Sed0013010 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTAATAATCTCGATGGACGGCCATGGCTGACTCAGCTGATAAAGCTTCAAAATTTCACCAATTTCATTCCTCCATTTATATGTGGAGATTTTGATCAACATTGATCATCCACACACCAACATTTCCTCTGTTTTTTACATTAAGACACTTTCAAGTAGAAGCAGAGAGGAAAAAATGGAAGCTTTGATGAAACAGGAAATTGTCGGGATCCCGGTTGGCTTGGCGGCGTTTCGGCCGGTCGAGAAGTCGCTGAAGAGGCTGTTGCCTGCTCCGGTCGGCAGCCAGTCTCCGAATAACGACGAGCCTCGAACGAAACAATGTAACAGTTCTTGATGTCTATGTGTGTGTTTGTAGTGAGGGGAAATGGTAGCTGAATGGAGAGGATTTTGTGAATGTTTTTGCAGGTAGAGAGGATGCAGTTGTTAGCATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGGTAAGCTTTTTTGTTTTGTTTTGTTTTTTTTGCTTGATTAGACTAAATTATTACATCCTACTGAGATGCAAACATAATCTCGTATCGATTAGAAGTGGTGAAGATCTTGGGTATATAATTAGGAACAACGTACTAAGTTTAAAAATTGGCCCAAGTGTAAAATGGACGGTCTAATATCATTATTGGAATGATGGATCATTGATCATTCACAAGTGAGCTTAATCATAAAATCTCTTAGATTCGAGTTTCAGGGCAGGGCAGGTGCAGATTCTTGAGATATGTAGTAGAATCAAGTATTAAATCAAATAGTTGTCTAGATGTGCGTGATCCCGATTTTCAGTTGCCACAAAAGGATAGTTAGGTAACAATTATACATAGAAAAGAATATCGAATTTCAACAATATTTAGGATGGAGGATTCAAACCTCTGACTTAATAGTTGAGGTCATATGGAGGTTATAAATGGTACATCGGTAGAGTTAATTGATAAGTCATTTCAACGTCTCATTAACGGTCTGAAACATGGTTACTTTTAAATCAAGTTATTTAAATCACCAAAACATAGAGACCATGAACTTATGTTTCTATTGTTTGTTTGGTAAAGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTCATCTCTCTCTCTCTATTCGATTACCCGAACTTTCAAATTTGTGTCGAACATGTTCCTAAACTGGAACAAGTATCGAATAAGTACCTTAACTTTCAAAAGTGTCTAACAAGTTAAGTTGTATCAAACTGTCACTAATTTATTCAACATTTTTAAAAATTCAAATGTTATTCGACATAAAACTGAAAGTTTAAAGTTTAATGTTTTATACACGACGTTGAAAGCTTATAAACTTATTCTAGCTTACCAACAAGAGCATAGCTTAACTAGCACGTACAAATGTCCACAGGGCGGGGTAGGGGAATGACTTCCTTGTTCCTGTCCCCATCATCAAAATCAATCTCCATCTCCGCAAAATTCACTATTTTTTTGTGGAAATCGGGGAATTTTCTTTTCCCGTCCTCGACCCTGTTCCCCGCCTAAACGGGGATTTCCCATCGGGGCGGGTCCCCGCAAGAAAAATGAACATCTCTACTAGCATGATGTATGACTAGATTCGAATCTTTCCATCTTTAAATGTTGTTTGAATTAAAAATATATAGTTTAGAAATCCATCTGACTGAAAAAATGAAAGTTAAAGGGTCTATTAGACACAAAAACGAAAGTTCAAGGACTAAACTTGTAATTTTGTCGCTCGTCCCATGATGTTTACTGAACTCTCTGTGATGTAATGCAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGAAACATTAATTACTAGTGTTTTCTTTCTTTTGTTTTCCTTGTGCTTCATTATATTTATTTGAATTTAATTATCGAAGCTAGGGAAATCTAGATAGAGAGATAGTTACATTAGACCCTATTTGTACAAATTTAATTAGTATCAATATAAGTTGATATATTATATATCTAAA CTTTTAATAATCTCGATGGACGGCCATGGCTGACTCAGCTGATAAAGCTTCAAAATTTCACCAATTTCATTCCTCCATTTATATGTGGAGATTTTGATCAACATTGATCATCCACACACCAACATTTCCTCTGTTTTTTACATTAAGACACTTTCAAGTAGAAGCAGAGAGGAAAAAATGGAAGCTTTGATGAAACAGGAAATTGTCGGGATCCCGGTTGGCTTGGCGGCGTTTCGGCCGGTCGAGAAGTCGCTGAAGAGGCTGTTGCCTGCTCCGGTCGGCAGCCAGTCTCCGAATAACGACGAGCCTCGAACGAAACAATGTAGAGAGGATGCAGTTGTTAGCATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGAAACATTAATTACTAGTGTTTTCTTTCTTTTGTTTTCCTTGTGCTTCATTATATTTATTTGAATTTAATTATCGAAGCTAGGGAAATCTAGATAGAGAGATAGTTACATTAGACCCTATTTGTACAAATTTAATTAGTATCAATATAAGTTGATATATTATATATCTAAA ATGGAAGCTTTGATGAAACAGGAAATTGTCGGGATCCCGGTTGGCTTGGCGGCGTTTCGGCCGGTCGAGAAGTCGCTGAAGAGGCTGTTGCCTGCTCCGGTCGGCAGCCAGTCTCCGAATAACGACGAGCCTCGAACGAAACAATGTAGAGAGGATGCAGTTGTTAGCATGGGGAGTAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAAGGAAAGTTGAGTTATGGAGCAAAGATGCTTCAAATTGGTGGGTTGAGGAAAGTTTACAAGCAGCTATTTAGTGTAAGAGAAGGAGAGAAGTTACTAAAGGCTTGTCAATGCCAATTGTCAACAACAACAGGGCCTCTTGCAGGGCTTCTCTTCATTTCCACACACAAACTTGCCTTTTGCACTCACAAATCCCTCAAACTCCCTTCCCCAACTGGAGAGCTCCTAACATTTCATTACAAGGTGGTGATTCCAATTGGAAGAATAGAGAGAGTGACAGAGAGTAAGAATATGATGAAGCCTTCACAGAAGTACTTAGAGATTGTAACTGTGGATAATTTTGATTTCTGGTTCATGGGGTTTCAAAATTTCCAAAAAACATTCAGATTTCTTCAAGAAGCTATCTCTCAAGAGTGA MEALMKQEIVGIPVGLAAFRPVEKSLKRLLPAPVGSQSPNNDEPRTKQCREDAVVSMGSKVGSFAHGVREHVAVRLGQKIRETVKGKLSYGAKMLQIGGLRKVYKQLFSVREGEKLLKACQCQLSTTTGPLAGLLFISTHKLAFCTHKSLKLPSPTGELLTFHYKVVIPIGRIERVTESKNMMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQEAISQE Homology
BLAST of Sed0013010 vs. NCBI nr
Match: XP_022938453.1 (GEM-like protein 4 isoform X1 [Cucurbita moschata] >XP_023551579.1 GEM-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.6 bits (976), Expect = 9.5e-102 Identity = 190/222 (85.59%), Postives = 205/222 (92.34%), Query Frame = 0
BLAST of Sed0013010 vs. NCBI nr
Match: XP_022993511.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 189/222 (85.14%), Postives = 205/222 (92.34%), Query Frame = 0
BLAST of Sed0013010 vs. NCBI nr
Match: XP_022938454.1 (putative GEM-like protein 8 isoform X2 [Cucurbita moschata] >XP_023551580.1 putative GEM-like protein 8 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.5 bits (955), Expect = 2.6e-99 Identity = 188/222 (84.68%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of Sed0013010 vs. NCBI nr
Match: XP_038875315.1 (putative GEM-like protein 8 [Benincasa hispida]) HSP 1 Score: 372.1 bits (954), Expect = 3.4e-99 Identity = 187/222 (84.23%), Postives = 201/222 (90.54%), Query Frame = 0
BLAST of Sed0013010 vs. NCBI nr
Match: XP_022993512.1 (putative GEM-like protein 8 isoform X2 [Cucurbita maxima]) HSP 1 Score: 370.9 bits (951), Expect = 7.5e-99 Identity = 187/222 (84.23%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.7e-49 Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.8e-48 Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 192.6 bits (488), Expect = 4.8e-48 Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.1e-47 Identity = 101/193 (52.33%), Postives = 135/193 (69.95%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.8e-26 Identity = 62/170 (36.47%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy TrEMBL
Match: A0A6J1FIY0 (GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 4.6e-102 Identity = 190/222 (85.59%), Postives = 205/222 (92.34%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy TrEMBL
Match: A0A6J1JWI9 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101 Identity = 189/222 (85.14%), Postives = 205/222 (92.34%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy TrEMBL
Match: A0A6J1FE51 (putative GEM-like protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99 Identity = 188/222 (84.68%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy TrEMBL
Match: A0A6J1JT11 (putative GEM-like protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.6e-99 Identity = 187/222 (84.23%), Postives = 203/222 (91.44%), Query Frame = 0
BLAST of Sed0013010 vs. ExPASy TrEMBL
Match: A0A1S3CNI6 (GEM-like protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502800 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 2.2e-96 Identity = 183/222 (82.43%), Postives = 196/222 (88.29%), Query Frame = 0
BLAST of Sed0013010 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 195.7 bits (496), Expect = 4.0e-50 Identity = 93/161 (57.76%), Postives = 124/161 (77.02%), Query Frame = 0
BLAST of Sed0013010 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-49 Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of Sed0013010 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 192.6 bits (488), Expect = 3.4e-49 Identity = 95/163 (58.28%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of Sed0013010 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 189.5 bits (480), Expect = 2.9e-48 Identity = 101/193 (52.33%), Postives = 135/193 (69.95%), Query Frame = 0
BLAST of Sed0013010 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27 Identity = 62/178 (34.83%), Postives = 104/178 (58.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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