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Pay0008273.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTAAGATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTAAGCAGATCCTGACGATGAAGGCAAGTTGAGGGAGAATAGGAAGAAAGACTCGAAGGCGTTGGTGATTATTCAACAAGCAGTCCATGACAGTGTTTTTTCGCGGATTGCTGCAACAACAACGTCAAAACAAGCGTAGCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTGTGGTTAAATTTCAATCACTTAGACGATACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTAAGGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCCAAGGTTTGATCACGTTGTGGCTGCAATAGAAGAATCAAAGAACCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTGAAGCACATGAGTCGAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATACAGTTTCAAAGTATAATGACAGTGATCGTGTGATAACTCGAGGCCAAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTACCAAAAAAGGGTGTAACCGAAATGAAGAACAAAGGCAGTTTGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGGTACAAAAATCAGAGAGCCAATTTCGCAGCAGAGAATGAAGCATTTGAGAATAATGGAAAGGGTGAAAATAAGCTTTTTATGACAAACATACCCAGTGATCAAAAGACAGCAGAGGTGTGGTTCATTGATAGCGGTTGTTCGAATCACATGACAGGTTTGAAGCCTGTATTCAATGAGCTAAACGAAAGAGAAAAGTTGAAGGTAGAGCTCGGAAACGGTAAGGAGCTACAAGTAGAAGGCAAAGGAATGGTGGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTTTGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGTATTCTATCTTGTTTGATGATGGTGCGTGCTTGATAAAAAATAAGCAATCAGGACGAGTTTTGGCGAAAGTAAAGATGACCCAAAGCAAAATGTTTCTGCTGGAAGTTTCAAATGTAGAAAGTTTTGCTCTTACTGCTACTGCAACAAATACAACAAAGAACAACTCGGAGTTATGGCATTTAAGGTATGGACATCTTAATATTAAAGGGCTTTCTTTGCTAAATCAAAGAGATATGGTTATTGGGTTACCGAAAATCAGTGCTATTAATATCTGTGAAGGATGTGTGTATGGAAAACAAACTCGAAAATCTTTTCCTATTGGGAAAGCTTGGAGAGCCTCCAAGTGTCTCGAGCTAATTCATGTTGATCTGTGCGGGCCAATGCAAACAAAGTCTCTTGGTGGGTGCTTTTATTTCTTGATTTTTATAGATGATTATAGCCGTATGAGTTGGATATATTTTCTAGAAAGAAAATTAGAAACATTTGAGAAGTTCAAGCATTTCAAGGCAAAGGTAAAAAAGCATAGTGGCATGTTCATCAAATCTCTTCGCAGTGATAGAGGTGGAGAATTTTTGTCAAACAACTTTAACCATTTTTGCAAGGAACATGGCATCCATAGGGAGTTGACAACACCTTATACTCCGGAGCAAAATGGGGTAGTCGAGAGGAAGAATCGAACTATGGTGGAGATGACAAGAAGCAGTTGCAAATGA ATGGGCAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTAAGATCTCAAGACTTATGGGACTTATTGAGGGAGAATAGGAAGAAAGACTCGAAGGCGTTGGTGATTATTCAACAAGCAGTCCATGACAGTCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTGTGGTTAAATTTCAATCACTTAGACGATACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTGTCACGGGCAACGACAATTATTAGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCCAAGGTTTGATCACGTTGTGGCTGCAATAGAAGAATCAAAGAACCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTGAAGCACATGAGTCGAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATACAGTTTCAAAGTATAATGACAGTGATCGTGTGATAACTCGAGGCCAAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTACCAAAAAAGGGTGTAACCGAAATGAAGAACAAAGGCAGTTTGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTTGAAGCCTGTATTCAATGAGCTAAACGAAAGAGAAAAGTTGAAGGTAGAGCTCGGAAACGGTAAGGAGCTACAAGTAGAAGGCAAAGGAATGGTGGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTTTGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGTATTCTATCTTGTTTGATGATGAAAGAAAATTAGAAACATTTGAGAAGTTCAAGCATTTCAAGGCAAAGGTAAAAAAGCATAGTGGCATGTTCATCAAATCTCTTCGCAGTGATAGAGGTGGAGAATTTTTGTCAAACAACTTTAACCATTTTTGCAAGGAACATGGCATCCATAGGGAGTTGACAACACCTTATACTCCGGAGCAAAATGGGGTAGTCGAGAGGAAGAATCGAACTATGGTGGAGATGACAAGAAGCAGTTGCAAATGA ATGGGCAACAATGGCAATGCTATGGGTACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTAAGATCTCAAGACTTATGGGACTTATTGAGGGAGAATAGGAAGAAAGACTCGAAGGCGTTGGTGATTATTCAACAAGCAGTCCATGACAGTCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTTGTGGTTAAATTTCAATCACTTAGACGATACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTGTCACGGGCAACGACAATTATTAGATCAGACTATAGTGGAGAAAGTATTGAGAAGTTTGACTCCAAGGTTTGATCACGTTGTGGCTGCAATAGAAGAATCAAAGAACCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTGAAGCACATGAGTCGAGAATCAATAGATCGATGGAAAGAAACGAAGAAAAAGCGTTTCAGGTAAAGGATACAGTTTCAAAGTATAATGACAGTGATCGTGTGATAACTCGAGGCCAAGGAAGAGGAGGATATCGTGGTCGAGGTCGTGGTACCAAAAAAGGGTGTAACCGAAATGAAGAACAAAGGCAGTTTGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTTGAAGCCTGTATTCAATGAGCTAAACGAAAGAGAAAAGTTGAAGGTAGAGCTCGGAAACGGTAAGGAGCTACAAGTAGAAGGCAAAGGAATGGTGGGAATTGAAACTCACCATGGAAATAGAATTCTCACAAATGTTCAGTTTGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGTATTCTATCTTGTTTGATGATGAAAGAAAATTAGAAACATTTGAGAAGTTCAAGCATTTCAAGGCAAAGGTAAAAAAGCATAGTGGCATGTTCATCAAATCTCTTCGCAGTGATAGAGGTGGAGAATTTTTGTCAAACAACTTTAACCATTTTTGCAAGGAACATGGCATCCATAGGGAGTTGACAACACCTTATACTCCGGAGCAAAATGGGGTAGTCGAGAGGAAGAATCGAACTATGGTGGAGATGACAAGAAGCAGTTGCAAATGA MGNNGNAMGTTQPLIPIFKGEGYEFWSIRMKTLLRSQDLWDLLRENRKKDSKALVIIQQAVHDSLILQKAFQGDSRVLVVKFQSLRRYFETLMMKNGESIADFCHGQRQLLDQTIVEKVLRSLTPRFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDTVSKYNDSDRVITRGQGRGGYRGRGRGTKKGCNRNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCLKPVFNELNEREKLKVELGNGKELQVEGKGMVGIETHHGNRILTNVQFVPDIGYNLLSVGQLMESGYSILFDDERKLETFEKFKHFKAKVKKHSGMFIKSLRSDRGGEFLSNNFNHFCKEHGIHRELTTPYTPEQNGVVERKNRTMVEMTRSSCK Homology
BLAST of Pay0008273.1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13 Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 63.2 bits (152), Expect = 7.8e-09 Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.8e-05 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy Swiss-Prot
Match: Q87040 (Pro-Pol polyprotein OS=Simian foamy virus (isolate chimpanzee) OX=298339 GN=pol PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.4e-05 Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy Swiss-Prot
Match: P14350 (Pro-Pol polyprotein OS=Human spumaretrovirus OX=11963 GN=pol PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 1.5e-04 Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy TrEMBL
Match: A0A5A7UQM0 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 PE=4 SV=1) HSP 1 Score: 556.6 bits (1433), Expect = 8.3e-155 Identity = 320/497 (64.39%), Postives = 347/497 (69.82%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy TrEMBL
Match: A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 3.0e-152 Identity = 322/554 (58.12%), Postives = 347/554 (62.64%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 3.2e-146 Identity = 327/604 (54.14%), Postives = 340/604 (56.29%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy TrEMBL
Match: A0A5D3CL10 (UBN2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00080 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.6e-129 Identity = 265/374 (70.86%), Postives = 284/374 (75.94%), Query Frame = 0
BLAST of Pay0008273.1 vs. ExPASy TrEMBL
Match: A0A5A7TZP7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00180 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 3.0e-120 Identity = 261/397 (65.74%), Postives = 280/397 (70.53%), Query Frame = 0
BLAST of Pay0008273.1 vs. NCBI nr
Match: KAA0055915.1 (copia protein [Cucumis melo var. makuwa]) HSP 1 Score: 556.6 bits (1433), Expect = 1.7e-154 Identity = 320/497 (64.39%), Postives = 347/497 (69.82%), Query Frame = 0
BLAST of Pay0008273.1 vs. NCBI nr
Match: TYK28117.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 548.1 bits (1411), Expect = 6.1e-152 Identity = 322/554 (58.12%), Postives = 347/554 (62.64%), Query Frame = 0
BLAST of Pay0008273.1 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]) HSP 1 Score: 528.1 bits (1359), Expect = 6.6e-146 Identity = 327/604 (54.14%), Postives = 340/604 (56.29%), Query Frame = 0
BLAST of Pay0008273.1 vs. NCBI nr
Match: KAE8650579.1 (hypothetical protein Csa_010963 [Cucumis sativus]) HSP 1 Score: 486.5 bits (1251), Expect = 2.2e-133 Identity = 271/374 (72.46%), Postives = 290/374 (77.54%), Query Frame = 0
BLAST of Pay0008273.1 vs. NCBI nr
Match: TYK12002.1 (UBN2 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 472.6 bits (1215), Expect = 3.3e-129 Identity = 265/374 (70.86%), Postives = 284/374 (75.94%), Query Frame = 0
BLAST of Pay0008273.1 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 7.8e-04 Identity = 20/70 (28.57%), Postives = 35/70 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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