Sed0016408 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACTAATGGTGAACTCTTGAAAAATGTAGATATTTTTTGAAAAATGAATAACTATTATTATTATAATTTGACAATTCAGCCCAAAATTCATATAAACCTTACAAGTAAAAAAAAAACCCATCAATCTTCGAACAGATAAGTGAATAAACACAAACACTCCCACCATTAATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGGTCTCTGCTTTCTTCTCTGTCTCTTGGTTTTTAGGGATTTGCCTTTTTGGATAGGCTTTTACGGTGGAAATATTAATGGGTTATTTCTTTATTTATTATTTATCCATTATTTTTTAGATTCATTTCATTTAAGTTTTTATACTTTCAATTTTATTTTTTCCCCATATTTAAATTTTTTTTTGTAATCCATGTAATTTCAATAACATCTAAAATTGTACTAAAAAAAATAAAAAAATCTAAAATTAATCTACATTTTTAATTTTTTAAAAATTATTTTTATTCGTTTTTTTTTTTAATTTTTAAAAGAAAACTAGTTGAAGATAGTAAATTCTTGTATCCTTATCCAATTATTAAAAACATTTCAATTTTGATGTTTTTCAATCAATTTAACTTAGTCGAAGACATCCATCTAACTTGATTGAAACTATTATTTGTTTGAATTTGATTGAAATTATGAAATGATATTTGATTTTTTTTGAAAAAAATTGAAATTCTATAGATTTTAATTTTAATTTTGTTATATATCTTTTTTTTAATTCAATAATTTACGGTGAAAAGATTATAATTCATGATCTCTAGTATATATAACATATTAATTAGTTAGTTAAATTTTGTTCACCATTAATTTTTTATTATTATTAAAAGTTGAGTGAAAATTTAAAAACTATAAAAAATAAAATAGGGGTTTAAATTATAAAGTAAGTAATGAAAAGTATCTTAATCTTATTTATTTTAAGAGTATGAAATATTTTAATGTTTAGCTGTGTAATTCAGATAAAAAGAACTTTATAGTTTTTAGGCTATTTTAAATTTATTTATAAAATAACAAGTAAATATAACAATAGTTTAATGAACCAATTATCAAAAAGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCTCGAATCCCAGCAGCCACATTATTTTTTCTTTTTCATAATGCATGTTAGAACGACCTAGTTGACATAGAGATATCCAAAGATAAAATACAGGTCAAGAGAGCTAAATTTATGTCTTTTAACTTATGAAATGAAATGTGTTAGTATTTGAATATTTGGCCACGTGTTTGGCAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAACCCTAAAATGGGATTTTCCCTTGAGTTCTACTTTTTTTGTTAAATTGTTGGAAACTCCCAATTAATATGTACAAATTTTGTTAATTTGTAACTAAGATGTACCATATGTTTTTAGGTGAGTAATTTAATATTTTGGTTGTGTCTAGAGATCGTTTATATAAATGAGGTTGAGTTATTATAACACAACCTATGTTTGGATCATTGGTTTGAAAAATCAAAATCCATCATTTCATTTAAAAATAATATCTTTTTTTGTTTCA CTTACTAATGGTGAACTCTTGAAAAATGTAGATATTTTTTGAAAAATGAATAACTATTATTATTATAATTTGACAATTCAGCCCAAAATTCATATAAACCTTACAAGTAAAAAAAAAACCCATCAATCTTCGAACAGATAAGTGAATAAACACAAACACTCCCACCATTAATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTGGTTCAAAATTAGGAGACATTGGAGACATGGTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGCCCTTCTACTCAAATGGTGTACTAGGTTCAAATCTCCATCACAAAAATCAAGGTAACCCTAAAATGGGATTTTCCCTTGAGTTCTACTTTTTTTGTTAAATTGTTGGAAACTCCCAATTAATATGTACAAATTTTGTTAATTTGTAACTAAGATGTACCATATGTTTTTAGGTGAGTAATTTAATATTTTGGTTGTGTCTAGAGATCGTTTATATAAATGAGGTTGAGTTATTATAACACAACCTATGTTTGGATCATTGGTTTGAAAAATCAAAATCCATCATTTCATTTAAAAATAATATCTTTTTTTGTTTCA ATGAACTTCACAATCCCAATTCTCCAATTTCCCCAAATCCCCAAAGCCCTAAACACCAAAATCCACGCCTCCAACTCCCAATCACCTCTCCCACCAAAACCCCCAATCGCTCGAAACATCCCGACGATGGCGGAGATCGTGGCGGCCGGCGAGGCGCAGAATCTGAACCTCCGGCTGCAAACACTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTCGGAATCGGGCCGGGAGATCGGGAAGGCGGAGGGACTGATAAGAGCGTGGAGGCGAGGAAAGGTTCTTCATCTGGATTCGATTCGATTGAACCGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGAATCGGATTGTTCATCGGCGCCGTTGCGATTCGGTACGGGTTCGATTGCGGCTGCGACACGGCGGAGTTGTTGGCCATTAATGATTCCGATCTCTACCATTCTAAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGA MNFTIPILQFPQIPKALNTKIHASNSQSPLPPKPPIARNIPTMAEIVAAGEAQNLNLRLQTLGPFFRITAKSSESGREIGKAEGLIRAWRRGKVLHLDSIRLNRESLGMEKSIFGIGLFIGAVAIRYGFDCGCDTAELLAINDSDLYHSKILHKDWVQDNV Homology
BLAST of Sed0016408 vs. NCBI nr
Match: XP_038903453.1 (uncharacterized protein LOC120090038 [Benincasa hispida]) HSP 1 Score: 228.8 bits (582), Expect = 3.3e-56 Identity = 122/163 (74.85%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of Sed0016408 vs. NCBI nr
Match: XP_008454398.1 (PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 7.7e-53 Identity = 120/168 (71.43%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of Sed0016408 vs. NCBI nr
Match: XP_022984679.1 (uncharacterized protein LOC111482888 [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52 Identity = 120/173 (69.36%), Postives = 133/173 (76.88%), Query Frame = 0
BLAST of Sed0016408 vs. NCBI nr
Match: XP_022149148.1 (uncharacterized protein LOC111017637 [Momordica charantia]) HSP 1 Score: 216.5 bits (550), Expect = 1.7e-52 Identity = 122/169 (72.19%), Postives = 134/169 (79.29%), Query Frame = 0
BLAST of Sed0016408 vs. NCBI nr
Match: XP_022922749.1 (uncharacterized protein LOC111430648 [Cucurbita moschata]) HSP 1 Score: 214.9 bits (546), Expect = 5.0e-52 Identity = 119/173 (68.79%), Postives = 132/173 (76.30%), Query Frame = 0
BLAST of Sed0016408 vs. ExPASy TrEMBL
Match: A0A1S3BZR1 (uncharacterized protein LOC103494815 OS=Cucumis melo OX=3656 GN=LOC103494815 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.7e-53 Identity = 120/168 (71.43%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of Sed0016408 vs. ExPASy TrEMBL
Match: A0A6J1JB84 (uncharacterized protein LOC111482888 OS=Cucurbita maxima OX=3661 GN=LOC111482888 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.3e-53 Identity = 120/173 (69.36%), Postives = 133/173 (76.88%), Query Frame = 0
BLAST of Sed0016408 vs. ExPASy TrEMBL
Match: A0A6J1D616 (uncharacterized protein LOC111017637 OS=Momordica charantia OX=3673 GN=LOC111017637 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.3e-53 Identity = 122/169 (72.19%), Postives = 134/169 (79.29%), Query Frame = 0
BLAST of Sed0016408 vs. ExPASy TrEMBL
Match: A0A6J1E4B2 (uncharacterized protein LOC111430648 OS=Cucurbita moschata OX=3662 GN=LOC111430648 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.4e-52 Identity = 119/173 (68.79%), Postives = 132/173 (76.30%), Query Frame = 0
BLAST of Sed0016408 vs. ExPASy TrEMBL
Match: A0A0A0KT41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000740 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 3.2e-52 Identity = 117/161 (72.67%), Postives = 128/161 (79.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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