATTTAAGTTTTTATACTTTCAATTTTATTTTTTCCCCATATTTAAATTTTTTTTTGTAATCCATGTAATTTCAATAACATCTAAAATTGTACTAAAAAAAATAAAAAAATCTAAAATTAATCTACATTTTTAATTTTTTAAAAATTATTTTTATTCGTTTTTTTTTTTAATTTTTAAAAGAAAACTAGTTGAAGATAGTAAATTCTTGTATCCTTATCCAATTATTAAAAACATTTCAATTTTGATGTTTTTCAATCAATTTAACTTAGTCGAAGACATCCATCTAACTTGATTGAAACTATTATTTGTTTGAATTTGATTGAAATTATGAAATGATATTTGATTTTTTTTGAAAAAAATTGAAATTCTATAGATTTTAATTTTAATTTTGTTATATATCTTTTTTTTAATTCAATAATTTACGGTGAAAAGATTATAATTCATGATCTCTAGTATATATAACATATTAATTAGTTAGTTAAATTTTGTTCACCATTAATTTTTTATTATTATTAAAAGTTGAGTGAAAATTTAAAAACTATAAAAAATAAAATAGGGGTTTAAATTATAAAGTAAGTAATGAAAAGTATCTTAATCTTATTTATTTTAAGAGTATGAAATATTTTAATGTTTAGCTGTGTAATTCAGATAAAAAGAACTTTATAGTTTTTAGGCTATTTTAAATTTATTTATAAAATAACAAGTAAATATAACAATAGTTTAATGAACCAATTATCAAAAAGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCTCGAATCCCAGCAGCCACATTATTTTTTCTTTTTCATAATGCATGTTAGAACGACCTAGTTGACATAGAGATATCCAAAGATAAAATACAGGTCAAGAGAGCTAAATTTATGTCTTTTAACTTATGAAATGAAATGTGTTAGTATTTGAATATTTGGCCACGTGTTTGGCAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAACCCTAAAATGGGATTTTCCCTTGAGTTCTACTTTTTTTGTTAAATTGTTGGAAACTCCCAATTAATATGTACAAATTTTGTTAATTTGTAACTAAGATGTACCATATGTTTTTAGGTGAGTAATTTAATATTTTGGTTGTGTCTAGAGATCGTTTATATAAATGAGGTTGAGTTATTATAACACAACCTATGTTTGGATCATTGGTTTGAAAAATCAAAATCCATCATTTCATTTAAAAATAATATCTTTTTTTGTTTCA
mRNA sequence
CTTACTAATGGTGAACTCTTGAAAAATGTAGATATTTTTTGAAAAATGAATAACTATTATTATTATAATTTGACAATTCAGCCCAAAATTCATATAAACCTTACAAGTAAAAAAAAAACCCATCAATCTTCGAACAGATAAGTGAATAAACACAAACACTCCCACCATTAATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAACCCTAAAATGGGATTTTCCCTTGAGTTCTACTTTTTTTGTTAAATTGTTGGAAACTCCCAATTAATATGTACAAATTTTGTTAATTTGTAACTAAGATGTACCATATGTTTTTAGGTGAGTAATTTAATATTTTGGTTGTGTCTAGAGATCGTTTATATAAATGAGGTTGAGTTATTATAACACAACCTATGTTTGGATCATTGGTTTGAAAAATCAAAATCCATCATTTCATTTAAAAATAATATCTTTTTTTGTTTCA
Coding sequence (CDS)
ATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAA
Protein sequence
MNFTIPILQFPQIPKALNTKIHASNSQSPLPPKPPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPSQKSR
Homology
BLAST of Sed0016408.2 vs. NCBI nr
Match:
XP_038903453.1 (uncharacterized protein LOC120090038 [Benincasa hispida])
HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 170/217 (78.34%), Postives = 186/217 (85.71%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHAS----NSQSPLPPK---PPIARNIPTMAEIVAA 60
M FTI I + PQ I + LN KIHAS NSQ PLP K P A NIPTM+EI+AA
Sbjct: 1 MEFTIIIPRIPQNFSPIHRTLNPKIHASSKCPNSQLPLPSKSLITPTAENIPTMSEILAA 60
Query: 61 GEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNRESLGM 120
G+AQNL LRLQTLGPFFRITAKS ES REIGKAEGL+R W RGK+LHL+SIRLNRESLGM
Sbjct: 61 GKAQNLGLRLQTLGPFFRITAKSLESQREIGKAEGLVRVWLRGKILHLESIRLNRESLGM 120
Query: 121 EKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS 180
EKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSG+
Sbjct: 121 EKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGT 180
Query: 181 KLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPS 207
KL DIGDM+VWGG+GTRMDA+I+ALLLKWCTRFK PS
Sbjct: 181 KLCDIGDMLVWGGIGTRMDADIKALLLKWCTRFKYPS 217
BLAST of Sed0016408.2 vs. NCBI nr
Match:
XP_008454398.1 (PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo])
HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 171/226 (75.66%), Postives = 186/226 (82.30%), Query Frame = 0
Query: 3 FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMA 62
FTI I P+IP ++ TKIHAS NSQ PLP K I NIPTMA
Sbjct: 4 FTITI---PRIPHKISPIHRTLTKIHASSSSKYPNSQLPLPSKSLITTRGQNENNIPTMA 63
Query: 63 EIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNR 122
EIVAAGE+QNL+LRLQTLGPFFRITAKS E+ REIGKAEGL+R W GK+LHLDSIRLNR
Sbjct: 64 EIVAAGESQNLSLRLQTLGPFFRITAKSLETEREIGKAEGLVRVWLGGKILHLDSIRLNR 123
Query: 123 ESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMY 182
ESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MY
Sbjct: 124 ESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMY 183
Query: 183 EVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPSQKSR 211
EVSGSKL DIGDMVVWGG+GTRMDA IE+LLLKWCTRFKSPS ++
Sbjct: 184 EVSGSKLKDIGDMVVWGGIGTRMDAPIESLLLKWCTRFKSPSSHTQ 226
BLAST of Sed0016408.2 vs. NCBI nr
Match:
XP_022149148.1 (uncharacterized protein LOC111017637 [Momordica charantia])
HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 171/222 (77.03%), Postives = 185/222 (83.33%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTM 60
M FT I + PQ IP+ L +KIHAS NSQ P P PKP +R NIPTM
Sbjct: 1 MEFTQTISRIPQNFSPIPRFL-SKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTM 60
Query: 61 AEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLN 120
EI+AAG AQNL+LRLQTLGPFFRITAKS+ES REIGKAEGLIR W G++LHLDSIRLN
Sbjct: 61 REILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGLIRVWFGGRILHLDSIRLN 120
Query: 121 RESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTM 180
RESLGMEKSIFG+GLFIGAVAIRYGFDCGC TAELLAINDSDLYHSKLVRFYTRIGFK+M
Sbjct: 121 RESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSM 180
Query: 181 YEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSP 206
YEVSGSK+GD GDM+VWGGVGTRMDA+IE LLLKWCTRFKSP
Sbjct: 181 YEVSGSKMGDFGDMLVWGGVGTRMDADIEELLLKWCTRFKSP 221
BLAST of Sed0016408.2 vs. NCBI nr
Match:
XP_022922749.1 (uncharacterized protein LOC111430648 [Cucurbita moschata])
HSP 1 Score: 316.2 bits (809), Expect = 2.1e-82
Identity = 168/227 (74.01%), Postives = 184/227 (81.06%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARN 60
M T+PI + PQ I +AL TK H ++S S PLP PKP P
Sbjct: 12 MELTVPIPRIPQNFFPIHRAL-TKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEE 71
Query: 61 IPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDS 120
PTMAEIVAAGEAQN++LRLQTLGPFFRITAKS ES REIGKAEGLIR W RG++LHLDS
Sbjct: 72 FPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 131
Query: 121 IRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIG 180
IRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 132 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 191
Query: 181 FKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPS 207
FK++YEVSGSK+GDIGDM+VWGGVGTRMDA IEALLLKWC+RFKS S
Sbjct: 192 FKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSRFKSRS 237
BLAST of Sed0016408.2 vs. NCBI nr
Match:
KAG7014938.1 (hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 315.1 bits (806), Expect = 4.6e-82
Identity = 168/227 (74.01%), Postives = 184/227 (81.06%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RN 60
M T+PI PQ I +AL TK H ++S S PLP PKPP A
Sbjct: 7 MELTVPIPLIPQNFSPIHRAL-TKFHVTSSSSSKSPNFQLPLPSKSPKPPKALIDPRGEE 66
Query: 61 IPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDS 120
PTMAEI+AAGEAQN++LRLQTLGPFFRITAKS ES REIGKAEGLIR W RG++LHLDS
Sbjct: 67 FPTMAEILAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 126
Query: 121 IRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIG 180
IRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 127 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 186
Query: 181 FKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPS 207
FK++YEVSGSK+GDIGDM+VWGGVGTRMDA IEALLLKWC+RFKS S
Sbjct: 187 FKSVYEVSGSKVGDIGDMLVWGGVGTRMDAPIEALLLKWCSRFKSRS 232
BLAST of Sed0016408.2 vs. ExPASy TrEMBL
Match:
A0A1S3BZR1 (uncharacterized protein LOC103494815 OS=Cucumis melo OX=3656 GN=LOC103494815 PE=4 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 171/226 (75.66%), Postives = 186/226 (82.30%), Query Frame = 0
Query: 3 FTIPILQFPQIPKALN------TKIHAS------NSQSPLPPKPPIA------RNIPTMA 62
FTI I P+IP ++ TKIHAS NSQ PLP K I NIPTMA
Sbjct: 4 FTITI---PRIPHKISPIHRTLTKIHASSSSKYPNSQLPLPSKSLITTRGQNENNIPTMA 63
Query: 63 EIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNR 122
EIVAAGE+QNL+LRLQTLGPFFRITAKS E+ REIGKAEGL+R W GK+LHLDSIRLNR
Sbjct: 64 EIVAAGESQNLSLRLQTLGPFFRITAKSLETEREIGKAEGLVRVWLGGKILHLDSIRLNR 123
Query: 123 ESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMY 182
ESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MY
Sbjct: 124 ESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMY 183
Query: 183 EVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPSQKSR 211
EVSGSKL DIGDMVVWGG+GTRMDA IE+LLLKWCTRFKSPS ++
Sbjct: 184 EVSGSKLKDIGDMVVWGGIGTRMDAPIESLLLKWCTRFKSPSSHTQ 226
BLAST of Sed0016408.2 vs. ExPASy TrEMBL
Match:
A0A6J1D616 (uncharacterized protein LOC111017637 OS=Momordica charantia OX=3673 GN=LOC111017637 PE=4 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 5.3e-84
Identity = 171/222 (77.03%), Postives = 185/222 (83.33%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHAS--------NSQSPLP---PKPPIAR--NIPTM 60
M FT I + PQ IP+ L +KIHAS NSQ P P PKP +R NIPTM
Sbjct: 1 MEFTQTISRIPQNFSPIPRFL-SKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTM 60
Query: 61 AEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLN 120
EI+AAG AQNL+LRLQTLGPFFRITAKS+ES REIGKAEGLIR W G++LHLDSIRLN
Sbjct: 61 REILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGLIRVWFGGRILHLDSIRLN 120
Query: 121 RESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTM 180
RESLGMEKSIFG+GLFIGAVAIRYGFDCGC TAELLAINDSDLYHSKLVRFYTRIGFK+M
Sbjct: 121 RESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSM 180
Query: 181 YEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSP 206
YEVSGSK+GD GDM+VWGGVGTRMDA+IE LLLKWCTRFKSP
Sbjct: 181 YEVSGSKMGDFGDMLVWGGVGTRMDADIEELLLKWCTRFKSP 221
BLAST of Sed0016408.2 vs. ExPASy TrEMBL
Match:
A0A6J1E4B2 (uncharacterized protein LOC111430648 OS=Cucurbita moschata OX=3662 GN=LOC111430648 PE=4 SV=1)
HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 168/227 (74.01%), Postives = 184/227 (81.06%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKP------PIARN 60
M T+PI + PQ I +AL TK H ++S S PLP PKP P
Sbjct: 12 MELTVPIPRIPQNFFPIHRAL-TKFHVNSSSSSKSPNFQLPLPSKSPKPPKTLIAPRGEE 71
Query: 61 IPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDS 120
PTMAEIVAAGEAQN++LRLQTLGPFFRITAKS ES REIGKAEGLIR W RG++LHLDS
Sbjct: 72 FPTMAEIVAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 131
Query: 121 IRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIG 180
IRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 132 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 191
Query: 181 FKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPS 207
FK++YEVSGSK+GDIGDM+VWGGVGTRMDA IEALLLKWC+RFKS S
Sbjct: 192 FKSVYEVSGSKIGDIGDMLVWGGVGTRMDAPIEALLLKWCSRFKSRS 237
BLAST of Sed0016408.2 vs. ExPASy TrEMBL
Match:
A0A0A0KT41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000740 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 163/212 (76.89%), Postives = 177/212 (83.49%), Query Frame = 0
Query: 3 FTIPILQFPQIPKALN---TKIHAS------NSQSPLPPK--PPIARNIPTMAEIVAAGE 62
FTI I + P ++ TKIHAS NSQ PLP K NIPTMAEIVAAGE
Sbjct: 4 FTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGE 63
Query: 63 AQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNRESLGMEK 122
AQNL+LRLQTLGPFFRITAKS + REIGKAEGL+R W GK+LHLDSIRLNRESLGMEK
Sbjct: 64 AQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVWLGGKILHLDSIRLNRESLGMEK 123
Query: 123 SIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKL 182
SIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKL
Sbjct: 124 SIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKL 183
Query: 183 GDIGDMVVWGGVGTRMDANIEALLLKWCTRFK 204
DIGDM+VWGG+GTRMDA I++LLLKWCTRFK
Sbjct: 184 KDIGDMLVWGGIGTRMDAPIDSLLLKWCTRFK 215
BLAST of Sed0016408.2 vs. ExPASy TrEMBL
Match:
A0A6J1JB84 (uncharacterized protein LOC111482888 OS=Cucurbita maxima OX=3661 GN=LOC111482888 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81
Identity = 165/227 (72.69%), Postives = 182/227 (80.18%), Query Frame = 0
Query: 1 MNFTIPILQFPQ----IPKALNTKIHASNSQS--------PLP---PKPPIA------RN 60
M T+PI + PQ I +AL TK H S+S S PLP PKPP A
Sbjct: 12 MELTVPIPRIPQNFSPIHRAL-TKFHVSSSSSSKSPNFQLPLPSKLPKPPKALIAPRGEE 71
Query: 61 IPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDS 120
PTMAEI+AAGEAQN++LRLQTLGPFFRITAKS ES REIGKAEGLIR W RG++LHLDS
Sbjct: 72 FPTMAEILAAGEAQNISLRLQTLGPFFRITAKSLESQREIGKAEGLIRVWLRGRILHLDS 131
Query: 121 IRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKLVRFYTRIG 180
IRL RESLGMEKSIFG+GLFIGAVAIRYG+DCGC TAELLAINDSDLYHSKLVRFYTRIG
Sbjct: 132 IRLKRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIG 191
Query: 181 FKTMYEVSGSKLGDIGDMVVWGGVGTRMDANIEALLLKWCTRFKSPS 207
F+++YEVSGS +GDIGDM+VWGGVGTRMDA IE LL KWC+RFKS S
Sbjct: 192 FESVYEVSGSNVGDIGDMLVWGGVGTRMDAPIETLLFKWCSRFKSRS 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903453.1 | 1.8e-86 | 78.34 | uncharacterized protein LOC120090038 [Benincasa hispida] | [more] |
XP_008454398.1 | 2.2e-84 | 75.66 | PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo] | [more] |
XP_022149148.1 | 1.1e-83 | 77.03 | uncharacterized protein LOC111017637 [Momordica charantia] | [more] |
XP_022922749.1 | 2.1e-82 | 74.01 | uncharacterized protein LOC111430648 [Cucurbita moschata] | [more] |
KAG7014938.1 | 4.6e-82 | 74.01 | hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BZR1 | 1.1e-84 | 75.66 | uncharacterized protein LOC103494815 OS=Cucumis melo OX=3656 GN=LOC103494815 PE=... | [more] |
A0A6J1D616 | 5.3e-84 | 77.03 | uncharacterized protein LOC111017637 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1E4B2 | 1.0e-82 | 74.01 | uncharacterized protein LOC111430648 OS=Cucurbita moschata OX=3662 GN=LOC1114306... | [more] |
A0A0A0KT41 | 2.5e-81 | 76.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000740 PE=4 SV=1 | [more] |
A0A6J1JB84 | 4.2e-81 | 72.69 | uncharacterized protein LOC111482888 OS=Cucurbita maxima OX=3661 GN=LOC111482888... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Sed0016408 | Sed0016408 | gene |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0016408.2-five_prime_utr | Sed0016408.2-five_prime_utr-LG07:9455937..9456106 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0016408.2-exon | Sed0016408.2-exon-LG07:9455937..9456556 | exon |
Sed0016408.2-exon | Sed0016408.2-exon-LG07:9457650..9458092 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0016408.2-cds | Sed0016408.2-cds-LG07:9456107..9456556 | CDS |
Sed0016408.2-cds | Sed0016408.2-cds-LG07:9457650..9457832 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Sed0016408.2-three_prime_utr | Sed0016408.2-three_prime_utr-LG07:9457833..9458092 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Sed0016408.2 | Sed0016408.2-protein | polypeptide |