Sed0006767.1 (mRNA) Chayote v1

Overview


Name	Sed0006767.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	NDR1/HIN1-like protein 3
Location	LG12: 10632532 .. 10633029 (-)
Sequence length	498
RNA-Seq Expression	Sed0006767.1
Synteny	Sed0006767.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCTCTTCACCATGACCCACAAGGTCAAGTTCCATGTGATCGATGCCGACCTGACCCAATTCAACTTCATCGATGACAACCAACGCCTCCTCTTTGACCTCAATGTCAACATGACCGTCAAAAACCCTAATCGTGCCTTTGGAGTTTTTTTCGACGTTATTGAAGTGGCCGTGTTGTATCAAGACATAAGGTTTAGCAACGTGTCGTTATCGCCATTCTACCAAGACCGTGATGGCTCGAGGCTACTCAAACTTAAGTTCGATGGTCAGCAATTAATGAACCTCGACGAGGAGCAACTTGCTTTGTTGGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGCAGCTTCGTCTTCAAATGAGGGTCAATATCGGCATCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGGTTAAATGTGCCCTTGATTTCTCGTGGAAGATCGTTTCTTCAATTTCAGATTGTTGGTTGCTATGTCGTTTATTGA

mRNA sequence

ATGTGGCTCTTCACCATGACCCACAAGGTCAAGTTCCATGTGATCGATGCCGACCTGACCCAATTCAACTTCATCGATGACAACCAACGCCTCCTCTTTGACCTCAATGTCAACATGACCGTCAAAAACCCTAATCGTGCCTTTGGAGTTTTTTTCGACGTTATTGAAGTGGCCGTGTTGTATCAAGACATAAGGTTTAGCAACGTGTCGTTATCGCCATTCTACCAAGACCGTGATGGCTCGAGGCTACTCAAACTTAAGTTCGATGGTCAGCAATTAATGAACCTCGACGAGGAGCAACTTGCTTTGTTGGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGCAGCTTCGTCTTCAAATGAGGGTCAATATCGGCATCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGGTTAAATGTGCCCTTGATTTCTCGTGGAAGATCGTTTCTTCAATTTCAGATTGTTGGTTGCTATGTCGTTTATTGA

Coding sequence (CDS)

ATGTGGCTCTTCACCATGACCCACAAGGTCAAGTTCCATGTGATCGATGCCGACCTGACCCAATTCAACTTCATCGATGACAACCAACGCCTCCTCTTTGACCTCAATGTCAACATGACCGTCAAAAACCCTAATCGTGCCTTTGGAGTTTTTTTCGACGTTATTGAAGTGGCCGTGTTGTATCAAGACATAAGGTTTAGCAACGTGTCGTTATCGCCATTCTACCAAGACCGTGATGGCTCGAGGCTACTCAAACTTAAGTTCGATGGTCAGCAATTAATGAACCTCGACGAGGAGCAACTTGCTTTGTTGGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGCAGCTTCGTCTTCAAATGAGGGTCAATATCGGCATCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGGTTAAATGTGCCCTTGATTTCTCGTGGAAGATCGTTTCTTCAATTTCAGATTGTTGGTTGCTATGTCGTTTATTGA

Protein sequence

MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY

Homology

[Close]

BLAST of Sed0006767.1 vs. NCBI nr
Match: XP_022957840.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 131/165 (79.39%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TM +K+KFHVIDADLTQFNF DD Q LLFDL VNM VKNPNRAFGVFFD IEV VL
Sbjct: 26  VWLITMANKIKFHVIDADLTQFNFTDDKQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTVL 85

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN SLSPFYQ +DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV+ FTLKL+LR
Sbjct: 86  YQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELR 145

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           LQ+RVNI +IKIKLKPKVRCGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 146 LQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 189

[Close]

BLAST of Sed0006767.1 vs. NCBI nr
Match: XP_023005830.1 (NDR1/HIN1-like protein 3 [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TM +K+KFHVI ADLTQFNF DDNQ LLFDL VNM VKNPNRAFGVFFD IEV +L
Sbjct: 26  VWLITMANKIKFHVIGADLTQFNFTDDNQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTLL 85

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN S+SPFYQ +DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV++FTLKL+LR
Sbjct: 86  YQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELR 145

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           LQ+RVNI +IKIKLKPKV CGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 146 LQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY 189

[Close]

BLAST of Sed0006767.1 vs. NCBI nr
Match: KAG6596607.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.4 bits (651), Expect = 3.4e-64
Identity = 129/160 (80.62%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 6   MTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDIR 65
           M +K+KFHVIDADLTQFNF DD Q LLFDL VNM VKNPNRAFGVFFD IEV VLYQDI+
Sbjct: 1   MANKIKFHVIDADLTQFNFTDDKQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIK 60

Query: 66  FSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMRV 125
           FSN SLSPFYQD+DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV+ FTLKL+LRLQ+RV
Sbjct: 61  FSNASLSPFYQDQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELRLQIRV 120

Query: 126 NIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           NI +IKIKLKPKVRCGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 121 NIDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 159

[Close]

BLAST of Sed0006767.1 vs. NCBI nr
Match: KAG7028146.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.4 bits (633), Expect = 4.2e-62
Identity = 127/165 (76.97%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TM +K+KFHVIDADLTQFNF DD Q LLFDL VNM VKNPNRAFGVFFD IEV VL
Sbjct: 26  VWLITMANKIKFHVIDADLTQFNFTDDKQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTVL 85

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN SLSPFYQD+DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV+ FTLKL+L 
Sbjct: 86  YQDIKFSNASLSPFYQDQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLEL- 145

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
               +NI +IKIKLKPKVRCGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 146 ----LNIDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 184

[Close]

BLAST of Sed0006767.1 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 7.4e-59
Identity = 117/165 (70.91%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL T THK+KF V +A+LTQFNF DD+Q LLF L++NMTVKNPNR FGVFFD IEV VL
Sbjct: 25  LWLITKTHKLKFQVTNANLTQFNFTDDSQ-LLFQLSLNMTVKNPNRGFGVFFDSIEVVVL 84

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSNVSLSPFYQ ++G  LL L FDGQQLMNLD +QLA+  LEKL+D+F++KL+LR
Sbjct: 85  YQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQLMNLDAQQLAVFTLEKLLDIFSIKLELR 144

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           L+MRV IG I+IKL PKVRCGLN+PLIS GRSF++F+I+ CYV Y
Sbjct: 145 LRMRVKIGFIRIKLNPKVRCGLNLPLISHGRSFIRFRIIDCYVAY 188

[Close]

BLAST of Sed0006767.1 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL    + +KFHV DA LT+F  +D    L ++L++N T++NPNR  GV++D IEV   
Sbjct: 66  IWLIFRPNAIKFHVTDAKLTEFT-LDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGY 125

Query: 61  YQDIRFS-NVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQL 120
           Y D RF  + ++S FYQ    + ++  K  GQQL+ LD  +   L  +    ++ +  +L
Sbjct: 126 YGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKL 185

Query: 121 RLQMRVNIGIIKI-KLKPKVRCGLNVPLISRGRSFLQFQIVGCYV 164
           RL++R   G+IK  + KPK++C L VPL S   S   FQ   C V
Sbjct: 186 RLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDV 229

[Close]

BLAST of Sed0006767.1 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 52/147 (35.37%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 2   WLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLY 61
           WL      +KFHV DA LT+F+    +  L ++L + + V+NPN+  G+++D IE    Y
Sbjct: 60  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 119

Query: 62  QDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRL 121
           +  RFS ++L+PFYQ    + +L   F GQ L+  +  Q   L  E++  V+ ++++ RL
Sbjct: 120 EGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRL 179

Query: 122 QMRVNIGIIKI-KLKPKVRC-GLNVPL 147
           ++R  +G +K  ++KPKV C  L +PL
Sbjct: 180 RVRFKLGDLKFRRIKPKVDCDDLRLPL 206

[Close]

BLAST of Sed0006767.1 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.8e-19
Identity = 58/164 (35.37%), Postives = 93/164 (56.71%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL    + VKF+V DA+L +F+F D N  L + L++N T++NPN+  GV++D   V+  
Sbjct: 73  LWLIFRPNAVKFYVADANLNRFSF-DPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGY 132

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           Y D RF + ++S FYQ    + ++  K +GQ L+ L +     L  ++   ++ +  +LR
Sbjct: 133 YGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLR 192

Query: 121 LQMRVNIGIIKI-KLKPKVRC-GLNVPL-ISRGRSFLQFQIVGC 162
           L +R     IK  KLKPK++C  L +PL  S      +FQ V C
Sbjct: 193 LSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

[Close]

BLAST of Sed0006767.1 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 42/141 (29.79%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 7   THKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDIRF 66
           ++ VKF V DA+LT F+ ++ N  L + L++N++++N   + G+ +D  E  V Y + R 
Sbjct: 4   SNDVKFQVYDAELTHFD-LESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 67  SNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMRVN 126
             V +  FY     + LL+  F+GQ L+ L   +      ++   V+ + ++L +  RV 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 127 I-GIIKIKLKPKVRCGLNVPL 147
           +  ++   +KP VRC L +PL
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPL 143

[Close]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL
Match: A0A6J1H1R7 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.8e-66
Identity = 131/165 (79.39%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TM +K+KFHVIDADLTQFNF DD Q LLFDL VNM VKNPNRAFGVFFD IEV VL
Sbjct: 26  VWLITMANKIKFHVIDADLTQFNFTDDKQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTVL 85

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN SLSPFYQ +DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV+ FTLKL+LR
Sbjct: 86  YQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELR 145

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           LQ+RVNI +IKIKLKPKVRCGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 146 LQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 189

[Close]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.7e-65
Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TM +K+KFHVI ADLTQFNF DDNQ LLFDL VNM VKNPNRAFGVFFD IEV +L
Sbjct: 26  VWLITMANKIKFHVIGADLTQFNFTDDNQ-LLFDLTVNMKVKNPNRAFGVFFDRIEVTLL 85

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN S+SPFYQ +DGS+LLKLKFDGQQLMNL+ EQLA+  LEKLV++FTLKL+LR
Sbjct: 86  YQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVEIFTLKLELR 145

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           LQ+RVNI +IKIKLKPKV CGLN+PLISRGR+FL+FQI+GC+V Y
Sbjct: 146 LQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRFQIIGCHVAY 189

[Close]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 111/165 (67.27%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL TMT K+KF V +A LT+FN  + +Q LLF L++NM V+NPNR FGVFFD IEVAVL
Sbjct: 25  LWLMTMTRKLKFQVNNAKLTKFNLTNGSQ-LLFQLSLNMMVQNPNRGFGVFFDSIEVAVL 84

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           YQDI+FSN+SLSPFYQ  +G  LL  +FDGQQLMNLD EQLA+  LEKLVD+F++K++LR
Sbjct: 85  YQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELR 144

Query: 121 LQMRVNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           L MRV IG I+IKL PKVRCGLN+PL+S GRSFL+F+I+GC+V Y
Sbjct: 145 LHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 188

[Close]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 109/161 (67.70%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 5   TMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDI 64
           TMT K+KF V +A LT+FN  + +Q LLF L++NM V+NPNR FGVFFD IEVAVLYQDI
Sbjct: 2   TMTRKLKFQVNNAKLTKFNLTNGSQ-LLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 61

Query: 65  RFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMR 124
           +FSN+SLSPFYQ  +G  LL  +FDGQQLMNLD EQLA+  LEKLVD+F++K++LRL MR
Sbjct: 62  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 121

Query: 125 VNIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
           V IG I+IKL PKVRCGLN+PL+S GRSFL+F+I+GC+V Y
Sbjct: 122 VKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 161

[Close]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL
Match: A0A1S3B7X9 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.5e-53
Identity = 108/160 (67.50%), Postives = 133/160 (83.12%), Query Frame = 0


Query: 6   MTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDIR 65
           MT K+KF V +A LT+FN  + +Q LLF L++NM V+NPNR FGVFFD IEVAVLYQDI+
Sbjct: 1   MTRKLKFQVNNAKLTKFNLTNGSQ-LLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDIK 60

Query: 66  FSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMRV 125
           FSN+SLSPFYQ  +G  LL  +FDGQQLMNLD EQLA+  LEKLVD+F++K++LRL MRV
Sbjct: 61  FSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMRV 120

Query: 126 NIGIIKIKLKPKVRCGLNVPLISRGRSFLQFQIVGCYVVY 166
            IG I+IKL PKVRCGLN+PL+S GRSFL+F+I+GC+V Y
Sbjct: 121 KIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 159

[Close]

BLAST of Sed0006767.1 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 104.4 bits (259), Expect = 9.1e-23
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL    + +KFHV DA LT+F  +D    L ++L++N T++NPNR  GV++D IEV   
Sbjct: 66  IWLIFRPNAIKFHVTDAKLTEFT-LDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGY 125

Query: 61  YQDIRFS-NVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQL 120
           Y D RF  + ++S FYQ    + ++  K  GQQL+ LD  +   L  +    ++ +  +L
Sbjct: 126 YGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKL 185

Query: 121 RLQMRVNIGIIKI-KLKPKVRCGLNVPLISRGRSFLQFQIVGCYV 164
           RL++R   G+IK  + KPK++C L VPL S   S   FQ   C V
Sbjct: 186 RLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDV 229

[Close]

BLAST of Sed0006767.1 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 52/147 (35.37%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 2   WLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLY 61
           WL      +KFHV DA LT+F+    +  L ++L + + V+NPN+  G+++D IE    Y
Sbjct: 60  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 119

Query: 62  QDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRL 121
           +  RFS ++L+PFYQ    + +L   F GQ L+  +  Q   L  E++  V+ ++++ RL
Sbjct: 120 EGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRL 179

Query: 122 QMRVNIGIIKI-KLKPKVRC-GLNVPL 147
           ++R  +G +K  ++KPKV C  L +PL
Sbjct: 180 RVRFKLGDLKFRRIKPKVDCDDLRLPL 206

[Close]

BLAST of Sed0006767.1 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-20
Identity = 58/164 (35.37%), Postives = 93/164 (56.71%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +WL    + VKF+V DA+L +F+F D N  L + L++N T++NPN+  GV++D   V+  
Sbjct: 73  LWLIFRPNAVKFYVADANLNRFSF-DPNNNLHYSLDLNFTIRNPNQRVGVYYDEFSVSGY 132

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           Y D RF + ++S FYQ    + ++  K +GQ L+ L +     L  ++   ++ +  +LR
Sbjct: 133 YGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLR 192

Query: 121 LQMRVNIGIIKI-KLKPKVRC-GLNVPL-ISRGRSFLQFQIVGC 162
           L +R     IK  KLKPK++C  L +PL  S      +FQ V C
Sbjct: 193 LSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

[Close]

BLAST of Sed0006767.1 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-17
Identity = 49/165 (29.70%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 1   MWLFTMTHKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVL 60
           +W     + VKF V +ADLT+F F   +  L +++++N +++NPN+  G+ +D +EV   
Sbjct: 72  LWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYDQLEVRGY 131

Query: 61  YQDIRFSNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLR 120
           Y D RFS  +++ FYQ    + ++  + +GQ+L+ L          ++   V+ + ++LR
Sbjct: 132 YGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGVYRIDVKLR 191

Query: 121 LQMRVNIGIIKI-KLKPKVRCGLNVPL-ISRGRSFLQFQIVGCYV 164
            ++R   G +    ++PK++C L VPL  S      QF    C+V
Sbjct: 192 FKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPTKCHV 236

[Close]

BLAST of Sed0006767.1 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-13
Identity = 42/141 (29.79%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 7   THKVKFHVIDADLTQFNFIDDNQRLLFDLNVNMTVKNPNRAFGVFFDVIEVAVLYQDIRF 66
           ++ VKF V DA+LT F+ ++ N  L + L++N++++N   + G+ +D  E  V Y + R 
Sbjct: 4   SNDVKFQVYDAELTHFD-LESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 67  SNVSLSPFYQDRDGSRLLKLKFDGQQLMNLDEEQLALLALEKLVDVFTLKLQLRLQMRVN 126
             V +  FY     + LL+  F+GQ L+ L   +      ++   V+ + ++L +  RV 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 127 I-GIIKIKLKPKVRCGLNVPL 147
           +  ++   +KP VRC L +PL
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPL 143

The following BLAST results are available for this feature:

BLAST of Sed0006767.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957840.1	1.8e-65	79.39	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
XP_023005830.1	1.2e-64	77.58	NDR1/HIN1-like protein 3 [Cucurbita maxima]	[more]
KAG6596607.1	3.4e-64	80.63	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028146.1	4.2e-62	76.97	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038904446.1	7.4e-59	70.91	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]

BLAST of Sed0006767.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNH6	1.3e-21	38.18	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	2.0e-19	35.37	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	7.8e-19	35.37	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	5.4e-12	29.79	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]

BLAST of Sed0006767.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1R7	8.8e-66	79.39	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1	[more]
A0A6J1KYH7	5.7e-65	77.58	NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1	[more]
A0A5D3DNY5	3.1e-55	67.27	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TKH6	1.7e-53	67.70	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3B7X9	6.5e-53	67.50	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1	[more]

BLAST of Sed0006767.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06320.1	9.1e-23	38.18	NDR1/HIN1-like 3	[more]
AT2G35980.1	1.5e-20	35.37	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	5.5e-20	35.37	NDR1/HIN1-like 2	[more]
AT2G35460.1	2.6e-17	29.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	3.8e-13	29.79	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 39..140 e-value: 1.3E-9 score: 38.5
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 2..161
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 2..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006767	Sed0006767	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006767.1-cds	Sed0006767.1-cds-LG12:10632532..10633029	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006767.1-exon	Sed0006767.1-exon-LG12:10632532..10633029	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006767.1	Sed0006767.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane