Sed0009603.1 (mRNA) Chayote v1

Overview


Name	Sed0009603.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Vitellogenin-2
Location	LG12: 31597897 .. 31598664 (+)
Sequence length	768
RNA-Seq Expression	Sed0009603.1
Synteny	Sed0009603.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCGACGAAATGCCCCACTGAAATTTCACTGTCAAATGACCTTGTTTTCTCGGACTTGTTGCCGGTGGATTCGAATTCTGACTTTGAGTTTTGTGTCAGCGGCGGCTTTGACTGCGAGTCTTCTTCTGCGGATGAGCTTTTCTTCAATGGGGTCATAGTTCCATCTCAGAATCAACAGAGCTTTGTGAAAAGTAAACAAACCCATCAACGTGAGAGTGCTGTGTTGTCACCCTCTTCACTTCCTCCTCTTCCTCCTTCTGTGGCAACTGAGAATTCAAAGAAAACAGAGGAATTTGTTCATGTGGTGAATAATTCTGAGTCTGAGAAGAAAACTCGGTCGAAATCTTTCTGGGGGTTTCGAAGAAGTAACAGTGTTAGTTTTGAAAGTGGAAAGGGTTCATTTTTCTCGTTGCCGCTTCTGTCACGAAGCAATTCAACTGGTTCGGTGGAAACCCAAAAGGGGAAGCCATTGATGATGGATGTGAAAAGTCAGAGCTCTCAGCTGCAGAGACAGGTTTCAGTTGCAGAGGGGAAGTCAAAGTCTTCATTTTCAAACTCTGCTGCTAATTCATATTCTAAACTCCAAAAGTCTCAGAAGAAGAATCATGGAGGGTTTTACGGCAAGAATCTGCAGGTAAATCACATTTTGAATGTTCCACCTCCTTATATTACCAAAGAAACTGCAAATATCTTTGGTTTGAGTTCTCTTTTACGTGGTAGCAAAGAAAAGAAGATCAAGAAGTGATTTTTTTTTTTTTTTCTT

mRNA sequence

ATGTGTTCGACGAAATGCCCCACTGAAATTTCACTGTCAAATGACCTTGTTTTCTCGGACTTGTTGCCGGTGGATTCGAATTCTGACTTTGAGTTTTGTGTCAGCGGCGGCTTTGACTGCGAGTCTTCTTCTGCGGATGAGCTTTTCTTCAATGGGGTCATAGTTCCATCTCAGAATCAACAGAGCTTTGTGAAAAGTAAACAAACCCATCAACGTGAGAGTGCTGTGTTGTCACCCTCTTCACTTCCTCCTCTTCCTCCTTCTGTGGCAACTGAGAATTCAAAGAAAACAGAGGAATTTGTTCATGTGGTGAATAATTCTGAGTCTGAGAAGAAAACTCGGTCGAAATCTTTCTGGGGGTTTCGAAGAAGTAACAGTGTTAGTTTTGAAAGTGGAAAGGGTTCATTTTTCTCGTTGCCGCTTCTGTCACGAAGCAATTCAACTGGTTCGGTGGAAACCCAAAAGGGGAAGCCATTGATGATGGATGTGAAAAGTCAGAGCTCTCAGCTGCAGAGACAGGTTTCAGTTGCAGAGGGGAAGTCAAAGTCTTCATTTTCAAACTCTGCTGCTAATTCATATTCTAAACTCCAAAAGTCTCAGAAGAAGAATCATGGAGGGTTTTACGGCAAGAATCTGCAGGTAAATCACATTTTGAATGTTCCACCTCCTTATATTACCAAAGAAACTGCAAATATCTTTGGTTTGAGTTCTCTTTTACGTGGTAGCAAAGAAAAGAAGATCAAGAAGTGATTTTTTTTTTTTTTTCTT

Coding sequence (CDS)

ATGTGTTCGACGAAATGCCCCACTGAAATTTCACTGTCAAATGACCTTGTTTTCTCGGACTTGTTGCCGGTGGATTCGAATTCTGACTTTGAGTTTTGTGTCAGCGGCGGCTTTGACTGCGAGTCTTCTTCTGCGGATGAGCTTTTCTTCAATGGGGTCATAGTTCCATCTCAGAATCAACAGAGCTTTGTGAAAAGTAAACAAACCCATCAACGTGAGAGTGCTGTGTTGTCACCCTCTTCACTTCCTCCTCTTCCTCCTTCTGTGGCAACTGAGAATTCAAAGAAAACAGAGGAATTTGTTCATGTGGTGAATAATTCTGAGTCTGAGAAGAAAACTCGGTCGAAATCTTTCTGGGGGTTTCGAAGAAGTAACAGTGTTAGTTTTGAAAGTGGAAAGGGTTCATTTTTCTCGTTGCCGCTTCTGTCACGAAGCAATTCAACTGGTTCGGTGGAAACCCAAAAGGGGAAGCCATTGATGATGGATGTGAAAAGTCAGAGCTCTCAGCTGCAGAGACAGGTTTCAGTTGCAGAGGGGAAGTCAAAGTCTTCATTTTCAAACTCTGCTGCTAATTCATATTCTAAACTCCAAAAGTCTCAGAAGAAGAATCATGGAGGGTTTTACGGCAAGAATCTGCAGGTAAATCACATTTTGAATGTTCCACCTCCTTATATTACCAAAGAAACTGCAAATATCTTTGGTTTGAGTTCTCTTTTACGTGGTAGCAAAGAAAAGAAGATCAAGAAGTGA

Protein sequence

MCSTKCPTEISLSNDLVFSDLLPVDSNSDFEFCVSGGFDCESSSADELFFNGVIVPSQNQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKSFWGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAEGKSKSSFSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIFGLSSLLRGSKEKKIKK

Homology

[Close]

BLAST of Sed0009603.1 vs. NCBI nr
Match: XP_016901379.1 (PREDICTED: uncharacterized protein LOC103494135 [Cucumis melo])

HSP 1 Score: 330.9 bits (847), Expect = 9.7e-87
Identity = 184/253 (72.73%), Postives = 210/253 (83.00%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKSF 120
           N Q FV +K+THQRES+ + PS+LPPLPP+V  ENSK TEE VHVV +SESEKK+RSKSF
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSKNTEELVHVV-SSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV+E
Sbjct: 121 WGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIF 240
             SKSS     FSNSA+NSYSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSLLRGSKEKK 247
           GLSS LRG KEKK
Sbjct: 241 GLSSFLRGGKEKK 251

[Close]

BLAST of Sed0009603.1 vs. NCBI nr
Match: KAA0058088.1 (vitellogenin-2 [Cucumis melo var. makuwa] >TYK28441.1 vitellogenin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 330.9 bits (847), Expect = 9.7e-87
Identity = 184/253 (72.73%), Postives = 210/253 (83.00%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKSF 120
           N Q FV +K+THQRES+ + PS+LPPLPP+V  ENSK TEE VHVV +SESEKK+RSKSF
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSKNTEELVHVV-SSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV+E
Sbjct: 121 WGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIF 240
             SKSS     FSNSA+NSYSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSLLRGSKEKK 247
           GLSS LRG KEKK
Sbjct: 241 GLSSFLRGGKEKK 251

[Close]

BLAST of Sed0009603.1 vs. NCBI nr
Match: XP_011660341.1 (uncharacterized protein LOC105436374 [Cucumis sativus] >KGN63833.1 hypothetical protein Csa_014046 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 186/255 (72.94%), Postives = 211/255 (82.75%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSK 120
           N Q FV +K+THQRES+ + PS+LPPLPP+VA ENSKK  TEE VHVV NSESEKK+RSK
Sbjct: 61  NHQGFVHNKRTHQRESSPILPSALPPLPPAVANENSKKENTEELVHVV-NSESEKKSRSK 120

Query: 121 SFWGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSV 180
           SFWGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV
Sbjct: 121 SFWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSV 180

Query: 181 AEGKSK-----SSFSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETAN 240
           +E  SK     SSFSNSA+N YSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETAN
Sbjct: 181 SESNSKSSFLTSSFSNSASNPYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETAN 240

Query: 241 IFGLSSLLRGSKEKK 247
           IFGLSS LRG KEKK
Sbjct: 241 IFGLSSFLRGRKEKK 253

[Close]

BLAST of Sed0009603.1 vs. NCBI nr
Match: XP_038898781.1 (uncharacterized protein LOC120086289 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.3e-83
Identity = 189/260 (72.69%), Postives = 210/260 (80.77%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSK 120
           N   FV SK++HQ +S +L PSSLPPLPP VATENSKK  TEE VH V NSE EKKTRSK
Sbjct: 61  NHHRFVHSKRSHQHDSPIL-PSSLPPLPPVVATENSKKENTEELVHGV-NSEFEKKTRSK 120

Query: 121 SFWGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSV 180
           SFWGFRRSNSV+++S K SF SLPLLSRSNSTGSV+  K  PL  DVKS +  LQ+Q SV
Sbjct: 121 SFWGFRRSNSVTYDSRKTSFCSLPLLSRSNSTGSVQNPKRTPL-KDVKSHNPVLQKQHSV 180

Query: 181 AEGKSKSS-----FSNSAANSYSKLQKSQKKNHGGFYGK--NLQVNHILNVPPPYITKET 240
           +EG SKSS     FSNSAANSYSKLQK+QKKN GGFYGK  NL VN ILNVPPPYITKET
Sbjct: 181 SEGNSKSSFFTSPFSNSAANSYSKLQKAQKKNQGGFYGKGNNLSVNPILNVPPPYITKET 240

Query: 241 ANIFGLSSLLRGSKEKKIKK 250
           ANIFGLSS LRG KEKK +K
Sbjct: 241 ANIFGLSSFLRGGKEKKSRK 257

[Close]

BLAST of Sed0009603.1 vs. NCBI nr
Match: XP_022134776.1 (uncharacterized protein LOC111006964 [Momordica charantia])

HSP 1 Score: 311.2 bits (796), Expect = 7.9e-81
Identity = 189/258 (73.26%), Postives = 203/258 (78.68%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVDSNSDFEFCVSGGFDCESSSADELFFNGVIVPSQNQ 60
           MCSTKCPT ISL       DL  +DS S+FEFCV G F+ ESSSADELFFNGVIVP+QNQ
Sbjct: 1   MCSTKCPTGISLPVHESPRDLSLLDSISEFEFCVGGSFEHESSSADELFFNGVIVPTQNQ 60

Query: 61  QSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSKSF 120
           Q FV SK+TH RESA   PSSLPPLPP+ ATENSKK  TEE VHVV NSESEKK+RSKSF
Sbjct: 61  QRFVHSKRTHPRESAPFLPSSLPPLPPAAATENSKKENTEELVHVV-NSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGF RSNSV+++S K S  SLPLLSRSNSTGSV+  K  PL  DVK QS  LQRQ SV+E
Sbjct: 121 WGFGRSNSVTYDSRKSSLCSLPLLSRSNSTGSVQNPKRTPL-KDVKGQSPLLQRQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQK-SQKKNHGGFYGKNLQVNHILNVPPPYITKETANI 240
           GKSKSS     FSNSAANSYSKLQK   KKN GGFYG NL +N ILNVPPPYITKETANI
Sbjct: 181 GKSKSSFLAPPFSNSAANSYSKLQKPHHKKNQGGFYGNNLCINPILNVPPPYITKETANI 240

Query: 241 FGLSSLLR-GSKEKKIKK 250
           FGLSSLLR G KEKK +K
Sbjct: 241 FGLSSLLRGGGKEKKNRK 256

[Close]

BLAST of Sed0009603.1 vs. ExPASy TrEMBL
Match: A0A5A7USG1 (Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00730 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.7e-87
Identity = 184/253 (72.73%), Postives = 210/253 (83.00%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKSF 120
           N Q FV +K+THQRES+ + PS+LPPLPP+V  ENSK TEE VHVV +SESEKK+RSKSF
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSKNTEELVHVV-SSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV+E
Sbjct: 121 WGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIF 240
             SKSS     FSNSA+NSYSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSLLRGSKEKK 247
           GLSS LRG KEKK
Sbjct: 241 GLSSFLRGGKEKK 251

[Close]

BLAST of Sed0009603.1 vs. ExPASy TrEMBL
Match: A0A1S4DZJ3 (uncharacterized protein LOC103494135 OS=Cucumis melo OX=3656 GN=LOC103494135 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.7e-87
Identity = 184/253 (72.73%), Postives = 210/253 (83.00%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKSF 120
           N Q FV +K+THQRES+ + PS+LPPLPP+V  ENSK TEE VHVV +SESEKK+RSKSF
Sbjct: 61  NHQRFVHNKRTHQRESSPILPSALPPLPPAVVNENSKNTEELVHVV-SSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV+E
Sbjct: 121 WGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIF 240
             SKSS     FSNSA+NSYSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETANIF
Sbjct: 181 SNSKSSFLTSPFSNSASNSYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETANIF 240

Query: 241 GLSSLLRGSKEKK 247
           GLSS LRG KEKK
Sbjct: 241 GLSSFLRGGKEKK 251

[Close]

BLAST of Sed0009603.1 vs. ExPASy TrEMBL
Match: A0A0A0LPT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024190 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 186/255 (72.94%), Postives = 211/255 (82.75%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVD--SNSDFEFCVSGGFDCESSSADELFFNGVIVPSQ 60
           MCSTKCP  ISLSNDLV S++LP+    +S+FEFCVSG F+ ESSSADELFFNGVI+P+Q
Sbjct: 1   MCSTKCPPGISLSNDLVLSEILPIQPRESSEFEFCVSGCFEYESSSADELFFNGVIIPTQ 60

Query: 61  NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSK 120
           N Q FV +K+THQRES+ + PS+LPPLPP+VA ENSKK  TEE VHVV NSESEKK+RSK
Sbjct: 61  NHQGFVHNKRTHQRESSPILPSALPPLPPAVANENSKKENTEELVHVV-NSESEKKSRSK 120

Query: 121 SFWGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSV 180
           SFWGFRRSNSV+++S K SF SLPLLSRSNSTGSV+T K  PL  DVK+Q+  LQ+Q SV
Sbjct: 121 SFWGFRRSNSVTYDSRKNSFCSLPLLSRSNSTGSVQTPKRTPL-KDVKTQNPMLQKQHSV 180

Query: 181 AEGKSK-----SSFSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETAN 240
           +E  SK     SSFSNSA+N YSKLQK+QKKN GGFYG NL VN ILNVPPPYITKETAN
Sbjct: 181 SESNSKSSFLTSSFSNSASNPYSKLQKAQKKNQGGFYGSNLYVNPILNVPPPYITKETAN 240

Query: 241 IFGLSSLLRGSKEKK 247
           IFGLSS LRG KEKK
Sbjct: 241 IFGLSSFLRGRKEKK 253

[Close]

BLAST of Sed0009603.1 vs. ExPASy TrEMBL
Match: A0A6J1BYR0 (uncharacterized protein LOC111006964 OS=Momordica charantia OX=3673 GN=LOC111006964 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.8e-81
Identity = 189/258 (73.26%), Postives = 203/258 (78.68%), Query Frame = 0


Query: 1   MCSTKCPTEISLSNDLVFSDLLPVDSNSDFEFCVSGGFDCESSSADELFFNGVIVPSQNQ 60
           MCSTKCPT ISL       DL  +DS S+FEFCV G F+ ESSSADELFFNGVIVP+QNQ
Sbjct: 1   MCSTKCPTGISLPVHESPRDLSLLDSISEFEFCVGGSFEHESSSADELFFNGVIVPTQNQ 60

Query: 61  QSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSKSF 120
           Q FV SK+TH RESA   PSSLPPLPP+ ATENSKK  TEE VHVV NSESEKK+RSKSF
Sbjct: 61  QRFVHSKRTHPRESAPFLPSSLPPLPPAAATENSKKENTEELVHVV-NSESEKKSRSKSF 120

Query: 121 WGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAE 180
           WGF RSNSV+++S K S  SLPLLSRSNSTGSV+  K  PL  DVK QS  LQRQ SV+E
Sbjct: 121 WGFGRSNSVTYDSRKSSLCSLPLLSRSNSTGSVQNPKRTPL-KDVKGQSPLLQRQHSVSE 180

Query: 181 GKSKSS-----FSNSAANSYSKLQK-SQKKNHGGFYGKNLQVNHILNVPPPYITKETANI 240
           GKSKSS     FSNSAANSYSKLQK   KKN GGFYG NL +N ILNVPPPYITKETANI
Sbjct: 181 GKSKSSFLAPPFSNSAANSYSKLQKPHHKKNQGGFYGNNLCINPILNVPPPYITKETANI 240

Query: 241 FGLSSLLR-GSKEKKIKK 250
           FGLSSLLR G KEKK +K
Sbjct: 241 FGLSSLLRGGGKEKKNRK 256

[Close]

BLAST of Sed0009603.1 vs. ExPASy TrEMBL
Match: A0A6J1ERX4 (uncharacterized protein LOC111436997 OS=Cucurbita moschata OX=3662 GN=LOC111436997 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 9.5e-80
Identity = 174/233 (74.68%), Postives = 195/233 (83.69%), Query Frame = 0


Query: 19  SDLLPVDSNSDFEFCVSGGFDCESSSADELFFNGVIVPSQNQQSFVKSKQTHQRESAVLS 78
           +D+  +DSNS+FEFCVSG FD ESSSADELFFNGVIVP+QNQQ FV+ K+THQRESA   
Sbjct: 12  TDISLLDSNSEFEFCVSGSFDYESSSADELFFNGVIVPTQNQQKFVQIKRTHQRESAPCF 71

Query: 79  PSSLPPLPPSVATENSKK--TEEFVHVVNNSESEKKTRSKSFWGFRRSNSVSFESGKGSF 138
           PSSLPPLPP+VATEN KK  TEE +HV+ NS+SEKK RSKSFWGFRRSNSV++++ K SF
Sbjct: 72  PSSLPPLPPAVATENFKKVNTEEPIHVM-NSDSEKKNRSKSFWGFRRSNSVTYDNRKSSF 131

Query: 139 FSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAEGKSKSSFSNSAANSYSKL 198
           FSLPLLSRS STGSV+  KG P   DVKSQS QLQR  SV+EGKSK   S+SAANS+SKL
Sbjct: 132 FSLPLLSRSYSTGSVQIPKGMP-SKDVKSQSPQLQRHHSVSEGKSKLPSSSSAANSHSKL 191

Query: 199 QKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIFGLSSLLRGSKEKKIKK 250
           QK QKKN GG YG NL VN ILNVPPPYITKET+ IFGLSSLLRGSKEKK +K
Sbjct: 192 QKPQKKNQGGLYGNNLYVNPILNVPPPYITKETSKIFGLSSLLRGSKEKKNRK 242

[Close]

BLAST of Sed0009603.1 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-18
Identity = 87/267 (32.58%), Postives = 134/267 (50.19%), Query Frame = 0


Query: 10  ISLSNDLVFSDLLPVD---------------SNSDFEFCVSGG------FDCESSSADEL 69
           IS S D   SD +P++               S+ DF+FC+ GG      FD  S SADEL
Sbjct: 16  ISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPGGVNSGESFDQGSWSADEL 75

Query: 70  FFNGVIVPSQNQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSE 129
           F NG I+P++      K  +  ++E       S P         N ++ E+ V +     
Sbjct: 76  FSNGKILPTE----IKKKPEPGKKEPEPKPVKSKPDSRKQRKQPNEEQQEDDVIIT---- 135

Query: 130 SEKKTRSKSFWGFRRSNSVSFESGKG-SFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQS 189
           +E+KT +KSFWGF+RS+S++  S  G S   LPLL+RSNSTGS  +   K      +  +
Sbjct: 136 TEEKTNTKSFWGFKRSSSLNCGSTYGRSLCPLPLLNRSNSTGSTSS---KQKQSSSRKHN 195

Query: 190 SQLQRQVSVAEGKSKSSFSNSAANSYSKLQKSQKKNHGGF-YGKN----LQVNHILNVPP 249
             ++ Q S +   S S+ S+ + N +SK     KK++GG+ YG +    ++V+ ++NV P
Sbjct: 196 EHVKLQQSSSLSSSSSASSSLSNNGFSK--PPLKKSYGGYSYGSHGGGGIRVSPVINVVP 255

[Close]

BLAST of Sed0009603.1 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16
Identity = 86/250 (34.40%), Postives = 126/250 (50.40%), Query Frame = 0


Query: 3   STKCPTEISLSNDLVFSDLLPVD-SNSDFEFCVSGGFD-CESSSADELFFNGVIVPSQNQ 62
           S K P  +   + L+  D   +D SNSDFEF +S  FD  +SS ADE+F +G+I+P    
Sbjct: 19  SDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFADGMILPFHVT 78

Query: 63  QSFVKSKQTHQRE----SAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSK 122
            +    K+ ++ E    ++ LSPS L P P  + T++S+K         NS+SE +  SK
Sbjct: 79  AASTVPKRLYKYELPPITSSLSPSPLSPQP--LPTKHSEKETNGRASGANSDSEAEKSSK 138

Query: 123 SFWGFRRSNSVSFESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSV 182
           SFW F+RS+S++ +  K    S P L+RSNSTGSV   K + ++ DV +           
Sbjct: 139 SFWSFKRSSSLNCDIKKSLICSFPRLTRSNSTGSVTNSK-RAMLRDVNNH---------- 198

Query: 183 AEGKSKSSFSNSAANSYS-KLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIFGL 242
                + S  +S  N+Y  + QK   K   G  G +  V  +LN P         + FGL
Sbjct: 199 -----RPSSRSSCCNAYQFRPQKHTGKKGEG--GGSFSVIPVLNGP---------STFGL 239

Query: 243 SSLLRGSKEK 246
            S+LR S  K
Sbjct: 259 GSILRHSNSK 239

[Close]

BLAST of Sed0009603.1 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 7.3e-16
Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 0


Query: 26  SNSDFEFCVSGGFD-CESSSADELFFNGVI---VPSQNQQSFVKSKQTHQRE-----SAV 85
           SNSDFEF +S  FD  +SS ADE+F +G+I   +P Q   +    K+ ++ E     SA 
Sbjct: 44  SNSDFEFHISSNFDPGDSSPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAP 103

Query: 86  LSPSSLPPLPPSVATENSK-KTEEFVHVVN------NSESEKKTRSKSFWGFRRSNSVSF 145
              S LPPLP  +   + K   +E    +N      NS+SE +  SKSFW F+RS+S++ 
Sbjct: 104 TLSSYLPPLPLPLPEHSRKYSVKETRGSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNC 163

Query: 146 ESGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQVSVAEGKSKSSF---- 205
           +  K    S P L+RSNSTGSV   K + ++ D+   SS  QR      G + SS     
Sbjct: 164 DIKKSLICSFPRLTRSNSTGSVAISK-REMLRDINKHSS--QRHGVPRPGVNPSSHMRPP 223

Query: 206 SNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPPYITKETANIFGLSSLLRGSKEK 249
           S+   +SY    +     +GG  G +  +  ++  P P         FGL S+LR +KEK
Sbjct: 224 SSFCCSSYQFRPQKHAGKNGGGRGGSFWIAPVIGGPSP---------FGLGSILRLTKEK 274

[Close]

BLAST of Sed0009603.1 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-07
Identity = 78/260 (30.00%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 10  ISLSNDL-------VFSDLLPVDSNSDFEFCVSGGFDC---ESSSADELFFNGVIVPSQ- 69
           IS S DL       V  D   +DS S+F+FC   G  C   E S ADELF  G I+P Q 
Sbjct: 19  ISFSYDLDSTDDGEVRLDSTLLDSGSEFDFCF--GSSCSVQEVSPADELFSEGKILPVQI 78

Query: 70  -NQQSFVKSKQTHQRESAVLSPSSLPPLPPSVATENSKKTEEFVHVVNNSESEKKTRSKS 129
             ++S  ++       SA LS SS      S ++   +K      ++ N ES+ + + + 
Sbjct: 79  KKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAPEKKMRLKELLLNPESDFEDKPRG 138

Query: 130 -FWGFRRSNSVSFE---SGKGSFFSLPLLSRSNSTGSVETQKGKPLMMDVKSQSSQLQRQ 189
            F  F+RS S++++   + KG   S   LSRSNST +       P +  +  ++    + 
Sbjct: 139 LFLQFKRSISLNYDKSRNSKGLIRSFHFLSRSNSTPN-------PNLDLLPKETHHPHKT 198

Query: 190 VSVAEGK----SKSSFSNSAANSYSKLQKSQKKNHGGFYGKNLQVNHILNVPPP-YITKE 249
            ++ + K      SS S+S+   YSK  K   +N  G     ++V+ +LN PPP +I+  
Sbjct: 199 HNLPKHKPPLRRSSSLSSSSVPFYSK--KPLGRNSFGNGNGGVRVSPVLNFPPPAFISNV 258

The following BLAST results are available for this feature:

BLAST of Sed0009603.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901379.1	9.7e-87	72.73	PREDICTED: uncharacterized protein LOC103494135 [Cucumis melo]	[more]
KAA0058088.1	9.7e-87	72.73	vitellogenin-2 [Cucumis melo var. makuwa] >TYK28441.1 vitellogenin-2 [Cucumis me...	[more]
XP_011660341.1	2.8e-86	72.94	uncharacterized protein LOC105436374 [Cucumis sativus] >KGN63833.1 hypothetical ...	[more]
XP_038898781.1	1.3e-83	72.69	uncharacterized protein LOC120086289 [Benincasa hispida]	[more]
XP_022134776.1	7.9e-81	73.26	uncharacterized protein LOC111006964 [Momordica charantia]	[more]

BLAST of Sed0009603.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009603.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USG1	4.7e-87	72.73	Vitellogenin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00730...	[more]
A0A1S4DZJ3	4.7e-87	72.73	uncharacterized protein LOC103494135 OS=Cucumis melo OX=3656 GN=LOC103494135 PE=...	[more]
A0A0A0LPT8	1.4e-86	72.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024190 PE=4 SV=1	[more]
A0A6J1BYR0	3.8e-81	73.26	uncharacterized protein LOC111006964 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1ERX4	9.5e-80	74.68	uncharacterized protein LOC111436997 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]

BLAST of Sed0009603.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67050.1	3.5e-18	32.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48780.1	1.9e-16	34.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G18300.1	7.3e-16	35.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G68330.1	6.2e-07	30.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94
None	No IPR available	PANTHER	PTHR36757	BNAANNG22500D PROTEIN	coord: 1..249

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009603	Sed0009603	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009603.1-exon	Sed0009603.1-exon-LG12:31597897..31598664	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009603.1-cds	Sed0009603.1-cds-LG12:31597897..31598646	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009603.1-three_prime_utr	Sed0009603.1-three_prime_utr-LG12:31598647..31598664	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009603.1	Sed0009603.1-protein	polypeptide