Sed0007930.1 (mRNA) Chayote v1

Overview


Name	Sed0007930.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG05: 36092316 .. 36094588 (-)
Sequence length	978
RNA-Seq Expression	Sed0007930.1
Synteny	Sed0007930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTGAGCCCTCCTTCACACACAACCACCACCAACCCCCCTACTGCTACAACCTTCCACCTCTACTACTGCTACCAATGCCAACGAGCCGTTACCCTCGCCCCTCCCGACCTGTCGCAGCTCATCTGCCCGCGCTGCTCCGGCCAGTTCCTCGAGGAGCTCCACCTCACCCGCCCCCAACTCGAACCCTCTCCCGAGGATCGTGTACTTGAAGCCCTCTCCCTAATGCTCCAACCTCCCGTTCGCCTCTTTCGATTCCCTGACCCAAACCGCATCCATCCACTACCGCAACGGTTCGACGATTTTGATCGACGATCGTTCAGCGATCCCGAAGGAGACGAATGGTTCCCCTGGAGAGCACGACGGCGTACTCGAAGCCTAGACGAGAGGAACAATTCCGGCCTGCAACCACCAAATCCAAACCGGTCTACGACCGTTATCTTTCTAAGACCTGCAGACCCATCTCGACCGATAATCCCACCAAGAGGAGACCCGAGAGACTACTTCACCGGACCACGACTCGACGAGTTGATCGAGGAGTTAACACAGAACGACCGCCCGGGGCCACCACCGGCAACGGAGGGGGCAATAGAAGGGATACCGACAGTTACGATAACAGCAGAGCATCTAAAAAACGACTCGACATGTCCAGTTTGTAAGGAAGAGTTTGTGGTGGGGGGAGAAGCAAGGGAATTAAGATGCAAGCATATATACCATTCTGAGTGCATAGTGCCATGGCTTAGGCTTCACAACTCTTGCCCGGTATGCCGGCAAGAGATGCCGCCATCGCCTTCGCCGCAGAACCCGAGGGGGCCCTCGGGTTCTGACGATGAAGAAGGGATGGGGAGGAGATGTGCTAGGTGGTTCGGTCAGTTGGTGCCTAGGCCATTTCGAAATAGGTATAGGCAGCTTAGTCCTCCACAGGACCGATACAATTCATCTGGAGGTGATGCCTAATTTATTTGCTAATATCTTCAATTATGGTAAAATGTTTCTGCTAGTATTCATATAAATATAAGGTATTCAAATTAAATAAAGTTTGTTATACAATAGTTAGGAATTACTCCATGTTGGTGTATTCTCAGCAATCAATGTCTGTATAATAACGAACTACAAATCATTTGCCAAAATAAATTTGAATAATTGGCACGTATTTTAAGTTAAGAGTTTGCACGTTCAAATCATAGTCCAAAGTTGTGAATCCAAAAATAAATAAAATCATGTTTAAAACTTAAAATGGGTATATTGGATGGATGACCATTTCCTACATAACATATTACAAAAATAATAAAAATAAAACGATCTAGATAAAATTTAACAAAATATTACACAAAAAATACAGGAAAAAACTTATTTTAATCCCTAGTTTAGGATGTAATTTCTATATAGTCTATTTGATTTAAAATTTAACATTTTAATACTATTCAATTTTAGTTTTAGAGATGACTTGATGTTGACTAGATTTTTTTTTTAAAGATTAATGAATATTTAAATTTCAATATATGGATGAAAATATTATATTTTTTTTCTTAATATGAATTTATTTTTTAAATAACCAAACTAAAAAGAAAAAAGACATAAAAGTTATGAAAATTGAGCATCATTAAAATTTCAAAATAAAATATTTAATTTGAAAAAGAGGCCAAATCTAAAGGCAAAAAAGGTATTTTCTAAAAACAAATATAGAAGCAAATCTGAACAAGTTTTTTTTAATAGTATTAAAAAAGAATACTTTAACCATAGAGGTTCAAATAACGATCAAATATACTGAATAGTGTAAATAAAAGATACGAAACTTAATGGCTTTATAATAAAATAGTGATGTATTTTTCTAAATTGGAAATAAAAGCATAGAAGATTTTTTAAAATGCTACTGGTGAAATGCAAAATCCTTTTTTCCTTCAAACACAGATTCTGACTCACATTTTATTCCGTTTTCCAGAACGCAATTCACGTGGTGGTTCATTCTACTTCTCCATCTTAGCGTTTCTAATGTCCATGATTATGCTGCAAATTACTCGGATTTTACTTGAACGACTTCATTAGGTATTTAAATACGTATGCAAATGGTATGTATGATGAAACTCCGATGTCTTTGCAGACCTTATAATTGTTCCAAAGCACTAATCAGATGATTTACACCCCATTTGATAACTATTTTTAACCCTACATACAACAACTTCATCATATGTTTTATTATTTTTGAAATTTGGTTATCATTCAACTATTTTTTAAAGAAAGATGAAACACAATGTAGGAAATTTATGTAA

mRNA sequence

ATGTCTTTGAGCCCTCCTTCACACACAACCACCACCAACCCCCCTACTGCTACAACCTTCCACCTCTACTACTGCTACCAATGCCAACGAGCCGTTACCCTCGCCCCTCCCGACCTGTCGCAGCTCATCTGCCCGCGCTGCTCCGGCCAGTTCCTCGAGGAGCTCCACCTCACCCGCCCCCAACTCGAACCCTCTCCCGAGGATCGTGTACTTGAAGCCCTCTCCCTAATGCTCCAACCTCCCGTTCGCCTCTTTCGATTCCCTGACCCAAACCGCATCCATCCACTACCGCAACGGTTCGACGATTTTGATCGACGATCGTTCAGCGATCCCGAAGGAGACGAATGGTTCCCCTGGAGAGCACGACGGCGTACTCGAAGCCTAGACGAGAGGAACAATTCCGGCCTGCAACCACCAAATCCAAACCGGTCTACGACCGTTATCTTTCTAAGACCTGCAGACCCATCTCGACCGATAATCCCACCAAGAGGAGACCCGAGAGACTACTTCACCGGACCACGACTCGACGAGTTGATCGAGGAGTTAACACAGAACGACCGCCCGGGGCCACCACCGGCAACGGAGGGGGCAATAGAAGGGATACCGACAGTTACGATAACAGCAGAGCATCTAAAAAACGACTCGACATGTCCAGTTTGTAAGGAAGAGTTTGTGGTGGGGGGAGAAGCAAGGGAATTAAGATGCAAGCATATATACCATTCTGAGTGCATAGTGCCATGGCTTAGGCTTCACAACTCTTGCCCGGTATGCCGGCAAGAGATGCCGCCATCGCCTTCGCCGCAGAACCCGAGGGGGCCCTCGGGTTCTGACGATGAAGAAGGGATGGGGAGGAGATGTGCTAGGTGGTTCGGTCAGTTGGTGCCTAGGCCATTTCGAAATAGGTATAGGCAGCTTAGTCCTCCACAGGACCGATACAATTCATCTGGAGATGAAACACAATGTAGGAAATTTATGTAA

Coding sequence (CDS)

ATGTCTTTGAGCCCTCCTTCACACACAACCACCACCAACCCCCCTACTGCTACAACCTTCCACCTCTACTACTGCTACCAATGCCAACGAGCCGTTACCCTCGCCCCTCCCGACCTGTCGCAGCTCATCTGCCCGCGCTGCTCCGGCCAGTTCCTCGAGGAGCTCCACCTCACCCGCCCCCAACTCGAACCCTCTCCCGAGGATCGTGTACTTGAAGCCCTCTCCCTAATGCTCCAACCTCCCGTTCGCCTCTTTCGATTCCCTGACCCAAACCGCATCCATCCACTACCGCAACGGTTCGACGATTTTGATCGACGATCGTTCAGCGATCCCGAAGGAGACGAATGGTTCCCCTGGAGAGCACGACGGCGTACTCGAAGCCTAGACGAGAGGAACAATTCCGGCCTGCAACCACCAAATCCAAACCGGTCTACGACCGTTATCTTTCTAAGACCTGCAGACCCATCTCGACCGATAATCCCACCAAGAGGAGACCCGAGAGACTACTTCACCGGACCACGACTCGACGAGTTGATCGAGGAGTTAACACAGAACGACCGCCCGGGGCCACCACCGGCAACGGAGGGGGCAATAGAAGGGATACCGACAGTTACGATAACAGCAGAGCATCTAAAAAACGACTCGACATGTCCAGTTTGTAAGGAAGAGTTTGTGGTGGGGGGAGAAGCAAGGGAATTAAGATGCAAGCATATATACCATTCTGAGTGCATAGTGCCATGGCTTAGGCTTCACAACTCTTGCCCGGTATGCCGGCAAGAGATGCCGCCATCGCCTTCGCCGCAGAACCCGAGGGGGCCCTCGGGTTCTGACGATGAAGAAGGGATGGGGAGGAGATGTGCTAGGTGGTTCGGTCAGTTGGTGCCTAGGCCATTTCGAAATAGGTATAGGCAGCTTAGTCCTCCACAGGACCGATACAATTCATCTGGAGATGAAACACAATGTAGGAAATTTATGTAA

Protein sequence

MSLSPPSHTTTTNPPTATTFHLYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQDRYNSSGDETQCRKFM

Homology

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BLAST of Sed0007930.1 vs. NCBI nr
Match: XP_022941465.1 (E3 ubiquitin-protein ligase RZF1-like [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 4.1e-130
Identity = 233/304 (76.64%), Postives = 255/304 (83.88%), Query Frame = 0


Query: 16  TATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEAL 75
           T ++FH Y+C+QC R VTLA   D S+LIC RCSGQFLEELHLTRPQ + SPE R+LEAL
Sbjct: 9   TRSSFHFYWCHQCHRMVTLATTRDPSELICSRCSGQFLEELHLTRPQFDNSPETRLLEAL 68

Query: 76  SLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNS 135
           SLML PPVRLFR PD +R  P+  +FD+FDR+SFSDPEGDEWF WR RRR RSLDER+NS
Sbjct: 69  SLMLDPPVRLFRLPDIDRRRPMLHQFDNFDRQSFSDPEGDEWFHWRTRRRNRSLDERDNS 128

Query: 136 GLQPPNPNRSTTVIFLRPADPSR---PIIPPRGDPRDYFTGPRLDELIEELTQNDRPGPP 195
            LQPPN NRS TVI LRP DPSR   PIIPPR DPRDYFTGPRLDELIEELTQNDRPGP 
Sbjct: 129 SLQPPNQNRSRTVIILRPTDPSRPVQPIIPPRADPRDYFTGPRLDELIEELTQNDRPGPQ 188

Query: 196 PATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLH 255
           PA+E AIE IPTV I AEHLKND+ CPVCKEEF +G EAREL CKH+YHSECIVPWLRLH
Sbjct: 189 PASEAAIERIPTVKIAAEHLKNDTMCPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLH 248

Query: 256 NSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQDR 315
           NSCPVCRQEMPPSP P+N    S SDDEEG+GRRC RW+GQLV RPFR+RYRQLSPPQD 
Sbjct: 249 NSCPVCRQEMPPSP-PENQAAES-SDDEEGIGRRCTRWWGQLVNRPFRSRYRQLSPPQDS 308

[Close]

BLAST of Sed0007930.1 vs. NCBI nr
Match: XP_023525796.1 (E3 ubiquitin-protein ligase RZF1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 6.0e-129
Identity = 231/305 (75.74%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 16  TATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEAL 75
           T ++FH Y+C+QC R VTLA   D S+LICPRCS QFLEELHLTRPQ + SPE R+L+AL
Sbjct: 9   TRSSFHFYWCHQCHRMVTLATAGDPSELICPRCSAQFLEELHLTRPQFDNSPETRLLQAL 68

Query: 76  SLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNS 135
           SLML PPVRLFR PD +R  P   +FD+FDRRSFSDPEGDEWF WR RRR RSLDER+NS
Sbjct: 69  SLMLDPPVRLFRLPDLDRRRPTSHQFDNFDRRSFSDPEGDEWFHWRTRRRNRSLDERDNS 128

Query: 136 GLQPPNPNRSTTVIFLRPADPSR---PIIPPRGDPRDYFTGPRLDELIEELTQNDRPGPP 195
            LQPPN NRS TVI LRP D SR   PIIPPR DPRDYFTGPRLDELIEELTQNDRPGP 
Sbjct: 129 SLQPPNQNRSRTVIILRPTDQSRPVQPIIPPRTDPRDYFTGPRLDELIEELTQNDRPGPQ 188

Query: 196 PATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLH 255
           PA+E AIE IPTV I AEHLKNDS CPVCKEEF +G EAREL CKH+YHSECIVPWLRLH
Sbjct: 189 PASEAAIERIPTVKIAAEHLKNDSACPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLH 248

Query: 256 NSCPVCRQEMPPSPSPQNPRGPSGSDDE-EGMGRRCARWFGQLVPRPFRNRYRQLSPPQD 315
           NSCPVCRQEMPPSP P+N    S  D E EG+GRRC RW+GQLV RPFR+RYRQ+SPPQD
Sbjct: 249 NSCPVCRQEMPPSP-PENQEAESSEDGEGEGIGRRCTRWWGQLVNRPFRSRYRQISPPQD 308

[Close]

BLAST of Sed0007930.1 vs. NCBI nr
Match: XP_022981032.1 (E3 ubiquitin-protein ligase RZF1-like [Cucurbita maxima])

HSP 1 Score: 468.0 bits (1203), Expect = 6.6e-128
Identity = 232/304 (76.32%), Postives = 252/304 (82.89%), Query Frame = 0


Query: 16  TATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEAL 75
           T  +FHLY+C+QC R VTLA   D S+LIC RCSGQFLEELHLTRPQ + SPE R+LEAL
Sbjct: 9   TRPSFHLYWCHQCHRMVTLATAGDPSELICSRCSGQFLEELHLTRPQFDNSPETRLLEAL 68

Query: 76  SLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNS 135
           SLML PPVRLFR PD +R  P+  +FD+FDRRSFSDPEGDEWF  R RRR RSLDER+NS
Sbjct: 69  SLMLDPPVRLFRLPDLDRRRPMSHQFDNFDRRSFSDPEGDEWFHGRTRRRNRSLDERDNS 128

Query: 136 GLQPPNPNRSTTVIFLRPADPSRP---IIPPRGDPRDYFTGPRLDELIEELTQNDRPGPP 195
            L PPN NRS T I LRP DPSRP   IIPPR DP DYFTGPRLDELIEELTQNDRPGP 
Sbjct: 129 SLLPPNQNRSRTFIILRPTDPSRPVQTIIPPRADPGDYFTGPRLDELIEELTQNDRPGPQ 188

Query: 196 PATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLH 255
           PA+E AIE IPTV I AEHLKNDS CPVCKEEF +G EAREL CKH+YHSECIVPWLRLH
Sbjct: 189 PASEAAIERIPTVKIAAEHLKNDSMCPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLH 248

Query: 256 NSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQDR 315
           NSCPVCRQEMPPSP P+N    S S+DEEG+GRRC RW+GQLV RPFR+RYRQLSPPQDR
Sbjct: 249 NSCPVCRQEMPPSP-PENQAAES-SEDEEGIGRRCTRWWGQLVNRPFRSRYRQLSPPQDR 308

[Close]

BLAST of Sed0007930.1 vs. NCBI nr
Match: KAG7031679.1 (E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463.8 bits (1192), Expect = 1.2e-126
Identity = 232/320 (72.50%), Postives = 255/320 (79.69%), Query Frame = 0


Query: 1   MSLSPPSHTTTTNPPTATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTR 60
           MS +   HT       +++FH Y+C+QC R VTLA   D S+LIC RCSGQFLEELHLTR
Sbjct: 1   MSFASSRHT------RSSSFHFYWCHQCHRMVTLATTGDPSELICSRCSGQFLEELHLTR 60

Query: 61  PQLEPSPEDRVLEALSLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPW 120
            Q + SPE R+LEALSLML PPVRLFR PD +R  P+  +FD+FDR+SFSDPEGDEWF W
Sbjct: 61  RQFDNSPETRLLEALSLMLDPPVRLFRLPDIDRRRPMLHQFDNFDRQSFSDPEGDEWFHW 120

Query: 121 RARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPADPSR---PIIPPRGDPRDYFTGPRLD 180
           R RRR RSLDER NS LQPPN NRS TVI LRP DPSR   PIIPPR DPRDYFTGPRLD
Sbjct: 121 RTRRRNRSLDERENSSLQPPNQNRSRTVIILRPTDPSRPVQPIIPPRADPRDYFTGPRLD 180

Query: 181 ELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCK 240
           ELIEELTQNDRPGP PA+E AIE IPTV I  EHLKND+ CPVCKEEF +G EAREL CK
Sbjct: 181 ELIEELTQNDRPGPQPASEAAIERIPTVKIATEHLKNDTMCPVCKEEFEIGEEARELMCK 240

Query: 241 HIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSGSDDE-EGMGRRCARWFGQLVP 300
           H+YHSECIVPWLRLHNSCPVCRQEMPPSP P+N    S  D E EG+GRRC RW+GQLV 
Sbjct: 241 HVYHSECIVPWLRLHNSCPVCRQEMPPSP-PENQEAESSEDGEGEGIGRRCTRWWGQLVN 300

Query: 301 RPFRNRYRQLSPPQDRYNSS 316
           RP R+RYRQLSPPQDR+NSS
Sbjct: 301 RPSRSRYRQLSPPQDRHNSS 313

[Close]

BLAST of Sed0007930.1 vs. NCBI nr
Match: KAG6608050.1 (E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-121
Identity = 222/291 (76.29%), Postives = 240/291 (82.47%), Query Frame = 0


Query: 32  VTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPVRLFRFPDP 91
           VTLA   D S+LIC RCSGQFLEELHLTRPQ + SPE R+LEALSLML PPVRLFR PD 
Sbjct: 2   VTLATTGDPSELICSRCSGQFLEELHLTRPQFDNSPETRLLEALSLMLDPPVRLFRLPDI 61

Query: 92  NRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQPPNPNRSTTVIFL 151
           +R  P+  +FD+FDR+SFSDPEGDEWF WR RRR RSLDER+NS LQPPN NRS TVI L
Sbjct: 62  DRRRPMLHQFDNFDRQSFSDPEGDEWFHWRTRRRNRSLDERDNSSLQPPNQNRSRTVIIL 121

Query: 152 RPADPSR---PIIPPRGDPRDYFTGPRLDELIEELTQNDRPGPPPATEGAIEGIPTVTIT 211
           RP DPSR   PIIPPR DPRDYFTGPRLDELIEELTQNDRPGP PA+E AIE IPTV I 
Sbjct: 122 RPTDPSRPVQPIIPPRADPRDYFTGPRLDELIEELTQNDRPGPQPASEAAIERIPTVKIA 181

Query: 212 AEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLHNSCPVCRQEMPPSPSP 271
            EHLKND+ CPVCKEEF +G EAREL CKH+YHSECIVPWLRLHNSCPVCRQEMPPSP P
Sbjct: 182 TEHLKNDTMCPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLHNSCPVCRQEMPPSP-P 241

Query: 272 QNPRGPSGSDDE---EGMGRRCARWFGQLVPRPFRNRYRQLSPPQDRYNSS 316
           +N    S  D E   EG+GRRC RW+GQLV RP R+RYRQLSPPQDR+NSS
Sbjct: 242 ENQEAESSEDGEGEGEGIGRRCTRWWGQLVNRPSRSRYRQLSPPQDRHNSS 291

[Close]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-33
Identity = 112/326 (34.36%), Postives = 151/326 (46.32%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPV 82
           ++C++CQRAV L      + +C  C G F+EEL +     + SP D       ++     
Sbjct: 8   HWCHRCQRAVRLHG---QEPVCFYCGGGFVEELDMA----QASPFDMFRSHRGVV----- 67

Query: 83  RLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQP---- 142
                 + ++   L   F  F R   ++   D       R RT S    N  GL P    
Sbjct: 68  ------ERDQTFDLMDAFSVFMRNRLAERSHDR----EIRGRTISSGPENFPGLAPLLIF 127

Query: 143 --PNPNRST----TVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQ-NDRPGPP 202
               P R T             P   I   RG+  DYF GP L+EL E+L+    R GPP
Sbjct: 128 GGQVPYRLTGDNAVEALFNGGSPGIGI--TRGNTGDYFFGPGLEELFEQLSAGTTRRGPP 187

Query: 203 PATEGAIEGIPTVTITAEHLK-NDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRL 262
           PA   AI+ +PT+ I   HL+ +DS CPVCK+EF +G EA+++ C HIYHS+CIVPWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 263 HNSCPVCRQEMPPSPSP---QNPRGP-----------SGSDDEEGMGRR---CARWFGQL 320
           HNSCPVCRQE+P +  P   QN   P           S +  E G  RR    + W    
Sbjct: 248 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFW---- 302

[Close]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.9e-33
Identity = 104/308 (33.77%), Postives = 148/308 (48.05%), Query Frame = 0


Query: 23  YYCYQCQRA--VTLAPPDLSQLICPRCSGQFLEELHLTRPQ-----LEPSPEDRVLEALS 82
           ++CYQC R   VT++PP  S   CP C+  FLEE     P      L P+P       L 
Sbjct: 23  FFCYQCNRTVNVTISPPS-SDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLF 82

Query: 83  LMLQPP---VRLFRFPDPNRIHPLPQRFDDFDRRSFSDP----EGDEWFPWRARRRTRSL 142
           L L  P   +    FP  +          D +  S S P     GD +           L
Sbjct: 83  LTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHL 142

Query: 143 DERNNSGLQPPNPNRSTTVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQND-- 202
           ++  +SG Q         + F+   +PS        +  DYF GP L++LI++L +ND  
Sbjct: 143 NDLRSSGAQ---------IEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPN 202

Query: 203 RPGPPPATEGAIEGIPTVTITAEHLKND-STCPVCKEEFVVGGEARELRCKHIYHSECIV 262
           R G PPA++ AIE +P V IT  +L ++ + C VC ++F  G EA+++ CKH+YH +C++
Sbjct: 203 RYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLL 262

Query: 263 PWLRLHNSCPVCRQEMPPSPSPQNPR-----GPSGSDDEEGMGRR-------CARWFGQL 302
           PWL LHNSCPVCR E+P        R     G SG +D +  G+R         R F   
Sbjct: 263 PWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRIS 320

[Close]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32
Identity = 100/306 (32.68%), Postives = 157/306 (51.31%), Query Frame = 0


Query: 22  LYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPP 81
           +++CYQC + VT++    +   CP C+  FLEE        +P+P     ++L+      
Sbjct: 20  MFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE------DPNPN----QSLNFNPNSS 79

Query: 82  VRLFRFPDP-NRIHPL--------PQRFDDFD----------RRSFSDPEGDEWFPWRAR 141
              F   DP + + PL        P   D             R +  +P+ D + P+   
Sbjct: 80  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFL 139

Query: 142 RRTRSLDERNNSGLQPPNPNRSTTVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEEL 201
           +    L    +SG           VI   P+DP   +    G+  DYF GP L++LI++L
Sbjct: 140 Q--NHLQTLRSSG------THFEFVIENHPSDPGNRM---PGNFGDYFFGPGLEQLIQQL 199

Query: 202 TQND--RPGPPPATEGAIEGIPTVTITAEHLKND-STCPVCKEEFVVGGEARELRCKHIY 261
            +ND  R G PPA++ AI+ +PTV +T + LK++ + C VC +EF  G + +++ CKH++
Sbjct: 200 AENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 259

Query: 262 HSECIVPWLRLHNSCPVCRQEMP-PSPSPQN-PRGPSGSDDEEGM--GRRCARWFGQLVP 302
           H +C++PWL LHNSCPVCR E+P   P  +N  +G  GS D +G   G++  R+  QL P
Sbjct: 260 HQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQL-P 303

[Close]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.4e-32
Identity = 98/272 (36.03%), Postives = 140/272 (51.47%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHL----TRPQLEPSPEDRVLEALSLML 82
           ++C++CQRAV L   D    +C  C G F+EE+ +        +E  P   ++EA S  +
Sbjct: 8   HWCHRCQRAVWLRARD---AVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 67

Query: 83  QPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQP 142
           +      R  + +    +  R       SFS+      F  +A  R    D         
Sbjct: 68  RS-----RLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGD--------- 127

Query: 143 PNPNRSTTVIFLRPADPSRPIIPPRG-DPRDYFTGPRLDELIEELTQ-NDRPGPPPATEG 202
                S+   F+  A P   I   RG +  DYF GP L+ELIE+L+      GPPPA + 
Sbjct: 128 ----NSSVEAFVNGAAPGIGI--ARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKS 187

Query: 203 AIEGIPTVTITAEHLK-NDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLHNSCP 262
           +I+ +PT+ IT +HLK +DS CPVCK+EF +  EA+++ C HIYHS+CIVPWL  HNSCP
Sbjct: 188 SIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCP 247

Query: 263 VCRQEMP---PSPSPQNPRGPSGSDDEEGMGR 285
           VCR+E+P    S S Q+ +  S +  E    R
Sbjct: 248 VCRKELPSRGSSSSTQSSQNRSTNGRENSRRR 256

[Close]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 94/291 (32.30%), Postives = 126/291 (43.30%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPV 82
           Y+C+ C   +    P L   ICPRC   F+EEL           E R  E  S     P 
Sbjct: 11  YFCHCCSVEIV---PRLPDYICPRCESGFIEEL---------PEETRNTENGSAPSTAPT 70

Query: 83  RLFRFPDPN---RIHPLPQRFDDFDRRSFSDPEGDEWFPWRAR---------RRTRSLDE 142
              R P  N    +  LPQ +  F    F D      FP  A+         RR R    
Sbjct: 71  DQNRQPFENVDQHLFTLPQGYSQFAFGIFDDSFEIPTFPPGAQADDGRDPESRREREHQS 130

Query: 143 RNNSGLQPP----NPNRST-----------------TVIFLRPADPSRPIIP---PRGDP 202
           R+  G + P       R+T                   I    A PS  + P      +P
Sbjct: 131 RHRYGARQPRARLTARRATGRHEGVPTLEGIIQQLVNGIISPAAVPSLGLGPWGVLHSNP 190

Query: 203 RDYFTGPR-LDELIEE-LTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEF 262
            DY  G   LD +I + L Q +  GPPPA +  I+ +PTV +T EH+ +   CPVCKE++
Sbjct: 191 MDYAWGANGLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDY 250

Query: 263 VVGGEARELRCKHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSG 276
            +G   R+L C H++H  CIVPWL  H+SCPVCR+ +    +  NP G +G
Sbjct: 251 ALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTG 289

[Close]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL
Match: A0A6J1FTR5 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446755 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.0e-130
Identity = 233/304 (76.64%), Postives = 255/304 (83.88%), Query Frame = 0


Query: 16  TATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEAL 75
           T ++FH Y+C+QC R VTLA   D S+LIC RCSGQFLEELHLTRPQ + SPE R+LEAL
Sbjct: 9   TRSSFHFYWCHQCHRMVTLATTRDPSELICSRCSGQFLEELHLTRPQFDNSPETRLLEAL 68

Query: 76  SLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNS 135
           SLML PPVRLFR PD +R  P+  +FD+FDR+SFSDPEGDEWF WR RRR RSLDER+NS
Sbjct: 69  SLMLDPPVRLFRLPDIDRRRPMLHQFDNFDRQSFSDPEGDEWFHWRTRRRNRSLDERDNS 128

Query: 136 GLQPPNPNRSTTVIFLRPADPSR---PIIPPRGDPRDYFTGPRLDELIEELTQNDRPGPP 195
            LQPPN NRS TVI LRP DPSR   PIIPPR DPRDYFTGPRLDELIEELTQNDRPGP 
Sbjct: 129 SLQPPNQNRSRTVIILRPTDPSRPVQPIIPPRADPRDYFTGPRLDELIEELTQNDRPGPQ 188

Query: 196 PATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLH 255
           PA+E AIE IPTV I AEHLKND+ CPVCKEEF +G EAREL CKH+YHSECIVPWLRLH
Sbjct: 189 PASEAAIERIPTVKIAAEHLKNDTMCPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLH 248

Query: 256 NSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQDR 315
           NSCPVCRQEMPPSP P+N    S SDDEEG+GRRC RW+GQLV RPFR+RYRQLSPPQD 
Sbjct: 249 NSCPVCRQEMPPSP-PENQAAES-SDDEEGIGRRCTRWWGQLVNRPFRSRYRQLSPPQDS 308

[Close]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL
Match: A0A6J1ISV3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111480302 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.2e-128
Identity = 232/304 (76.32%), Postives = 252/304 (82.89%), Query Frame = 0


Query: 16  TATTFHLYYCYQCQRAVTLAPP-DLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEAL 75
           T  +FHLY+C+QC R VTLA   D S+LIC RCSGQFLEELHLTRPQ + SPE R+LEAL
Sbjct: 9   TRPSFHLYWCHQCHRMVTLATAGDPSELICSRCSGQFLEELHLTRPQFDNSPETRLLEAL 68

Query: 76  SLMLQPPVRLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNS 135
           SLML PPVRLFR PD +R  P+  +FD+FDRRSFSDPEGDEWF  R RRR RSLDER+NS
Sbjct: 69  SLMLDPPVRLFRLPDLDRRRPMSHQFDNFDRRSFSDPEGDEWFHGRTRRRNRSLDERDNS 128

Query: 136 GLQPPNPNRSTTVIFLRPADPSRP---IIPPRGDPRDYFTGPRLDELIEELTQNDRPGPP 195
            L PPN NRS T I LRP DPSRP   IIPPR DP DYFTGPRLDELIEELTQNDRPGP 
Sbjct: 129 SLLPPNQNRSRTFIILRPTDPSRPVQTIIPPRADPGDYFTGPRLDELIEELTQNDRPGPQ 188

Query: 196 PATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLH 255
           PA+E AIE IPTV I AEHLKNDS CPVCKEEF +G EAREL CKH+YHSECIVPWLRLH
Sbjct: 189 PASEAAIERIPTVKIAAEHLKNDSMCPVCKEEFEIGEEARELMCKHVYHSECIVPWLRLH 248

Query: 256 NSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQDR 315
           NSCPVCRQEMPPSP P+N    S S+DEEG+GRRC RW+GQLV RPFR+RYRQLSPPQDR
Sbjct: 249 NSCPVCRQEMPPSP-PENQAAES-SEDEEGIGRRCTRWWGQLVNRPFRSRYRQLSPPQDR 308

[Close]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL
Match: A0A6J1IKH7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111476446 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.9e-120
Identity = 227/323 (70.28%), Postives = 255/323 (78.95%), Query Frame = 0


Query: 1   MSLSPPSHTTTTNPPTATTFHLYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRP 60
           M+LSPP H TT +   A TFHLY+C+QC R VTLA  + S L CPRC G F+EE+HL  P
Sbjct: 1   MALSPPPH-TTNDRRHARTFHLYWCHQCHRTVTLASAEPSDLTCPRCFGHFVEEVHLPLP 60

Query: 61  QLEPSPEDRVLEALSLMLQPPVRLF--RFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFP 120
           +L+PSPE R+LEALSLML PPVRLF  R PDP+R  P   RFDDFDRRSFSDPEGDEW  
Sbjct: 61  ELDPSPETRLLEALSLMLDPPVRLFNYRHPDPDRRRPPLHRFDDFDRRSFSDPEGDEWLH 120

Query: 121 WRARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPAD---PSRPIIPPRGDPRDYFTGPRL 180
           WR RRR+RSLDER+NSG QPPNPN+S TVI L P D   P +PIIP R +PRDYFTGPRL
Sbjct: 121 WRTRRRSRSLDERDNSGRQPPNPNQSRTVIVLGPPDQFQPIQPIIPRRANPRDYFTGPRL 180

Query: 181 DELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRC 240
           DELIE+LTQNDRPGPPPA E AIE IPTV I AEHLKNDS CPVCKEEF VGGEAREL C
Sbjct: 181 DELIEDLTQNDRPGPPPAGEEAIERIPTVKIAAEHLKNDSHCPVCKEEFEVGGEARELSC 240

Query: 241 KHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSG-SDDEEGMGRRCARWFGQLV 300
           KHIYHSECIVPWLRLHNSCPVCRQE+PP P P+N  G +G S+ E  +GR C RW+ +LV
Sbjct: 241 KHIYHSECIVPWLRLHNSCPVCRQEIPPLP-PEN--GAAGNSETEVRIGRACTRWWNRLV 300

Query: 301 PRPFRNRYRQLSP--PQDRYNSS 316
              FRNRYRQ+SP  P +R+N+S
Sbjct: 301 SWLFRNRYRQISPSSPPNRFNAS 319

[Close]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL
Match: A0A6J1FAA6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111443524 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.3e-118
Identity = 223/323 (69.04%), Postives = 253/323 (78.33%), Query Frame = 0


Query: 1   MSLSPPSHTTTTNPPTATTFHLYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRP 60
           M+LSPP   TT +   A TFHLY+C+QC R VTLA  + S L CPRC G F+EE+HL  P
Sbjct: 1   MALSPPPR-TTNDRRHARTFHLYWCHQCHRTVTLASAEPSDLTCPRCFGHFVEEVHLPLP 60

Query: 61  QLEPSPEDRVLEALSLMLQPPVRLF--RFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFP 120
           +L+PSPE R+LEALSLML PPVRLF  R PDP+R  P   RFDDFDRRSFSDPEGDEW  
Sbjct: 61  ELDPSPETRLLEALSLMLDPPVRLFNYRHPDPDRRRPPLHRFDDFDRRSFSDPEGDEWLH 120

Query: 121 WRARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPAD---PSRPIIPPRGDPRDYFTGPRL 180
           WR RRR+RSLDER+NSG QPPNPN+S TVI L P D   P +PIIP R +PRDYFTGPRL
Sbjct: 121 WRTRRRSRSLDERDNSGRQPPNPNQSRTVIVLGPPDQFQPIQPIIPRRANPRDYFTGPRL 180

Query: 181 DELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRC 240
           DELIE+LTQNDRPGPPPA E AIE IPTV I AEHLKNDS CPVCKEEF VGGEAREL C
Sbjct: 181 DELIEDLTQNDRPGPPPAGEEAIERIPTVKIAAEHLKNDSQCPVCKEEFEVGGEARELSC 240

Query: 241 KHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSG-SDDEEGMGRRCARWFGQLV 300
           KH+YHSECIVPWLRLHNSCPVCRQE+PP P P+N  G +G S++   +GR C RW+ +L 
Sbjct: 241 KHLYHSECIVPWLRLHNSCPVCRQEIPPLP-PEN--GAAGNSENGVRIGRACTRWWNRLA 300

Query: 301 PRPFRNRYRQLSP--PQDRYNSS 316
              FRNRYRQ+SP  P +R+N+S
Sbjct: 301 SWLFRNRYRQISPSSPPNRFNAS 319

[Close]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL
Match: A0A1S4DVY7 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103487574 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.2e-116
Identity = 221/328 (67.38%), Postives = 252/328 (76.83%), Query Frame = 0


Query: 1   MSLSPPSHTTTTNPPTATTFHLYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRP 60
           MSL+PP   +TTN    TTF LY+C+QC R +TLA    S+LICPRC GQF+EE+ LT P
Sbjct: 1   MSLTPPQ--STTNNRHTTTFQLYWCHQCHRTITLASAHTSELICPRCFGQFIEEIQLTLP 60

Query: 61  QLEPSPEDRVLEALSLMLQPPVRLF--RFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFP 120
           +  P PE R+ EALSLML  P+RLF  R P+ NR HP   RF++FDRRSFSDPEGDE   
Sbjct: 61  EFNPLPEARLFEALSLMLNQPIRLFNNRTPNGNRHHPPLHRFEEFDRRSFSDPEGDELPQ 120

Query: 121 WRARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPAD---PSRPIIPPRGDPRDYFTGPRL 180
           WR R R+RSLDER+N G QPPNPN+S TVI   P D   P +PI+P R  PRDYFTGP+L
Sbjct: 121 WRRRWRSRSLDERDNFGPQPPNPNQSRTVIVFGPPDQLQPIQPILPRRVSPRDYFTGPQL 180

Query: 181 DELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKNDSTCPVCKEEFVVGGEARELRC 240
           DELIEELTQNDRPGP PA+E AIE IP V I AEHLKNDS CPVCKEEF VGGEAREL C
Sbjct: 181 DELIEELTQNDRPGPAPASEEAIERIPMVKIAAEHLKNDSHCPVCKEEFEVGGEARELSC 240

Query: 241 KHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSGSDDEEGMGRRCARWFGQLVP 300
           KHIYHSECIVPWLRLHNSCPVCRQEM PS +P+N    S S +EEGMGRRCARW+ QLVP
Sbjct: 241 KHIYHSECIVPWLRLHNSCPVCRQEM-PSLTPENE--ASSSSEEEGMGRRCARWWSQLVP 300

Query: 301 RPFRNRYRQLSP-PQDRYNSSGDETQCR 323
            PFRNRYRQ+SP P++R+++S  E   R
Sbjct: 301 WPFRNRYRQISPFPRNRFDASSREINSR 323

[Close]

BLAST of Sed0007930.1 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-58
Identity = 149/334 (44.61%), Postives = 189/334 (56.59%), Query Frame = 0


Query: 1   MSLSPPSHTTTTNPPTA-TTFHLYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEEL---- 60
           MSLS P   T + P  A  TF LY+CY C R V +A  + S++ CPRC  QF+ E+    
Sbjct: 1   MSLSQPITRTDSAPNGAFRTFGLYWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQ 60

Query: 61  -------HLTRPQLEPSPEDRVLEALSLMLQPPVRLFRF-PDPNRIHPLPQRFDDFDRRS 120
                  H T P  + SPE R+LEALSLM + P  + RF  DP         F     R+
Sbjct: 61  RPRFTFNHAT-PPFDASPEARLLEALSLMFE-PATIGRFGADP---------FLRARSRN 120

Query: 121 FSDPEGDEWFPWRARRRTRSLDERNNSGLQPPNPNRSTTVIFLRPADPSRP----IIPPR 180
             +PE     P    RR  SLD  NN GL  P P R  T + LRP +P+ P    I PP 
Sbjct: 121 ILEPESR---PRPQHRRRHSLDNVNNGGL--PLPRR--TYVILRPNNPTSPLGNIIAPPN 180

Query: 181 GDP------RDYFTG-PRLDELIEELTQNDRPGPPPATEGAIEGIPTVTITAEHLKND-S 240
             P       DYFTG   L++LIE+LTQ+DRPGPPPA+E  I  +P+V IT +HL ND S
Sbjct: 181 QAPPRHVNSHDYFTGASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMS 240

Query: 241 TCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRLHNSCPVCRQEMPPSPSPQNPRGPSG 300
            C VC EEF+VGG+A EL CKHIYH +CIVPWLRL+NSCP+CR+++P   +    R  S 
Sbjct: 241 QCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVAESRERSN 300

Query: 301 SDDEEGMGRRCARWFGQLVPRPFRNRYRQLSPPQ 310
              ++   RR  RW       PFR RY+++SP +
Sbjct: 301 PIRQDMPERRRPRWMQLGNIWPFRARYQRVSPEE 316

[Close]

BLAST of Sed0007930.1 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-34
Identity = 112/326 (34.36%), Postives = 151/326 (46.32%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPV 82
           ++C++CQRAV L      + +C  C G F+EEL +     + SP D       ++     
Sbjct: 8   HWCHRCQRAVRLHG---QEPVCFYCGGGFVEELDMA----QASPFDMFRSHRGVV----- 67

Query: 83  RLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQP---- 142
                 + ++   L   F  F R   ++   D       R RT S    N  GL P    
Sbjct: 68  ------ERDQTFDLMDAFSVFMRNRLAERSHDR----EIRGRTISSGPENFPGLAPLLIF 127

Query: 143 --PNPNRST----TVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQ-NDRPGPP 202
               P R T             P   I   RG+  DYF GP L+EL E+L+    R GPP
Sbjct: 128 GGQVPYRLTGDNAVEALFNGGSPGIGI--TRGNTGDYFFGPGLEELFEQLSAGTTRRGPP 187

Query: 203 PATEGAIEGIPTVTITAEHLK-NDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRL 262
           PA   AI+ +PT+ I   HL+ +DS CPVCK+EF +G EA+++ C HIYHS+CIVPWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 263 HNSCPVCRQEMPPSPSP---QNPRGP-----------SGSDDEEGMGRR---CARWFGQL 320
           HNSCPVCRQE+P +  P   QN   P           S +  E G  RR    + W    
Sbjct: 248 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFW---- 302

[Close]

BLAST of Sed0007930.1 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-34
Identity = 112/326 (34.36%), Postives = 151/326 (46.32%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPV 82
           ++C++CQRAV L      + +C  C G F+EEL +     + SP D       ++     
Sbjct: 8   HWCHRCQRAVRLHG---QEPVCFYCGGGFVEELDMA----QASPFDMFRSHRGVV----- 67

Query: 83  RLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQP---- 142
                 + ++   L   F  F R   ++   D       R RT S    N  GL P    
Sbjct: 68  ------ERDQTFDLMDAFSVFMRNRLAERSHDR----EIRGRTISSGPENFPGLAPLLIF 127

Query: 143 --PNPNRST----TVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQ-NDRPGPP 202
               P R T             P   I   RG+  DYF GP L+EL E+L+    R GPP
Sbjct: 128 GGQVPYRLTGDNAVEALFNGGSPGIGI--TRGNTGDYFFGPGLEELFEQLSAGTTRRGPP 187

Query: 203 PATEGAIEGIPTVTITAEHLK-NDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRL 262
           PA   AI+ +PT+ I   HL+ +DS CPVCK+EF +G EA+++ C HIYHS+CIVPWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 263 HNSCPVCRQEMPPSPSP---QNPRGP-----------SGSDDEEGMGRR---CARWFGQL 320
           HNSCPVCRQE+P +  P   QN   P           S +  E G  RR    + W    
Sbjct: 248 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFW---- 302

[Close]

BLAST of Sed0007930.1 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 143.3 bits (360), Expect = 3.5e-34
Identity = 112/326 (34.36%), Postives = 151/326 (46.32%), Query Frame = 0


Query: 23  YYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPPV 82
           ++C++CQRAV L      + +C  C G F+EEL +     + SP D       ++     
Sbjct: 8   HWCHRCQRAVRLHG---QEPVCFYCGGGFVEELDMA----QASPFDMFRSHRGVV----- 67

Query: 83  RLFRFPDPNRIHPLPQRFDDFDRRSFSDPEGDEWFPWRARRRTRSLDERNNSGLQP---- 142
                 + ++   L   F  F R   ++   D       R RT S    N  GL P    
Sbjct: 68  ------ERDQTFDLMDAFSVFMRNRLAERSHDR----EIRGRTISSGPENFPGLAPLLIF 127

Query: 143 --PNPNRST----TVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEELTQ-NDRPGPP 202
               P R T             P   I   RG+  DYF GP L+EL E+L+    R GPP
Sbjct: 128 GGQVPYRLTGDNAVEALFNGGSPGIGI--TRGNTGDYFFGPGLEELFEQLSAGTTRRGPP 187

Query: 203 PATEGAIEGIPTVTITAEHLK-NDSTCPVCKEEFVVGGEARELRCKHIYHSECIVPWLRL 262
           PA   AI+ +PT+ I   HL+ +DS CPVCK+EF +G EA+++ C HIYHS+CIVPWL  
Sbjct: 188 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 247

Query: 263 HNSCPVCRQEMPPSPSP---QNPRGP-----------SGSDDEEGMGRR---CARWFGQL 320
           HNSCPVCRQE+P +  P   QN   P           S +  E G  RR    + W    
Sbjct: 248 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFW---- 302

[Close]

BLAST of Sed0007930.1 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-33
Identity = 100/306 (32.68%), Postives = 157/306 (51.31%), Query Frame = 0


Query: 22  LYYCYQCQRAVTLAPPDLSQLICPRCSGQFLEELHLTRPQLEPSPEDRVLEALSLMLQPP 81
           +++CYQC + VT++    +   CP C+  FLEE        +P+P     ++L+      
Sbjct: 20  MFFCYQCNQTVTISISSSADPFCPICNQGFLEEYE------DPNPN----QSLNFNPNSS 79

Query: 82  VRLFRFPDP-NRIHPL--------PQRFDDFD----------RRSFSDPEGDEWFPWRAR 141
              F   DP + + PL        P   D             R +  +P+ D + P+   
Sbjct: 80  DSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFL 139

Query: 142 RRTRSLDERNNSGLQPPNPNRSTTVIFLRPADPSRPIIPPRGDPRDYFTGPRLDELIEEL 201
           +    L    +SG           VI   P+DP   +    G+  DYF GP L++LI++L
Sbjct: 140 Q--NHLQTLRSSG------THFEFVIENHPSDPGNRM---PGNFGDYFFGPGLEQLIQQL 199

Query: 202 TQND--RPGPPPATEGAIEGIPTVTITAEHLKND-STCPVCKEEFVVGGEARELRCKHIY 261
            +ND  R G PPA++ AI+ +PTV +T + LK++ + C VC +EF  G + +++ CKH++
Sbjct: 200 AENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVF 259

Query: 262 HSECIVPWLRLHNSCPVCRQEMP-PSPSPQN-PRGPSGSDDEEGM--GRRCARWFGQLVP 302
           H +C++PWL LHNSCPVCR E+P   P  +N  +G  GS D +G   G++  R+  QL P
Sbjct: 260 HQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQL-P 303

The following BLAST results are available for this feature:

BLAST of Sed0007930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941465.1	4.1e-130	76.64	E3 ubiquitin-protein ligase RZF1-like [Cucurbita moschata]	[more]
XP_023525796.1	6.0e-129	75.74	E3 ubiquitin-protein ligase RZF1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981032.1	6.6e-128	76.32	E3 ubiquitin-protein ligase RZF1-like [Cucurbita maxima]	[more]
KAG7031679.1	1.2e-126	72.50	E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6608050.1	1.6e-121	76.29	E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Sed0007930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	4.9e-33	34.36	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
P0CH30	4.9e-33	33.77	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	3.2e-32	32.68	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q94AK4	5.4e-32	36.03	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q91YL2	2.0e-26	32.30	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]

BLAST of Sed0007930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTR5	2.0e-130	76.64	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446755...	[more]
A0A6J1ISV3	3.2e-128	76.32	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111480302 P...	[more]
A0A6J1IKH7	1.9e-120	70.28	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111476446 P...	[more]
A0A6J1FAA6	2.3e-118	69.04	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111443524...	[more]
A0A1S4DVY7	2.2e-116	67.38	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103487574 PE=4 ...	[more]

BLAST of Sed0007930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	1.5e-58	44.61	RING/U-box superfamily protein	[more]
AT2G40830.2	3.5e-34	34.36	RING-H2 finger C1A	[more]
AT2G40830.1	3.5e-34	34.36	RING-H2 finger C1A	[more]
AT2G40830.3	3.5e-34	34.36	RING-H2 finger C1A	[more]
AT3G19950.1	2.3e-33	32.68	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 217..257 e-value: 2.0E-6 score: 37.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 216..258 e-value: 3.9E-11 score: 43.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 217..258 score: 11.943417
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 22..55 e-value: 1.6E-12 score: 47.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 180..264 e-value: 1.3E-21 score: 78.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..325
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 17..279
None	No IPR available	PANTHER	PTHR15710:SF29	SUBFAMILY NOT NAMED	coord: 17..279
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 216..258 e-value: 1.81861E-21 score: 83.5212
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 197..269

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0007930	Sed0007930	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007930.1-cds	Sed0007930.1-cds-LG05:36092316..36092344	CDS
Sed0007930.1-cds	Sed0007930.1-cds-LG05:36093640..36094588	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0007930.1-exon	Sed0007930.1-exon-LG05:36092316..36092344	exon
Sed0007930.1-exon	Sed0007930.1-exon-LG05:36093640..36094588	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0007930.1	Sed0007930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity