Sed0002157.1 (mRNA) Chayote v1

Overview


Name	Sed0002157.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG13: 7146220 .. 7152917 (-)
Sequence length	1145
RNA-Seq Expression	Sed0002157.1
Synteny	Sed0002157.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCCCTTCTCAAAACCTCTTCAAATCTCCAACCCATTTGAAGATTTGTTGCTTCACAAACCCCCTTCCCAGAACCAACCCTCCATTTTCTCTCCCCATTTCACCTCCACGCCTCTCAAATCCCCATCAATTCCACCTTCACAACTTACATTCCCCCAACAGTTCATCTTCCCGCCGGATTTATTGCCAATTCGGCGTCGGAATCTTCGAATCCGAAGACGAAAACGGCGGTGCCCATTTGAAATTGGACACGGTTCTTCTGTACTCTGAACTGGTTTCTCTGTTTTCTTCGGCTGCTTTGTGGGTTGTTTTTGTTGGGAGATTTGTGGGTTCGAATTCGAAGAAGGGGATTTGGGTATTGTTGGGAGATAGGGGTTTTGTGTGGGGGTTTCCTTTGCTTGTGGCTACGGTTGTTCTTAATTCGTGGATTCGAAGGCGGCAATGGAGTCGGGTTTGTGGGCAAACAGGGGGCGGTTCGTTGAAGGTGAATTTGTTGGATAGGGTTGAGAAATTGGAGGAGGATTTAAGGAGCTCCATGACTGTGATTCGGGCTTTGTCTAGGAAGCTTGAGAAGTTGGGGATAAGGTTTATGGTTACAAGAAAAACTGTGAAAGATCCAATTGCTGAGGTATTCTTACTTATCTCTTGTTACTCACAATATGTTTCTTTGATTGATAATAACTTGTCATAGGTAAGGTGAAGAGGGTTTAAGTAACTAAGAGTTGATTGGTTCTATCAGTGTTCAATCTATAGTTACCACTTACCTAGAAATTAATTTCGTAGGCATTGCTTAATATCTAAATGTTGTAGGGTCAAGCTGTATGTGATGTGAGAATAGTCGAGCTGCGTGTATGCTGGCTCGAACACTCACGGGTTTAAGTAACTAAGAGTTGATTGGTTTTATCAGTGTTCAATCTATAGTTACCACTTACCTAGAAATTAATTTCGGAGGCATTTGCATATCTAAATGTTGTAGGGTCAAGTTGTATGTCGTGTGAGAATAGACGAGCTGCGTGTATGCTGGCTCAAACACTCACGAGTAGCAAAAACAAAAAACTTGTCATAGGTGAGATTGAGAGGATATTCGTAAATTAGAATTGAATTGCCTAACCTGTTTAATCCTGTCATTTTGAAGAGAATGTATTAAGGTTTGCTCTTTATCGAATGTTTGAAACTGAAAAGCTTTCAGCATTTACATAGTCGTGCTGAATTTCTGTTGGAAAATTCAAGCAGTGTGTGTGTGTGTGTTTTTTATAAGAAACAATTTCATTAATATATGGAATTAGAAAGAGGAGAAAAACCCCATGAGATACCACTCCAATTAGAGAGGAGGGCTGATGGCAGTATAGTTGCAACAACAAGCAATGTGAGTTAACTGTATCAAGGATGAGAAGTGGAGAGCTCATCAGCTCATTGTTGAAAATTAAACATGTTCTAATTCTACATTTACATGAACAAATATTTGATCAAGTGTTTTTTGTAATATAGTTTTTAAAGATGAATTAATTGGTGGTACATTTATATGGATTCTGTGAGAGTACTTGAGGGATATATTGAGAATATTAGTAGGTAATTAGTAAGGGTAGGATACTGATTAGTAAAAAATGATTTGACTCCATGGTGCCACCAACCTAGAAATGAATTATTATTTTTTTATAAGTTACTTTTTTAAGAGGAATTTTCTACGAGTTACCTTGACAATCAAATGTAGTAGGGTTGAATCGTTATCTTGTGAGAAAAGTCGCTATAGATTGGAAGTTAGGGTTCTTAGAAAGGAGGTATCATTTAGTGGGATTGTCCATTGTGGGACTTGGAGAGAGTTAACCCTCCCAAAAGGTTGCTATATTGTAGTTCCAAGCAGATTCATAGCATGGTCTAGATTTTTCAGGTCTCTAGTATGTTTAAAACTAGTGTGCAGAGAAGAAAAGAAAGAAACTTTGAGCGAAAGCGGTGCATCTATAATTTAGATATAGTGACTGTTTTTTCTCAATCAAGTCTTATTTGATAACTTCTTATGGGTGGCCCTCACGTGCTTCCAACACTCCTGTCTAACTTCAATAAAAATTTGAGAGGATGCTTAGTTTTTCATTTGGCTATGTGCTTTTGTGTGTGTATCCATTTTCTTTAGGGGATTAATGTAGAAAATAATTTGAAATATGGTCACTTTTTACAAAAATTTAGCAATTATAGTCATTGGTATTAATAATAGTTTCTTATAATATTGTATTGATGAGTATTTATAATACAATATTAATGATTATAGATGCAGATACTTTAAAATTTGCCTTCGTAATTATTTTGTGAGAAGAGCACATCCCGTAAAATTGCCTTTTTCTTTAATAATGAGTGTGAAATCTGACTTTTAATCAACTCTATTCAACAAACCTCTAGTTATTTGTATGCTATTAAAGACTGCAGCTTTAGCTCAAAGAAATTCTGAGGACACTCGAACTTTGGCCGTGCAAGAAGACATTCTTGAAAAAGAACTCCTTGAAATGCAAAAGGTCTTACTAGCCATGCAGGTAAAAGTTAAAATGATTATTAAAACCAATGAACAAAAAAACTCTGTAGTTATTTTCAATTCAATTCCCCTTATATGCTGTATTTTTTATGGAGGTATTAGAGACGATGAGGGTGCCTAGACTTCAATGTGTTTTTATATACTGATTTATTCTGATACAGCCTATAAGTTATTGATAGATATATGTTGGAAGTACAAAAAAAGTAGTAGTCTCACATTCGCTAGATAAGAGGTTTTGTTTTTGGATAAGATATGATAACTTTCCGTTGAATTGTGTTAAACCACAATCAATCCAAAAACCTAAGTCGATGGATTATGGTAAATTTAATTATCTCAACCAAAACTCCCCCCACTTGTGAACTTTTGAAATTTGAGAAATGCCCTACAAGTGGAATTTCATTTTAATTGGGGAGAAAACGACTTGGCAAGGATTCAATCTCTTGACCTCTTGCTCTGATACCATGTTGAATTATGTTAAACCACCAATCAATCGAAAAGCCAAAGCTGATGAATTTAATTATATCCACCAACACTTTCATTGATAGATGAAAAGTTATAGAAAGGACGAAAGAAAACAATAGGTCCAATTAGTTACATAAAATCTTAAATGTGCATATAAAGTAGTTAAGCTATAATCGCTAGATAAGAGGTACATCACGAGTATACAAGTTAGGACAACCATCTGCTAATATTTTCTGGGTAAAGCCATATCCAAAGTGAGCAATATCATTCCAATGTGGAAACTTGTCAAAGGTAGATCTAGATTGTTGTCCTAAGTTCCTAACAATATGCTCTTATGATAATTTTTTATTTTTTATGATTCTGAAGTTAGTCTTTCATGAAAAGCAGGTTGATTTGTTAAGAGTTCATTTTTTGGTGTGTCGATTATGCACTATCTTTCTAAAAACGAGGTTTGAGGATACAATTTGCTTAAAGCTGATTGGATTTTCTTCAATGGATTCTGCAGGAGCAGCAGCAAAAGCAACTTGACCTGATTATTGCAATAGGAGAAAAAAAGAAGCTGATGAAAAGAAAACAGCCACTTGATCAAGAACCAACAATCATTGAAAGACACAATTCTGCCATTGAGGAGTCAAAAGAACTGGAAGCTTATGGAATCTGAGTTAAGATCCTCATCAAACTTTCCCATTCATCATCACTGTTTTTTTGTTGTTATCTGAAGTGAAAACTTGACCCCTAAATTTATAATGAAAAAATAACAAATTAACTAATAGAAAGGCAAGGAGCGTCCAAAATTTATCAGGTCTATGATTTTACTAATCCATAATTTATAGCTTTTCTTTTAGTTTTACTCAAAATGCTTCAAACCAACAGGGGCACTTGACCTCACTTATATGTTATGATCTCTTTTTTTCCTTGCCAATAACATAACATGATATGCTACCACTTAGAGCATTAATCACACCACACTAGTATGATAATTGTTTGTTAGAGGACTGATACCATTATCCTTGTTCGTTCGATGAAACTCGAAACAATTAACAAATAACACTAACAAATAAGAAATTCTCAAGGCGTTATCGATAGTTCTTCGATAAGCCAAGGTTGGGAGGTTCCTTTTTATGAGTAGTGTTTGAGCAGATATGTAGCCTGTCTGAAATTTAAAACTGGAGTGAATGTGCAAAAATGTATTAGTGGAATTCGCTTTTTTTTAAAACTCGAGATGCCTGGAAGCTCACCCAGAAATTCATGAATATTAAAAAAAAAAAAAATCATAATCATAGGTTTGAGTTACTCCACCCCAGATGTTAAACTAAAAAATATAAGGGTTAAATATCATTTTGGTTCATAAATTATGGAGTTTGTTTCATTTTTTGTCCTTCAATGTTCAAATATTCAAATTTAGTTCTTATATTAGAAAATTTGTTCCATTTTAATTCTAGGGTGCGTTTGGAGCACCGATTTAAATATGATAGATGGAAGGTTATAATAAATAGGGGATTATGATAAACGGTGAGTTATTGTAAATGGTGTTTGAGGGGCAAGTAATTACAATAGGGATTATGATAAACGGTGTTTGAGAGGCTGATTATGTAACAAAAAGTAATATATGTAAAGTTTAGATAAATGGGCACGCAGGTTTAGATAACCACCGTTTATTATAAACGATAGAGCAAACATTAGTTGAGTTATTATAACCAACTCGATCGTTTACATAAATAGGGGCCCAAACACAATGTCAAATGTCCCTTAACTTTCATAAAAGTTCAAAAATGGTCGCTAACCAACTTCAAACCGAATAGAAAATCATATTTTTCTCTCTCCTAAATCTATCTCTTTTTCTCTTCTCTCCTGCTTTGAACTCATTTTTGCACCAATAACCCCTCCATCAATCTACAAAAACAAGTTTATAAATTTTAATTTGAACCTTCAAAAAGTCAATATCTATACTTTCTTGCTTTGGTTCAAATTTTAGTTGAGTTTCAAAACATTGAAAAACTGGAACATACTCCTTAAACTAAATACTCTTTAGATTCTAAAATTTGTTATGAAAAGACTTCCATAGTGATTAATGATTAGAAAATTTTAAAAAAACTTTAAGACAAGAAAAGAATTTGGAGGTAAACACACATCAAGAAGGCAACATCTTATGCTCTTCTATATGAATGAAATCTCAAAAAGAAGTTCAAAGCCACTGTTAATTTCAATGTAAACTCAAAGCTTGGTAGCTCTATCAATTAATGTCAAATTCTCGTTCTTGTGATTTTATGAATAAATTAAGATGGATGGAATTTTGAAATCTATTAGAAGAGTAATTGAGATTTAATGAACCAAAACGAGATGGGTGAGAAAGAAAGAAAGAGGAGAGAGAAATATCGATTTAGAGAACAAATTCTATTATCCTTACTTTTATTATAACAATTTTAAAAAAAAAAATCATACATAGTATTAAGATATGTCTTGAACTGTTTAATGTCTTATGATTACTTAGTCGAAGGTCTCCCTGCCTGATCAGCAAGCATTCTATTTTCGTTTATGAGCTTTTATGTAATTGAATCTTAATTGTAAAAGGGTTTAACAAGAGTGTACTATATAAACCCCGAATCAAACCCTAGCCCACATTATTGATATTCTGTATTTTCACCATCTTCTTAATAAAAACGTTCTCTCTTCTATTCGTGGATGTAGCTAACACACACTTTTAGTGAACCATGTAAATTTTGTGTTCTTCTCTTTTACTTTTTCTTCTATTTTTTATTGATCGTTGATTGCCGTTTTCATAACACATAAGATTGAAGCTTATGCCTATCGATTTTACTTGAGTGGTATCTATTAATTTTGTGGCTATCAATTTAGCATGATTGAATGAGTTTTTGTTATATTTGAACTTTTTGGGAAAATTGCATAACTTAAGTTATGAGGTTTGAAACAATTATACTCTTAAATCATTAATTTGATCGATTACACCCGTTAAAATTTGCTAAGTATTACAATCTACTTTCAAAATTAAATTTGAATATTGTAATGAAGGGTGTAATTGTCATATCCAAAAAATTATTCATTTTCTTCAACTTACCTTATCTCTTTCTTCCTCTAAAATGAAAATTAATAAAATATAAAATATAACCATTTCTTTTTCTTTTCCTACCCTCAATGTTATATCAAGAGTATCTAAAATAGAATTATATTCTGAAATCTAGACTTTTCAAAAGTATTCTGTTGAGATTGAACCACAAAAAATGGTTCTTTTTGTAATCGAATATTATAAATGCAAATAAGTGTATATTATTTCTTAAACGCCTGGTGAGCTTAAAATTTTGTGTGAGCACACCCAAATCGTAAGTAAATTATTCATAAAAGATGACGAACTTACTAATTTGTCATTATTATTCTTGAAATCCCCATGTTTTGTTCATTATCTTAAAAAGTACCTGTAATTATGCAAATATACATATTTTTTTGTAGGGAAGATGATAGTTTTATTTGATAGATCCAGAATTCCCAGAAGTTATTTCCACATTTTGATTGGGAAGATGAAAGCAGGGTGGATACTCATACAATTTTAGATATTTTGTGGTTCAATTTCAAGAGAATGTTACTTTGAAGGTTTAGATTTGAGAATACCATTTTAGATCCTCTTGAGATAATGTTGATTGAAGAAGAAATGAAAAAGGAGTATATTTTATGTTTTATTAATTTTCAGGTTAGGG

mRNA sequence

ATGTCATTCCCTTCTCAAAACCTCTTCAAATCTCCAACCCATTTGAAGATTTGTTGCTTCACAAACCCCCTTCCCAGAACCAACCCTCCATTTTCTCTCCCCATTTCACCTCCACGCCTCTCAAATCCCCATCAATTCCACCTTCACAACTTACATTCCCCCAACAGTTCATCTTCCCGCCGGATTTATTGCCAATTCGGCGTCGGAATCTTCGAATCCGAAGACGAAAACGGCGGTGCCCATTTGAAATTGGACACGGTTCTTCTGTACTCTGAACTGGTTTCTCTGTTTTCTTCGGCTGCTTTGTGGGTTGTTTTTGTTGGGAGATTTGTGGGTTCGAATTCGAAGAAGGGGATTTGGGTATTGTTGGGAGATAGGGGTTTTGTGTGGGGGTTTCCTTTGCTTGTGGCTACGGTTGTTCTTAATTCGTGGATTCGAAGGCGGCAATGGAGTCGGGTTTGTGGGCAAACAGGGGGCGGTTCGTTGAAGGTGAATTTGTTGGATAGGGTTGAGAAATTGGAGGAGGATTTAAGGAGCTCCATGACTGTGATTCGGGCTTTGTCTAGGAAGCTTGAGAAGTTGGGGATAAGGTTTATGGTTACAAGAAAAACTGTGAAAGATCCAATTGCTGAGACTGCAGCTTTAGCTCAAAGAAATTCTGAGGACACTCGAACTTTGGCCGTGCAAGAAGACATTCTTGAAAAAGAACTCCTTGAAATGCAAAAGGTCTTACTAGCCATGCAGGAGCAGCAGCAAAAGCAACTTGACCTGATTATTGCAATAGGAGAAAAAAAGAAGCTGATGAAAAGAAAACAGCCACTTGATCAAGAACCAACAATCATTGAAAGACACAATTCTGCCATTGAGGAGTCAAAAGAACTGGAAGCTTATGGAATCTGAGGAAGATGATAGTTTTATTTGATAGATCCAGAATTCCCAGAAGTTATTTCCACATTTTGATTGGGAAGATGAAAGCAGGGTGGATACTCATACAATTTTAGATATTTTGTGGTTCAATTTCAAGAGAATGTTACTTTGAAGGTTTAGATTTGAGAATACCATTTTAGATCCTCTTGAGATAATGTTGATTGAAGAAGAAATGAAAAAGGAGTATATTTTATGTTTTATTAATTTTCAGGTTAGGG

Coding sequence (CDS)

ATGTCATTCCCTTCTCAAAACCTCTTCAAATCTCCAACCCATTTGAAGATTTGTTGCTTCACAAACCCCCTTCCCAGAACCAACCCTCCATTTTCTCTCCCCATTTCACCTCCACGCCTCTCAAATCCCCATCAATTCCACCTTCACAACTTACATTCCCCCAACAGTTCATCTTCCCGCCGGATTTATTGCCAATTCGGCGTCGGAATCTTCGAATCCGAAGACGAAAACGGCGGTGCCCATTTGAAATTGGACACGGTTCTTCTGTACTCTGAACTGGTTTCTCTGTTTTCTTCGGCTGCTTTGTGGGTTGTTTTTGTTGGGAGATTTGTGGGTTCGAATTCGAAGAAGGGGATTTGGGTATTGTTGGGAGATAGGGGTTTTGTGTGGGGGTTTCCTTTGCTTGTGGCTACGGTTGTTCTTAATTCGTGGATTCGAAGGCGGCAATGGAGTCGGGTTTGTGGGCAAACAGGGGGCGGTTCGTTGAAGGTGAATTTGTTGGATAGGGTTGAGAAATTGGAGGAGGATTTAAGGAGCTCCATGACTGTGATTCGGGCTTTGTCTAGGAAGCTTGAGAAGTTGGGGATAAGGTTTATGGTTACAAGAAAAACTGTGAAAGATCCAATTGCTGAGACTGCAGCTTTAGCTCAAAGAAATTCTGAGGACACTCGAACTTTGGCCGTGCAAGAAGACATTCTTGAAAAAGAACTCCTTGAAATGCAAAAGGTCTTACTAGCCATGCAGGAGCAGCAGCAAAAGCAACTTGACCTGATTATTGCAATAGGAGAAAAAAAGAAGCTGATGAAAAGAAAACAGCCACTTGATCAAGAACCAACAATCATTGAAAGACACAATTCTGCCATTGAGGAGTCAAAAGAACTGGAAGCTTATGGAATCTGA

Protein sequence

MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHLHNLHSPNSSSSRRIYCQFGVGIFESEDENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSNSKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLEEDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILEKELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKELEAYGI

Homology

[Close]

BLAST of Sed0002157.1 vs. NCBI nr
Match: XP_038899386.1 (uncharacterized protein LOC120086693 [Benincasa hispida])

HSP 1 Score: 402.5 bits (1033), Expect = 3.1e-108
Identity = 221/305 (72.46%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHLH-----NLHSPN 60
           MS PSQNLF+  +  K CCFTN L R N  FS PIS P L N HQFH H       H+ N
Sbjct: 1   MSLPSQNLFRCSSRFKFCCFTNSLSRNNNLFSPPISSPSLHNLHQFHFHAHRLLTTHN-N 60

Query: 61  SSSSRRIYCQFGVGIFESEDENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSNS 120
           S+S  R YCQ+G+G++ESED        L++VLL SEL+SLFSSA   VVF   FVGS+S
Sbjct: 61  STSRHRSYCQYGIGVYESEDVARSGDFNLESVLLLSELLSLFSSAVFLVVFAVNFVGSSS 120

Query: 121 KKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVC-GQTGGGSLKVNLLDRVEKLE 180
           KK +WVL+GDRG VWGFPLLVATVVLNSWIRRRQW R+C G+T GG LKVNLLDR+EKLE
Sbjct: 121 KKALWVLIGDRGLVWGFPLLVATVVLNSWIRRRQWRRICWGKTSGG-LKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRS MTVIRALSRKLEKLGIRF VTRKT+KDPIAETAALAQRNSE++RTLAVQED+LE
Sbjct: 181 EDLRSLMTVIRALSRKLEKLGIRFRVTRKTLKDPIAETAALAQRNSEESRTLAVQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLEMQKVLLAMQEQQQKQL+LI+AIGEK+KLM+ KQ LDQE +  ERHNSA EESKEL
Sbjct: 241 KELLEMQKVLLAMQEQQQKQLELIVAIGEKRKLMESKQTLDQERSRTERHNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. NCBI nr
Match: KAG6600645.1 (hypothetical protein SDJN03_05878, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.1 bits (1032), Expect = 4.1e-108
Identity = 217/305 (71.15%), Postives = 249/305 (81.64%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR N  FSLPI+   L+N +QFH+  H L +PN+ S
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           S R YC +G+G+FESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVGS+
Sbjct: 61  SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIRALSRKLEKLGIRF+VTRKTV+D IAE+AALAQRNS+DTRTLAVQED+LE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQQQKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. NCBI nr
Match: KAG7031283.1 (hypothetical protein SDJN02_05323 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-107
Identity = 216/305 (70.82%), Postives = 248/305 (81.31%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR N  FSLPI+   L+N +QFH+  H L +PN+ S
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
             R YC +G+G+FESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVGS+
Sbjct: 61  FLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIRALSRKLEKLGIRF+VTRKTV+D IAE+AALAQRNS+DTRTLAVQED+LE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQQQKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. NCBI nr
Match: XP_022941579.1 (uncharacterized protein LOC111446891 [Cucurbita moschata])

HSP 1 Score: 399.1 bits (1024), Expect = 3.5e-107
Identity = 216/305 (70.82%), Postives = 248/305 (81.31%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR N  FSLPI+   L+N +QFH+  H L +PN+ S
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           S R YC +G+G+ ESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVGS+
Sbjct: 61  SLRSYCHYGIGVSESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIRALSRKLEKLGIRF+VTRKTV+D IAE+AALAQRNS+DTRTLAVQED+LE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQQQKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. NCBI nr
Match: XP_023516360.1 (uncharacterized protein LOC111780219 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-105
Identity = 213/305 (69.84%), Postives = 246/305 (80.66%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR+N   SLPI+   L+N  QFH+  H L +PN+ S
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRSNTSLSLPIASRFLTNLCQFHVHTHKLQNPNNLS 60

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           S R YC +G+G+FESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVGS+
Sbjct: 61  SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIRALSRKLEKLGIRF+VTRK+V+D IAE+AALAQRNSEDTRTL +QED+LE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKSVRDSIAESAALAQRNSEDTRTLVMQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQ QKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 241 KELLEIQKVLLAMQEQHQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. ExPASy TrEMBL
Match: A0A6J1FNU5 (uncharacterized protein LOC111446891 OS=Cucurbita moschata OX=3662 GN=LOC111446891 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.7e-107
Identity = 216/305 (70.82%), Postives = 248/305 (81.31%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR N  FSLPI+   L+N +QFH+  H L +PN+ S
Sbjct: 1   MSLSSQNLFRCSNRLKFCSFTNSLPRCNTSFSLPIASRFLTNLYQFHVHTHKLQNPNNLS 60

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           S R YC +G+G+ ESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVGS+
Sbjct: 61  SLRSYCHYGIGVSESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGSS 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIRALSRKLEKLGIRF+VTRKTV+D IAE+AALAQRNS+DTRTLAVQED+LE
Sbjct: 181 EDLRSSTTVIRALSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSQDTRTLAVQEDVLE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQQQKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 241 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 300

[Close]

BLAST of Sed0002157.1 vs. ExPASy TrEMBL
Match: A0A6J1J2E7 (uncharacterized protein LOC111480696 OS=Cucurbita maxima OX=3661 GN=LOC111480696 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.3e-104
Identity = 213/305 (69.84%), Postives = 244/305 (80.00%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS  SQNLF+    LK C FTN LPR +   SLPI+   L+N +QFH+  H L +PN+ S
Sbjct: 51  MSLSSQNLFRCSNRLKFCSFTNSLPRCSTSSSLPIASRFLTNLYQFHVHTHKLQNPNNLS 110

Query: 61  SRRIYCQFGVGIFESED----ENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           S R YC +G+G+FESED    ++ G    L++VLL+SEL SLF+SA   V FV  FVG  
Sbjct: 111 SLRSYCHYGIGVFESEDIEQSDDRGGDFNLESVLLFSELFSLFASAVFLVGFVVNFVGWC 170

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDR  VWGFPLLVATVVLN+WIRRRQW RVCG+   G LKVNLLDR+EKLE
Sbjct: 171 SKKALWVLIGDRRLVWGFPLLVATVVLNTWIRRRQWRRVCGEKASGGLKVNLLDRIEKLE 230

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS TVIR LSRKLEKLGIRF+VTRKTV+D IAE+AALAQRNSEDTRTLAVQED+LE
Sbjct: 231 EDLRSSTTVIRVLSRKLEKLGIRFLVTRKTVRDSIAESAALAQRNSEDTRTLAVQEDVLE 290

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLE+QKVLLAMQEQQQKQL+LIIAIGEK+KL+K KQ  DQEPT  +R NSA EESKEL
Sbjct: 291 KELLEIQKVLLAMQEQQQKQLELIIAIGEKEKLLKSKQRHDQEPTRTQRQNSANEESKEL 350

[Close]

BLAST of Sed0002157.1 vs. ExPASy TrEMBL
Match: A0A6J1C4G5 (uncharacterized protein LOC111008398 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008398 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.1e-102
Identity = 211/305 (69.18%), Postives = 238/305 (78.03%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHL--HNLHSPNSSS 60
           MS PSQNLF      K CCF N   R N  FSLP++ P L   HQFH   HNL  P++ +
Sbjct: 1   MSLPSQNLFTCSGRFKFCCFANSGLRNNTSFSLPVASPCL---HQFHFQKHNLQIPHNLT 60

Query: 61  SRRIYCQFGVGIFESEDENGG----AHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSN 120
           SRR  C + +G+FESE   G         L+++L +SEL+ LFSSA   VVFV  FVG N
Sbjct: 61  SRRSNCLYAIGVFESEQVAGSHDRDGDFNLESILSFSELLCLFSSAVFLVVFVVNFVGYN 120

Query: 121 SKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDRVEKLE 180
           SKK +WVL+GDRG VWGFPLLVATVVLN+WIRRRQW RVC +T  G+L+VNLLDR+EKLE
Sbjct: 121 SKKALWVLIGDRGLVWGFPLLVATVVLNAWIRRRQWRRVCWKTAKGALEVNLLDRIEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRSS   IRALSR+LEKLGIRFMVTRKT++D IAETAALAQRNSEDTRTLAVQEDILE
Sbjct: 181 EDLRSSTATIRALSRQLEKLGIRFMVTRKTLRDSIAETAALAQRNSEDTRTLAVQEDILE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLEMQKVLLAMQEQQ+KQ++LIIAIGEK KLM RKQ LDQE T IERH SA E+SKEL
Sbjct: 241 KELLEMQKVLLAMQEQQRKQIELIIAIGEKGKLMARKQALDQERTRIERHKSANEDSKEL 300

[Close]

BLAST of Sed0002157.1 vs. ExPASy TrEMBL
Match: A0A5A7TN19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00060 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.9e-99
Identity = 211/305 (69.18%), Postives = 236/305 (77.38%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHLH-----NLHSPN 60
           M  PSQNLF+  + LK C FTN LPR N  FS  IS   L + +QFH H       H+ N
Sbjct: 1   MLLPSQNLFRCSSRLKFCSFTNSLPRNNNHFSPSISSSSLQSLNQFHFHAHKLLTTHN-N 60

Query: 61  SSSSRRIYCQFGVGIFESEDENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSNS 120
           S+S  RIYC  G+G++ESED        L++VLL SE + LFSSA   VVFV  FVGS+S
Sbjct: 61  STSRHRIYCHCGIGVYESEDAARSGDFNLESVLLLSESIFLFSSAVFLVVFVLNFVGSSS 120

Query: 121 KKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVC-GQTGGGSLKVNLLDRVEKLE 180
           KKGIW+L+ DRG VWGFPLLVATVVLNSWIRR QW R+C G+T GG LKVNLLDR EKLE
Sbjct: 121 KKGIWMLMCDRGLVWGFPLLVATVVLNSWIRRLQWRRICWGKTSGG-LKVNLLDRFEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRS M VIR LSRKLEKLGIR+ VTRKT+KDPIAETAALAQRNSED +TLAVQEDILE
Sbjct: 181 EDLRSLMIVIRGLSRKLEKLGIRYRVTRKTLKDPIAETAALAQRNSEDAQTLAVQEDILE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLEMQKVLLAMQEQQQKQL+LI+AIGEK+KLM+ KQ  DQE T I+R NSA EE KEL
Sbjct: 241 KELLEMQKVLLAMQEQQQKQLELIVAIGEKRKLMESKQTRDQERTRIDRQNSANEELKEL 300

[Close]

BLAST of Sed0002157.1 vs. ExPASy TrEMBL
Match: A0A1S3BXY7 (uncharacterized protein LOC103494426 OS=Cucumis melo OX=3656 GN=LOC103494426 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.9e-99
Identity = 211/305 (69.18%), Postives = 236/305 (77.38%), Query Frame = 0


Query: 1   MSFPSQNLFKSPTHLKICCFTNPLPRTNPPFSLPISPPRLSNPHQFHLH-----NLHSPN 60
           M  PSQNLF+  + LK C FTN LPR N  FS  IS   L + +QFH H       H+ N
Sbjct: 1   MLLPSQNLFRCSSRLKFCSFTNSLPRNNNHFSPSISSSSLQSLNQFHFHAHKLLTTHN-N 60

Query: 61  SSSSRRIYCQFGVGIFESEDENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGRFVGSNS 120
           S+S  RIYC  G+G++ESED        L++VLL SE + LFSSA   VVFV  FVGS+S
Sbjct: 61  STSRHRIYCHCGIGVYESEDAARSGDFNLESVLLLSESIFLFSSAVFLVVFVLNFVGSSS 120

Query: 121 KKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVC-GQTGGGSLKVNLLDRVEKLE 180
           KKGIW+L+ DRG VWGFPLLVATVVLNSWIRR QW R+C G+T GG LKVNLLDR EKLE
Sbjct: 121 KKGIWMLMCDRGLVWGFPLLVATVVLNSWIRRLQWRRICWGKTSGG-LKVNLLDRFEKLE 180

Query: 181 EDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQEDILE 240
           EDLRS M VIR LSRKLEKLGIR+ VTRKT+KDPIAETAALAQRNSED +TLAVQEDILE
Sbjct: 181 EDLRSLMIVIRGLSRKLEKLGIRYRVTRKTLKDPIAETAALAQRNSEDAQTLAVQEDILE 240

Query: 241 KELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIEESKEL 300
           KELLEMQKVLLAMQEQQQKQL+LI+AIGEK+KLM+ KQ  DQE T I+R NSA EE KEL
Sbjct: 241 KELLEMQKVLLAMQEQQQKQLELIVAIGEKRKLMESKQTRDQERTRIDRQNSANEELKEL 300

[Close]

BLAST of Sed0002157.1 vs. TAIR 10
Match: AT5G65250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 161.8 bits (408), Expect = 8.7e-40
Identity = 119/302 (39.40%), Postives = 167/302 (55.30%), Query Frame = 0


Query: 1   MSFPSQ-NLFKSPTHLKI-----CCFTNPLPRTNPPFSLPISPP-----RLSNPHQFHLH 60
           +S PS+  LF   T ++I      CF     R +   S+    P      +S    F + 
Sbjct: 3   LSLPSRYALFSGSTPVRISRRSNLCFAVSAARASRRDSISFPQPIFLRHVISTQSNFEID 62

Query: 61  NLHSPNSSSSRRIYCQFGVGIFESEDENGGAHLKLDTVLLYSELVSLFSSAALWVVFVGR 120
             +  ++SS           + E    +G     L + + ++E + + SSA + VV    
Sbjct: 63  RNYRAHASSIGSFEDSSSSNLLEDASSDG---FDLGSFVSFAEALCILSSAVISVVLAVN 122

Query: 121 FVGSNSKKGIWVLLGDRGFVWGFPLLVATVVLNSWIRRRQWSRVCGQTGGGSLKVNLLDR 180
           +V           +G +    GF  LV +V   SW+RRRQW R+C +    S   NL+ R
Sbjct: 123 YVVVGE-------IGKKVLSLGFVGLVGSVATGSWLRRRQWMRIC-KGARESEGTNLIRR 182

Query: 181 VEKLEEDLRSSMTVIRALSRKLEKLGIRFMVTRKTVKDPIAETAALAQRNSEDTRTLAVQ 240
           +EKLE+DL+SS +++R LSR LEKLGIRF VTRK +K+PI+ETAALAQ+NSE TR L  Q
Sbjct: 183 LEKLEKDLKSSTSIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQ 242

Query: 241 EDILEKELLEMQKVLLAMQEQQQKQLDLIIAIGEKKKLMKRKQPLDQEPTIIERHNSAIE 292
           ++ILEKEL E+QKVLLAMQEQQ+KQL+LI+ I +  KL +      Q P+  +R N A E
Sbjct: 243 QEILEKELGEIQKVLLAMQEQQRKQLELILTIAKSSKLFESSTSSKQSPS-EQRKNKAEE 292

The following BLAST results are available for this feature:

BLAST of Sed0002157.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899386.1	3.1e-108	72.46	uncharacterized protein LOC120086693 [Benincasa hispida]	[more]
KAG6600645.1	4.1e-108	71.15	hypothetical protein SDJN03_05878, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031283.1	2.0e-107	70.82	hypothetical protein SDJN02_05323 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022941579.1	3.5e-107	70.82	uncharacterized protein LOC111446891 [Cucurbita moschata]	[more]
XP_023516360.1	1.5e-105	69.84	uncharacterized protein LOC111780219 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002157.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002157.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNU5	1.7e-107	70.82	uncharacterized protein LOC111446891 OS=Cucurbita moschata OX=3662 GN=LOC1114468...	[more]
A0A6J1J2E7	1.3e-104	69.84	uncharacterized protein LOC111480696 OS=Cucurbita maxima OX=3661 GN=LOC111480696...	[more]
A0A6J1C4G5	2.1e-102	69.18	uncharacterized protein LOC111008398 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7TN19	4.9e-99	69.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BXY7	4.9e-99	69.18	uncharacterized protein LOC103494426 OS=Cucumis melo OX=3656 GN=LOC103494426 PE=...	[more]

BLAST of Sed0002157.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65250.1	8.7e-40	39.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 230..253
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	PANTHER	PTHR36408	TRANSMEMBRANE PROTEIN	coord: 1..295
None	No IPR available	PANTHER	PTHR36408:SF1	TRANSMEMBRANE PROTEIN	coord: 1..295

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0002157	Sed0002157	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002157.1-exon	Sed0002157.1-exon-LG13:7146220..7146464	exon
Sed0002157.1-exon	Sed0002157.1-exon-LG13:7149269..7149424	exon
Sed0002157.1-exon	Sed0002157.1-exon-LG13:7150391..7150501	exon
Sed0002157.1-exon	Sed0002157.1-exon-LG13:7152285..7152917	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002157.1-three_prime_utr	Sed0002157.1-three_prime_utr-LG13:7146220..7146464	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002157.1-cds	Sed0002157.1-cds-LG13:7149269..7149424	CDS
Sed0002157.1-cds	Sed0002157.1-cds-LG13:7150391..7150501	CDS
Sed0002157.1-cds	Sed0002157.1-cds-LG13:7152285..7152917	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0002157.1	Sed0002157.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane