Pay0020191.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0020191.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 33244612 .. 33246021 (-)
Sequence length	1410
RNA-Seq Expression	Pay0020191.1
Synteny	Pay0020191.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGAACAAAATGAGGCAAATCAACTGCACGCCTGATCGCATTACTTATACTACTCTGCTACACGGGCTCATAAGATGGGGTAAAATTCGAATAGCCTTGAAGACATACAAGGAAATGGTTAGTTCAGGCCACAGTATAGAACCAAAAATGATGAATACCTCCATCAGAGGGTTATGCAGGACATCCTTAAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGACGACTTTCAAGTTATTGATCGGAGTACATATGCCCTGCTGATCCAAGCACTATGTTCAGCAAACATGATTTCGGAGGCACTTGCAAATTTGCATCATATGATTGAAAAAGGCTACCCTCCAACACCGATTATCATTGACGTTATTGTTCAAACACTTTGTCACAGGGGAAGCATCGACGAAACATCGTGTGTTTTGGGGCATGGAATCCCTTTCACAACGATTTCTTTTGACTTGTTAATGCATGAGCTTAATACACAGGGAATGTATATCAGTGCTTGAAATGTATATGCTTTGGCTTTGAAACAAGGTGATAACCCC

mRNA sequence

GCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGAACAAAATGAGGCAAATCAACTGCACGCCTGATCGCATTACTTATACTACTCTGCTACACGGGCTCATAAGATGGGGTAAAATTCGAATAGCCTTGAAGACATACAAGGAAATGGTTAGTTCAGGCCACAGTATAGAACCAAAAATGATGAATACCTCCATCAGAGGGTTATGCAGGACATCCTTAAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGACGACTTTCAAGTTATTGATCGGAGTACATATGCCCTGCTGATCCAAGCACTATGTTCAGCAAACATGATTTCGGAGGCACTTGCAAATTTGCATCATATGATTGAAAAAGGCTACCCTCCAACACCGATTATCATTGACGTTATTGTTCAAACACTTTGTCACAGGGGAAGCATCGACGAAACATCGTGTGTTTTGGGGCATGGAATCCCTTTCACAACGATTTCTTTTGACTTGTTAATGCATGAGCTTAATACACAGGGAATGTATATCAGTGCTTGAAATGTATATGCTTTGGCTTTGAAACAAGGTGATAACCCC

Coding sequence (CDS)

ATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGA

Protein sequence

MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC

Homology

[Close]

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.5e-27
Identity = 63/197 (31.98%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 13  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLE 72
           +S FN L       +Q   A  +L ++ SYGL P+ +T+  +++ Y ++G+LD A R+ E
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248

Query: 73  QMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLK 132
           QM+  G + ++ ++ V+V+ FCK G+ + AL  ++ +  + G    +      T+N L+ 
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ-----YTFNTLVN 308

Query: 133 GLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKP 192
           GLC  G  K  + ++  M +    PD+YTY  ++ GLCK+G   EA+E+ ++       P
Sbjct: 309 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 368

Query: 193 SVVTFNTLFNGYCKEGR 209
           + VT+NTL +  CKE +
Sbjct: 369 NTVTYNTLISTLCKENQ 380

[Close]

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 63/194 (32.47%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 16  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQML 75
           +N L   +  E   H A  + + +  +GL P+  TY  +I   CK G ++ A   L+QM 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 76  GRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLC 135
            RG  PN+ T T LV+ F ++G   +A  ++    R +   G  P+  V TYN L+ G C
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVL----REMNDNGFSPS--VVTYNALINGHC 432

Query: 136 YVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVV 195
             G+ +  + +L  MK+  L PD+ +Y  ++ G C+    DEAL +  E  E G+KP  +
Sbjct: 433 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 492

Query: 196 TFNTLFNGYCKEGR 209
           T+++L  G+C++ R
Sbjct: 493 TYSSLIQGFCEQRR 500

[Close]

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.5e-26
Identity = 61/197 (30.96%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 12  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVL 71
           ++  +  L        +   A  L+  +   G+ PN  TY ++I   C + + + A  +L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381

Query: 72  EQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL 131
            QML +G  PN  T   L+N +CKRG  + A+++VEL+  R      K +   +TYN L+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR------KLSPNTRTYNELI 441

Query: 132 KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKP 191
           KG C     K   +L KM +  ++PD+ TY  L+DG C+ G  D A  L +   + GL P
Sbjct: 442 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 501

Query: 192 SVVTFNTLFNGYCKEGR 209
              T+ ++ +  CK  R
Sbjct: 502 DQWTYTSMIDSLCKSKR 512

[Close]

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-25
Identity = 60/201 (29.85%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 12  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVL 71
           ++  F+ L   FV E +   A++L   +   G+AP+  TY  +I  +CK+  LD A +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391

Query: 72  EQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL 131
           + M+ +G +PN  T  +L+N +CK  +    LE+   +  R GV          TYN L+
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GV-----VADTVTYNTLI 451

Query: 132 KGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLK 191
           +G C +G+      +  +M    + P+I TYK+L+DGLC  G S++ALE+  + E++ ++
Sbjct: 452 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 511

Query: 192 PSVVTFNTLFNGYCKEGRPVD 212
             +  +N + +G C   +  D
Sbjct: 512 LDIGIYNIIIHGMCNASKVDD 526

[Close]

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.5e-25
Identity = 68/204 (33.33%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 10  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGR 69
           T  +  +  +   F        A KL   +   GL P+  T+  +I  YCK G + +A R
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442

Query: 70  VLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNC 129
           V   M+  G +PN  T T L++  CK G    A E++  + +     G +P   + TYN 
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----GLQP--NIFTYNS 502

Query: 130 LLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENG 189
           ++ GLC  G  +  V L  + +   L  D  TY  LMD  CK G  D+A E+  E    G
Sbjct: 503 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 562

Query: 190 LKPSVVTFNTLFNGYCKEGRPVDG 213
           L+P++VTFN L NG+C  G   DG
Sbjct: 563 LQPTIVTFNVLMNGFCLHGMLEDG 580

[Close]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL
Match: A0A5D3DMN4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00190 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.5e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 70  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 129

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 130 KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 189

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 190 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 249

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 250 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 284

[Close]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL
Match: A0A1S3B7W4 (pentatricopeptide repeat-containing protein At5g39710-like OS=Cucumis melo OX=3656 GN=LOC103487124 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.5e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 215

[Close]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL
Match: A0A5A7TMX5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005890 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.2e-120
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFN+LFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 148 MSQKDCQIRTRSISEFNHLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 207

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 208 KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 267

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKM KNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 268 TVQVQTYNCLLKGLCYVGEWKRPVMLTKM-KNSLIPDIYTYKVLMDGLCKVGRSDEALEL 327

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 328 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 361

[Close]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.3e-82
Identity = 161/214 (75.23%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQK C+I  ++I EFN LFM+FVSE++   A KLLSN+SSYGL PNCRT+ IMIR YCK
Sbjct: 93  MSQKSCEI--QNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCK 152

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KG+L+NA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVELVGR     G KP
Sbjct: 153 KGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR----NGRKP 212

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALE 180
           T  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+E
Sbjct: 213 T--VQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 272

Query: 181 LPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI 214
           L +EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI
Sbjct: 273 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGI 298

[Close]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.4e-81
Identity = 160/214 (74.77%), Postives = 178/214 (83.18%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQK C+I  ++I EFN LFM+FVSE++   A KLLSN++SYGL PN RT+ IMIR YCK
Sbjct: 93  MSQKSCEI--QNICEFNDLFMEFVSEDELDLALKLLSNLTSYGLVPNSRTFSIMIRCYCK 152

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KG+LDNA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVELVGR     G KP
Sbjct: 153 KGDLDNAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR----NGRKP 212

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALE 180
           T  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+E
Sbjct: 213 T--VQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 272

Query: 181 LPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI 214
           L +EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI
Sbjct: 273 LLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGI 298

[Close]

BLAST of Pay0020191.1 vs. NCBI nr
Match: TYK24906.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 450.7 bits (1158), Expect = 7.2e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 70  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 129

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 130 KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 189

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 190 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 249

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 250 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 284

[Close]

BLAST of Pay0020191.1 vs. NCBI nr
Match: XP_008443567.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 7.2e-123
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 215

[Close]

BLAST of Pay0020191.1 vs. NCBI nr
Match: KAA0044228.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-120
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQKDCQIRTRSISEFN+LFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK
Sbjct: 148 MSQKDCQIRTRSISEFNHLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 207

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP
Sbjct: 208 KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 267

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALEL 180
           TVQVQTYNCLLKGLCYVGEWKRPVMLTKM KNSLIPDIYTYKVLMDGLCKVGRSDEALEL
Sbjct: 268 TVQVQTYNCLLKGLCYVGEWKRPVMLTKM-KNSLIPDIYTYKVLMDGLCKVGRSDEALEL 327

Query: 181 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 216
           PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Sbjct: 328 PNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC 361

[Close]

BLAST of Pay0020191.1 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 4.7e-82
Identity = 161/214 (75.23%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQK C+I  ++I EFN LFM+FVSE++   A KLLSN+SSYGL PNCRT+ IMIR YCK
Sbjct: 93  MSQKSCEI--QNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCK 152

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KG+L+NA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVELVGR     G KP
Sbjct: 153 KGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR----NGRKP 212

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALE 180
           T  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+E
Sbjct: 213 T--VQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 272

Query: 181 LPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI 214
           L +EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI
Sbjct: 273 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGI 298

[Close]

BLAST of Pay0020191.1 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 4.7e-82
Identity = 161/214 (75.23%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCK 60
           MSQK C+I  ++I EFN LFM+FVSE++   A KLLSN+SSYGL PNCRT+ IMIR YCK
Sbjct: 93  MSQKSCEI--QNICEFNDLFMEFVSEDELDLALKLLSNLSSYGLVPNCRTFSIMIRCYCK 152

Query: 61  KGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKP 120
           KG+L+NA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVELVGR     G KP
Sbjct: 153 KGDLENAARVLGQMLGRGCNPNDATITVLVNAFCKRGKMQKALEMVELVGR----NGRKP 212

Query: 121 TVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALE 180
           T  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+E
Sbjct: 213 T--VQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAME 272

Query: 181 LPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI 214
           L +EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI
Sbjct: 273 LLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGI 298

[Close]

BLAST of Pay0020191.1 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-28
Identity = 63/197 (31.98%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 13  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLE 72
           +S FN L       +Q   A  +L ++ SYGL P+ +T+  +++ Y ++G+LD A R+ E
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248

Query: 73  QMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLK 132
           QM+  G + ++ ++ V+V+ FCK G+ + AL  ++ +  + G    +      T+N L+ 
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ-----YTFNTLVN 308

Query: 133 GLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKP 192
           GLC  G  K  + ++  M +    PD+YTY  ++ GLCK+G   EA+E+ ++       P
Sbjct: 309 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 368

Query: 193 SVVTFNTLFNGYCKEGR 209
           + VT+NTL +  CKE +
Sbjct: 369 NTVTYNTLISTLCKENQ 380

[Close]

BLAST of Pay0020191.1 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 63/194 (32.47%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 16  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQML 75
           +N L   +  E   H A  + + +  +GL P+  TY  +I   CK G ++ A   L+QM 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 76  GRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLC 135
            RG  PN+ T T LV+ F ++G   +A  ++    R +   G  P+  V TYN L+ G C
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVL----REMNDNGFSPS--VVTYNALINGHC 432

Query: 136 YVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVV 195
             G+ +  + +L  MK+  L PD+ +Y  ++ G C+    DEAL +  E  E G+KP  +
Sbjct: 433 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 492

Query: 196 TFNTLFNGYCKEGR 209
           T+++L  G+C++ R
Sbjct: 493 TYSSLIQGFCEQRR 500

[Close]

BLAST of Pay0020191.1 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-27
Identity = 61/197 (30.96%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 12  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVL 71
           ++  +  L        +   A  L+  +   G+ PN  TY ++I   C + + + A  +L
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381

Query: 72  EQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL 131
            QML +G  PN  T   L+N +CKRG  + A+++VEL+  R      K +   +TYN L+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR------KLSPNTRTYNELI 441

Query: 132 KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKP 191
           KG C     K   +L KM +  ++PD+ TY  L+DG C+ G  D A  L +   + GL P
Sbjct: 442 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 501

Query: 192 SVVTFNTLFNGYCKEGR 209
              T+ ++ +  CK  R
Sbjct: 502 DQWTYTSMIDSLCKSKR 512

[Close]

BLAST of Pay0020191.1 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-26
Identity = 60/201 (29.85%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 12  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVL 71
           ++  F+ L   FV E +   A++L   +   G+AP+  TY  +I  +CK+  LD A +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391

Query: 72  EQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL 131
           + M+ +G +PN  T  +L+N +CK  +    LE+   +  R GV          TYN L+
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GV-----VADTVTYNTLI 451

Query: 132 KGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLK 191
           +G C +G+      +  +M    + P+I TYK+L+DGLC  G S++ALE+  + E++ ++
Sbjct: 452 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 511

Query: 192 PSVVTFNTLFNGYCKEGRPVD 212
             +  +N + +G C   +  D
Sbjct: 512 LDIGIYNIIIHGMCNASKVDD 526

[Close]

BLAST of Pay0020191.1 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-26
Identity = 68/204 (33.33%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 10  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGR 69
           T  +  +  +   F        A KL   +   GL P+  T+  +I  YCK G + +A R
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442

Query: 70  VLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNC 129
           V   M+  G +PN  T T L++  CK G    A E++  + +     G +P   + TYN 
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI----GLQP--NIFTYNS 502

Query: 130 LLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENG 189
           ++ GLC  G  +  V L  + +   L  D  TY  LMD  CK G  D+A E+  E    G
Sbjct: 503 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 562

Query: 190 LKPSVVTFNTLFNGYCKEGRPVDG 213
           L+P++VTFN L NG+C  G   DG
Sbjct: 563 LQPTIVTFNVLMNGFCLHGMLEDG 580

The following BLAST results are available for this feature:

BLAST of Pay0020191.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFF1	3.5e-27	31.98	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9FIX3	1.7e-26	32.47	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	6.5e-26	30.96	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q0WKV3	2.5e-25	29.85	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q0WVK7	5.5e-25	33.33	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of Pay0020191.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMN4	3.5e-123	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B7W4	3.5e-123	100.00	pentatricopeptide repeat-containing protein At5g39710-like OS=Cucumis melo OX=36...	[more]
A0A5A7TMX5	1.2e-120	99.07	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1F9P1	2.3e-82	75.23	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1J506	7.4e-81	74.77	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]

BLAST of Pay0020191.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK24906.1	7.2e-123	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008443567.1	7.2e-123	100.00	PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Cucumis m...	[more]
KAA0044228.1	2.6e-120	99.07	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAG6580429.1	4.7e-82	75.23	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022935128.1	4.7e-82	75.23	pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]	[more]

BLAST of Pay0020191.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53700.1	2.5e-28	31.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	1.2e-27	32.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	4.6e-27	30.96	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12300.1	1.8e-26	29.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	3.9e-26	33.33	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 194..213 e-value: 3.6E-4 score: 18.5 coord: 50..82 e-value: 4.8E-7 score: 27.6 coord: 159..193 e-value: 1.3E-6 score: 26.2 coord: 85..107 e-value: 0.0012 score: 16.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 164..205 e-value: 5.8E-12 score: 45.6 coord: 53..95 e-value: 2.3E-10 score: 40.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 47..81 score: 11.443655
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 157..191 score: 12.441133
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 145..213 e-value: 2.3E-18 score: 68.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..144 e-value: 2.2E-24 score: 87.8
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 9..213
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 9..213

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0020191	Pay0020191	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0020191.1-three_prime_utr	Pay0020191.1-three_prime_utr-chr04:33244612..33245168	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0020191.1-exon	Pay0020191.1-exon-chr04:33244612..33246021	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0020191.1-cds	Pay0020191.1-cds-chr04:33245169..33245816	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0020191.1-five_prime_utr	Pay0020191.1-five_prime_utr-chr04:33245817..33246021	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0020191.1	Pay0020191.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding