Sed0013010.3 (mRNA) Chayote v1

Overview


Name	Sed0013010.3
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	GEM-like protein 4 isoform X1
Location	LG03: 5889678 .. 5892056 (-)
Sequence length	1100
RNA-Seq Expression	Sed0013010.3
Synteny	Sed0013010.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTAATAATCTCGATGGACGGCCATGGCTGACTCAGCTGATAAAGCTTCAAAATTTCACCAATTTCATTCCTCCATTTATATGTGGAGATTTTGATCAACATTGATCATCCACACACCAACATTTCCTCTGTTTTTTACATTAAGACACTTTCAAGTAGAAGCAGAGAGGAAAAAATGGAAGCTTTGATGAAACAGGAAATTGTCGGGATCCCGGTTGGCTTGGCGGCGTTTCGGCCGGTCGAGAAGTCGCTGAAGAGGCTGTTGCCTGCTCCGGTCGGCAGCCAGTCTCCGAATAACGACGAGCCTCGAACGAAACAATGTAACAGTTCTTGATGTCTATGTGTGTGTTTGTAGTGAGGGGAAATGGTAGCTGAATGGAGAGGATTTTGTGAATGTTTTTGCAGGTAGAGAGGATGCAGTTGTTAGCATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGGTAAGCTTTTTTGTTTTGTTTTGTTTTTTTTGCTTGATTAGACTAAATTATTACATCCTACTGAGATGCAAACATAATCTCGTATCGATTAGAAGTGGTGAAGATCTTGGGTATATAATTAGGAACAACGTACTAAGTTTAAAAATTGGCCCAAGTGTAAAATGGACGGTCTAATATCATTATTGGAATGATGGATCATTGATCATTCACAAGTGAGCTTAATCATAAAATCTCTTAGATTCGAGTTTCAGGGCAGGGCAGGTGCAGATTCTTGAGATATGTAGTAGAATCAAGTATTAAATCAAATAGTTGTCTAGATGTGCGTGATCCCGATTTTCAGTTGCCACAAAAGGATAGTTAGGTAACAATTATACATAGAAAAGAATATCGAATTTCAACAATATTTAGGATGGAGGATTCAAACCTCTGACTTAATAGTTGAGGTCATATGGAGGTTATAAATGGTACATCGGTAGAGTTAATTGATAAGTCATTTCAACGTCTCATTAACGGTCTGAAACATGGTTACTTTTAAATCAAGTTATTTAAATCACCAAAACATAGAGACCATGAACTTATGTTTCTATTGTTTGTTTGGTAAAGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTCATCTCTCTCTCTCTATTCGATTACCCGAACTTTCAAATTTGTGTCGAACATGTTCCTAAACTGGAACAAGTATCGAATAAGTACCTTAACTTTCAAAAGTGTCTAACAAGTTAAGTTGTATCAAACTGTCACTAATTTATTCAACATTTTTAAAAATTCAAATGTTATTCGACATAAAACTGAAAGTTTAAAGTTTAATGTTTTATACACGACGTTGAAAGCTTATAAACTTATTCTAGCTTACCAACAAGAGCATAGCTTAACTAGCACGTACAAATGTCCACAGGGCGGGGTAGGGGAATGACTTCCTTGTTCCTGTCCCCATCATCAAAATCAATCTCCATCTCCGCAAAATTCACTATTTTTTTGTGGAAATCGGGGAATTTTCTTTTCCCGTCCTCGACCCTGTTCCCCGCCTAAACGGGGATTTCCCATCGGGGCGGGTCCCCGCAAGAAAAATGAACATCTCTACTAGCATGATGTATGACTAGATTCGAATCTTTCCATCTTTAAATGTTGTTTGAATTAAAAATATATAGTTTAGAAATCCATCTGACTGAAAAAATGAAAGTTAAAGGGTCTATTAGACACAAAAACGAAAGTTCAAGGACTAAACTTGTAATTTTGTCGCTCGTCCCATGATGTTTACTGAACTCTCTGTGATGTAATGCAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGAAACATTAATTACTAGTGTTTTCTTTCTTTTGTTTTCCTTGTGCTTCATTATATTTATTTGAATTTAATTATCGAAGCTAGGGAAATCTAGATAGAGAGATAGTTACATTAGACCCTATTTGTACAAATTTAATTAGTATCAATATAAGTTGATATATTATATATCTAAA

mRNA sequence

CTTTTAATAATCTCGATGGACGGCCATGGCTGACTCAGCTGATAAAGCTTCAAAATTTCACCAATTTCATTCCTCCATTTATATGTGGAGATTTTGATCAACATTGATCATCCACACACCAACATTTCCTCTGTTTTTTACATTAAGACACTTTCAAGTAGAAGCAGAGAGGAAAAAATGGAAGCTTTGATGAAACAGGAAATTGTCGGGATCCCGGTTGGCTTGGCGGCGTTTCGGCCGGTCGAGAAGTCGCTGAAGAGGCTGTTGCCTGCTCCGGTCGGCAGCCAGTCTCCGAATAACGACGAGCCTCGAACGAAACAATGTAACAGTTCTTGATGTCTATGTGTGTGTTTGTAGTGAGGGGAAATGGTAGCTGAATGGAGAGGATTTTGTGAATGTTTTTGCAGGTAGAGAGGATGCAGTTGTTAGCATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGAAACATTAATTACTAGTGTTTTCTTTCTTTTGTTTTCCTTGTGCTTCATTATATTTATTTGAATTTAATTATCGAAGCTAGGGAAATCTAGATAGAGAGATAGTTACATTAGACCCTATTTGTACAAATTTAATTAGTATCAATATAAGTTGATATATTATATATCTAAA

Coding sequence (CDS)

ATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGA

Protein sequence

MGSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE

Homology

[Close]

BLAST of Sed0013010.3 vs. NCBI nr
Match: XP_022938453.1 (GEM-like protein 4 isoform X1 [Cucurbita moschata] >XP_023551579.1 GEM-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 8.4e-79
Identity = 150/165 (90.91%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 222

[Close]

BLAST of Sed0013010.3 vs. NCBI nr
Match: XP_022993511.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 149/165 (90.30%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPL+GLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLSGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 222

[Close]

BLAST of Sed0013010.3 vs. NCBI nr
Match: XP_022938454.1 (putative GEM-like protein 8 isoform X2 [Cucurbita moschata] >XP_023551580.1 putative GEM-like protein 8 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREH  VRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREH--VRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 220

[Close]

BLAST of Sed0013010.3 vs. NCBI nr
Match: XP_038875315.1 (putative GEM-like protein 8 [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 146/164 (89.02%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 3   SKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLK 62
           S VGSFA GVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLLK
Sbjct: 59  SMVGSFAQGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLLK 118

Query: 63  ACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTE 122
           ACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIE V +
Sbjct: 119 ACQCYLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPVGRIESVNQ 178

Query: 123 SKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQK+FRFLQ+AISQE
Sbjct: 179 SKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKSFRFLQQAISQE 222

[Close]

BLAST of Sed0013010.3 vs. NCBI nr
Match: XP_022993512.1 (putative GEM-like protein 8 isoform X2 [Cucurbita maxima])

HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREH  VRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREH--VRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPL+GLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLSGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 220

[Close]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.2e-49
Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K   F +GVR+   +R   K+ ETVK KLS GA++LQ+GGL K++K+LF V EGEKL K 
Sbjct: 55  KTDGFTNGVRDQSKIR--PKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKM 114

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP G+++  HYKV IP+ +I+RV +S
Sbjct: 115 YQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQS 174

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAIS 165
           +N  KPSQKYLE+VTVD FDFWFMGF ++QK F  L++A+S
Sbjct: 175 QNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

[Close]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-48
Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +GVR+    +LG K+ ETVK KLS GA++LQ+GGL K+YK+LF V + EKL KA
Sbjct: 56  KNDSFTNGVRDQ--DKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKA 115

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP GEL   HYKV IP+ +I  V +S
Sbjct: 116 YQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQS 175

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAIS 165
           +N  KPSQKYLE+VTVD FDFWFMGF ++QK F  L++A+S
Sbjct: 176 QNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +G R+    +LG K+ ETVK KLS GAK+LQ+GGL K+YK+LF V + EKL KA
Sbjct: 56  KTDSFTNGARDQ--DKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKA 115

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP G L   HYKV IP+ +I  V +S
Sbjct: 116 YQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQS 175

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +N  KPSQKYLEIVT+DNFDFWFMGF ++QK F  L++A++ +
Sbjct: 176 QNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 216

[Close]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-47
Identity = 92/163 (56.44%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +G R+    +LG K+ ETVK KLS GAK+LQ+GGL K+YK+LF V + EKL KA
Sbjct: 48  KTDSFTNGARDQ--DKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKA 107

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT G +AGLLFIS+ K+AFC+ +S+K+ SP G+L   HYKV IP+ +I  V +S
Sbjct: 108 YQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQS 167

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +N  KPSQ+YLE+VTVDN+DFWFMGF ++QK F  L++A++++
Sbjct: 168 QNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

[Close]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-26
Identity = 58/161 (36.02%), Postives = 101/161 (62.73%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  +   G+++H  ++    I +    +LS G KM+  GG  +V+++ F V   EKLL +
Sbjct: 66  KAEALVGGLKDH--LKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDS 125

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPT-GELLTFHYKVVIPIGRIERVTE 123
             C +STT+GP+ G+++IS  ++AFC+  +++LPS   G  +  +YKVV+   +I  ++ 
Sbjct: 126 FVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISS 185

Query: 124 SKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAI 164
           S N++KPS++Y+ +VT D F+FWFMGF ++   F  L +A+
Sbjct: 186 STNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 224

[Close]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL
Match: A0A6J1FIY0 (GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 150/165 (90.91%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 222

[Close]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL
Match: A0A6J1JWI9 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.1e-79
Identity = 149/165 (90.30%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPL+GLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLSGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 222

[Close]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL
Match: A0A6J1FE51 (putative GEM-like protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREH  VRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREH--VRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 220

[Close]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL
Match: A0A5D3CXS2 (GEM-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00560 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.5e-76
Identity = 146/164 (89.02%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 3   SKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLK 62
           S VGSFA GVREHVAVRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLLK
Sbjct: 59  SMVGSFAQGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLLK 118

Query: 63  ACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTE 122
           ACQC LSTTTGPLAGLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV +
Sbjct: 119 ACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPVGRIERVNQ 178

Query: 123 SKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQK+FR LQ+AISQE
Sbjct: 179 SKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKSFRSLQQAISQE 222

[Close]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL
Match: A0A6J1JT11 (putative GEM-like protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.5e-76
Identity = 147/165 (89.09%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           GSKVGSFAHGVREH  VRLGQKIRETVKGKL+ GAK+LQ+GGLRKVYKQLFSVREGEKLL
Sbjct: 58  GSKVGSFAHGVREH--VRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLL 117

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVT 121
           KACQC LSTTTGPL+GLLFISTHKLAFC+ KSLKL SPTGELL FHYKVVIP+GRIERV 
Sbjct: 118 KACQCHLSTTTGPLSGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVN 177

Query: 122 ESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +SKN+MKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQ+AIS E
Sbjct: 178 QSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHE 220

[Close]

BLAST of Sed0013010.3 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-50
Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K   F +GVR+   +R   K+ ETVK KLS GA++LQ+GGL K++K+LF V EGEKL K 
Sbjct: 55  KTDGFTNGVRDQSKIR--PKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKM 114

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP G+++  HYKV IP+ +I+RV +S
Sbjct: 115 YQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQS 174

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAIS 165
           +N  KPSQKYLE+VTVD FDFWFMGF ++QK F  L++A+S
Sbjct: 175 QNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

[Close]

BLAST of Sed0013010.3 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49
Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +GVR+    +LG K+ ETVK KLS GA++LQ+GGL K+YK+LF V + EKL KA
Sbjct: 56  KNDSFTNGVRDQ--DKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKA 115

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP GEL   HYKV IP+ +I  V +S
Sbjct: 116 YQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQS 175

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAIS 165
           +N  KPSQKYLE+VTVD FDFWFMGF ++QK F  L++A+S
Sbjct: 176 QNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of Sed0013010.3 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +G R+    +LG K+ ETVK KLS GAK+LQ+GGL K+YK+LF V + EKL KA
Sbjct: 118 KTDSFTNGARDQ--DKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKA 177

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT GP+AGLLFIS+ K+AFC+ +S+K+ SP G L   HYKV IP+ +I  V +S
Sbjct: 178 YQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQS 237

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +N  KPSQKYLEIVT+DNFDFWFMGF ++QK F  L++A++ +
Sbjct: 238 QNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 278

[Close]

BLAST of Sed0013010.3 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-48
Identity = 92/163 (56.44%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 4   KVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKA 63
           K  SF +G R+    +LG K+ ETVK KLS GAK+LQ+GGL K+YK+LF V + EKL KA
Sbjct: 48  KTDSFTNGARDQ--DKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKA 107

Query: 64  CQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTES 123
            QC LSTT G +AGLLFIS+ K+AFC+ +S+K+ SP G+L   HYKV IP+ +I  V +S
Sbjct: 108 YQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQS 167

Query: 124 KNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE 167
           +N  KPSQ+YLE+VTVDN+DFWFMGF ++QK F  L++A++++
Sbjct: 168 QNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

[Close]

BLAST of Sed0013010.3 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 2   GSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLL 61
           G KV          V V+    I +    +LS G KM+  GG  +V+++ F V   EKLL
Sbjct: 57  GKKVEDATRKAEALVGVKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLL 116

Query: 62  KACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPT-GELLTFHYKVVIPIGRIERV 121
            +  C +STT+GP+ G+++IS  ++AFC+  +++LPS   G  +  +YKVV+   +I  +
Sbjct: 117 DSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSI 176

Query: 122 TESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAI 164
           + S N++KPS++Y+ +VT D F+FWFMGF ++   F  L +A+
Sbjct: 177 SSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 219

The following BLAST results are available for this feature:

BLAST of Sed0013010.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938453.1	8.4e-79	90.91	GEM-like protein 4 isoform X1 [Cucurbita moschata] >XP_023551579.1 GEM-like prot...	[more]
XP_022993511.1	1.9e-78	90.30	GEM-like protein 4 isoform X1 [Cucurbita maxima]	[more]
XP_022938454.1	2.3e-76	89.70	putative GEM-like protein 8 isoform X2 [Cucurbita moschata] >XP_023551580.1 puta...	[more]
XP_038875315.1	3.9e-76	89.02	putative GEM-like protein 8 [Benincasa hispida]	[more]
XP_022993512.1	5.1e-76	89.09	putative GEM-like protein 8 isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0013010.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FTA0	4.2e-49	57.76	GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1	[more]
Q9FMW4	2.1e-48	59.63	Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV...	[more]
Q9FMW6	3.6e-48	58.28	GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2	[more]
Q9FMW5	3.0e-47	56.44	GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1	[more]
Q9M122	5.0e-26	36.02	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]

BLAST of Sed0013010.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIY0	4.1e-79	90.91	GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3...	[more]
A0A6J1JWI9	9.1e-79	90.30	GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 S...	[more]
A0A6J1FE51	1.1e-76	89.70	putative GEM-like protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5D3CXS2	2.5e-76	89.02	GEM-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1JT11	2.5e-76	89.09	putative GEM-like protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114894...	[more]

BLAST of Sed0013010.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08350.1	3.0e-50	57.76	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23370.1	1.5e-49	59.63	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	2.6e-49	58.28	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23360.1	2.2e-48	56.44	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT4G01600.2	1.6e-27	36.81	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 46..124 e-value: 6.9E-15 score: 65.5
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 48..165 e-value: 2.0E-16 score: 59.9
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 44..165 e-value: 1.1E-20 score: 75.5
None	No IPR available	PANTHER	PTHR31969:SF38	GEM-LIKE PROTEIN 4	coord: 2..165
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 2..165

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0013010	Sed0013010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013010.3-exon	Sed0013010.3-exon-LG03:5889678..5890020	exon
Sed0013010.3-exon	Sed0013010.3-exon-LG03:5890697..5890977	exon
Sed0013010.3-exon	Sed0013010.3-exon-LG03:5891581..5892056	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013010.3-three_prime_utr	Sed0013010.3-three_prime_utr-LG03:5889678..5889846	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013010.3-cds	Sed0013010.3-cds-LG03:5889847..5890020	CDS
Sed0013010.3-cds	Sed0013010.3-cds-LG03:5890697..5890977	CDS
Sed0013010.3-cds	Sed0013010.3-cds-LG03:5891581..5891626	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013010.3-five_prime_utr	Sed0013010.3-five_prime_utr-LG03:5891627..5892056	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0013010.3	Sed0013010.3-protein	polypeptide