PI0025744.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0025744.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	chr11: 14769745 .. 14774051 (-)
Sequence length	811
RNA-Seq Expression	PI0025744.1
Synteny	PI0025744.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGAAAAAACAAGAAGAAGAGGAACAATATGTCCGGTGAAGGAGTGGTAGGAGATCGGTCAAGCAAAGAATATGGAGAAGGATCATCGAACTCGCCACCAACGGCAACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGACTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGACCACCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTAGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCAGCTTATGAAGAAAATGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTACTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACCACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATAATATTTCTTCTTCTTCTTCTTCTTCTTCCATTATGCACTTCTCAACTCCTTGAACAACTTCATCACTACTTCAATTTTATGATATCTTCATCAATTTCTTCCCCATCATCACATCAATATTATGGTAATTTTCTTACTTGATCTCTCTTTAATTATTTGTTTTTATTTATATTTTTGCCTTTTTTCCTATTATGGAATGATTCTATTTTGATATATGGAAATTTTCATTGATGGGTTGATCAGGAAGTATGAACTATTATTCAAGTTTTTTGTTTTTATTTTCTAAATCTAGATTTGTATGAATCTAGATTTTATCAAATTTTATTAAGTGTTGTGTTTGGTTTTTTTAGTTTAACGTAGTAAAAGAATTTGAACTACAAACTTAATAATCGTTAACAATACATCATATATCAGCTAAGTTATGCGAGTTTTTAATTTTTTTTTTTAATAGTAGCTCAAATAAAAGCTAGATTTCATTGTTAATTTCTCTATGAACACAAATGATAGTGGGAAATTGTTTTTCTCTATGAAGTTTTTGTATAATGCACATGGCATAATACTAATAATAGATCGTTGTTGCTGTGTGTTTTTTTTTCCTGGAGTGATTTTATATTATAAAAATTGATTAATTTAATAACTATGGTGATCACCAGTGTTAGAATTATTTGAGAGAAAAATCAAATAAAAATATAATAAATCGTGCAACAATACTTGTTTGAACACCGTACAGATTCCTAATGTGTTTTCAGTGAATTATTTAGACAACACATTGCAGTTTTAAATTTGTGATTTCTATAGAGTTCTTTTAAGATTCTTTCTATGTAGATAGTGCACTGACTAATGGTCTTGTCAGATATATGTGATTCACTTTTCTTTTCTTTTTTTTTTTAATCATATCAAATTCATATAAATAAAAATAAGTTCTTTCTTTAATAAAGAAGTGGGGTTAGGAAATTTTTTAAAAACCAGAGGGAAATTTTTTTATCATTTAACTGAATTTTATTACTTGAATTCCATCCAAATCAAGTTACTAATTAAGATTTTCTTTGATAATTATTTAAATCTCCATTTTTTTCTAAATTATTTTCATCTTTTTAAGAGAATGTTTGATTTCATAATCAAATTTCAAAACAAAATAAGTTTTTCAAAACTACTTCATAATAATTTTTGCAGAAAGAGGTATGGAAAAATAAAGAAATTCCCAAGTAGAAATAATCTACTCACAATTTTAAATTTTAAAACATCAAACTTGACTATTAATCAAAGTTTCAATATTTTTTTTCTTTTTTGTCTTTAAATTTTTAAACTTAATTTATAACACCACTTTCACTTATTTATATATATATATTTATATATTGTTTTGTCTTGTTTTCACAAACATTTTCAAAATAAGCTGAGTTTTGGAATACTAAAAAATATTTTTTAAAAAACCTTTTTTTTTTTTTAAACTCAACTAATAATTCAAATTTAAAAGAGTATTGTAATGGTAAAACAAGCACATTTTTCAAACACTAATGCTTAAAATTTTATTAATGGTAAACTTGTTTAATTTAGGATTAATGACCCAAAAAATTTAAGAAAATTTGTAAAAAAAATAAAAAAATAGACCAAATATTTACCCAAAATAAATTTCTTTTAGTATTTAAAAAAAAAAAAAAACCAAAAATTAATTTGAAGGGTTTTGTTTTTACATGCTTTTTAGGTTATCCCTTTTGTTAATTTTCTCTTTGTTTTCCCTCCCCTCCCACCTGATCAATTATGATTATTTTATTAATTACACCAATTATCAACCCCAACTCATCATTCTCAATAGAATCTCTCGAGTATTGTGCAGGAAGAGAGAAGACCCATTTGGTCATTAAAAAAGAATATCAGTTTGCTTTTTAATTTTATTTAAATTTTTTAATTAATTCTTTTTAAATAATAACTTTGAACTATAACACTCACAATCAATATCCTTACCTTAATGTTAATTGGCAGGATTTTCTATTACACAATATCATATATGTGTAGGATTCGATCCCCTATTTTTATAATTATTGAATTAATTAGAAAAAAACATCCACCTGACTATTTCTTCAAGTAGATTGGGTGGTTTGTCTGAAGTTGGATTTTTGTAGGACAGTAAGTTTTTTATTCTCCCATTTCATCAACAATATGATATTGATTGGTTTCTATGTCTCAAAATTCATATATATAAATATTTTTTCCCTATTTTGGGAGAGATCAGTTAAGTAAAAAGCCTTCTACTTTGTGCTTCCCATTTCACTTCATTCTTATGTTTAACTTCAACACAAATATGTCTTTCTTTTGTACAACTTTGCCCTAAACTCTCACATGTTCTTGTCGGCCTACCTCATAGGGAAGTCCAAATTTTTTTTTTTTTTTTTAATTATTGTTGTTGTTGTTATGATTGTTATTATTATATTTCAAATTGAATTTTTTTCTGTCTCTTGATCTATCTATTTCCTGTAAAGAAAAATAAACCCTTGAATAGAGTGATCAAAATTAAAATTTTATTTTTGTTCTTCCCAAATGCTTGTTTTTAGCTACCCTTTTATATATTATTTGTACACTTTCTACACGTGCAATTTCCTTTTTATAGTTGTATATATATTTATAATTTATATGTATATATGTATGTATTTTTTGGGTTTGTGAGTTACATTACATATATATATTCCATTGGAAAAACTTTTCACAAGACATTCTTGGCTGTCTCTCCTTCTTAGCTTCAATTTCCAAGGATGCCATTTGTCTCTAAGTATATTAATTAAATATATGGATTGGGAATTTTTCAAGTGAATTATTTTAACCTTTCTCTTTTTCTCTCTCCCTCTAGTTTCTAACCCTATTTTGCAAAATGTTTTCAGGGAGACAGGACAAAAACTTCTATTAAGTAGCTTTATTTTATATTAGTAGAGATATCTTTGGATGACTCAAAATTTTTTAATGGCTGATTTTGAGAAGTTAGTGGTGTGATTTTTAAAATGAGAAGAAGCTGGAATAGAAGTTATTAATTGCATTTTGGAAGGATTGAACCATTTAGGGTTTTCTTTTTATGTATGTTATATATATATGTTTGTATTGGAACTGTAATTTATATATTGAACTTTCATTATATGATTATTTTGGTATACTCTTACCAAAGAGTGAAATGTTGATAAGCTGTAATTTGAATCAAACACACTATAATTTGAGTTTGGTTTGACATATCTTTTGGATTATGTGTTTAAAAGAAGTTCTCAATTATATATGGTTGTTCAAGTTTCTCCGCTAATTTTTAGTGGTAATATGTTTTATCTTAAAAATATTCTACTATTTATGCATTTTTTTTAGTATAACAATTGTAGATGGTAAAGTTTATCCTTTAACAAAAAAGTTGATATCTTAACTATTAAGATATGTTATGTCAATGTATCAAGTCTAACTTAAGTGAGTTTTTGAAACACTTCACACCGACACCTAATTACCAAATAATTTCTGAAATTTCCTAATTCAACATCGAATTATTGTTCATTTTGTCTTCGTTTCATTATCGTCTTTCGTGTAGTTTGTTTTTTTATCTGACTCTATGAATAACTGATGAACAAAATTTAATTTTCAATATTTGAACGCAGGACAAAACCTTGGAGCAAAAGAATCAAAGAGAACAGAATGAAATATATTCAAAAGCAGAAATGTATTGAAAAGGCTAAAACTTTGAAGTTGTTTTTTCC

mRNA sequence

GAAAAAGAAAAAACAAGAAGAAGAGGAACAATATGTCCGGTGAAGGAGTGGTAGGAGATCGGTCAAGCAAAGAATATGGAGAAGGATCATCGAACTCGCCACCAACGGCAACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGACTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGACCACCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTAGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCAGCTTATGAAGAAAATGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTACTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACCACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATAATATTTCTTCTTCTTCTTCTTCTTCTTCCATTATGCACTTCTCAACTCCTTGAACAACTTCATCACTACTTCAATTTTATGATATCTTCATCAATTTCTTCCCCATCATCACATCAATATTATGGACAAAACCTTGGAGCAAAAGAATCAAAGAGAACAGAATGAAATATATTCAAAAGCAGAAATGTATTGAAAAGGCTAAAACTTTGAAGTTGTTTTTTCC

Coding sequence (CDS)

ATGTCCGGTGAAGGAGTGGTAGGAGATCGGTCAAGCAAAGAATATGGAGAAGGATCATCGAACTCGCCACCAACGGCAACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGACTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGACCACCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTAGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCAGCTTATGAAGAAAATGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTACTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACCACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATAATATTTCTTCTTCTTCTTCTTCTTCTTCCATTATGCACTTCTCAACTCCTTGA

Protein sequence

MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSSSSSSSIMHFSTP

Homology

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BLAST of PI0025744.1 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67
Identity = 132/178 (74.16%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 13  KEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLD 72
           K   E S + PP   TPSRYESQKRRDWNTFGQYLKNQRPPV +S C+ NHVL+FLRYLD
Sbjct: 9   KSLMESSGSEPP--VTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLD 68

Query: 73  QFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFAS 132
           QFGKTKVHV GCMFYGQPEPPAPCTCPL+QAWGSLDALIGRLRAAYEENGG PETNPFAS
Sbjct: 69  QFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFAS 128

Query: 133 ASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSS 191
            +IRVYLREVRECQAKARGIPYKKKKK  K  P            +DS++++++ S S
Sbjct: 129 GAIRVYLREVRECQAKARGIPYKKKKK-KKPTPEMGGGR------EDSSSSSSSFSFS 177

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BLAST of PI0025744.1 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-59
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 16  GEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFG 75
           G    +SPP   TPSRYESQKRRDWNTF QYLKN +PP+ALS+C+  HV+EFL+YLDQFG
Sbjct: 18  GPSFVSSPP--ATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFG 77

Query: 76  KTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASI 135
           KTKVHV  C ++G  +PP+PC+CPLKQAWGSLDALIGRLRAAYEENGG P++NPFA+ ++
Sbjct: 78  KTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAV 137

Query: 136 RVYLREVRECQAKARGIPYKKKKKSNKQQPPT 168
           R+YLREVRE QAKARGIPY+KKK   +++PPT
Sbjct: 138 RIYLREVRESQAKARGIPYEKKK---RKRPPT 164

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BLAST of PI0025744.1 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 104/151 (68.87%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 19  SSNSPPTATTP------SRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLD 78
           +  +P  A  P      SRYESQKRRDWNTF QYL+N RPP+ L++C+  HV+EFLRYLD
Sbjct: 13  AGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLD 72

Query: 79  QFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFAS 138
           QFGKTKVH  GC FYGQP PP PC CPL+QAWGSLDALIGRLRAAYEE+GG+PE+NPFA+
Sbjct: 73  QFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAA 132

Query: 139 ASIRVYLREVRECQAKARGIPYKKKKKSNKQ 164
            ++R+YLREVR+ QAKARGIPY+KKK+   Q
Sbjct: 133 RAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

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BLAST of PI0025744.1 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 104/151 (68.87%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 19  SSNSPPTATTP------SRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLD 78
           +  +P  A  P      SRYESQKRRDWNTF QYL+N RPP+ L++C+  HV+EFLRYLD
Sbjct: 13  AGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAHVIEFLRYLD 72

Query: 79  QFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFAS 138
           QFGKTKVH  GC FYGQP PP PC CPL+QAWGSLDALIGRLRAAYEE+GG+PE+NPFA+
Sbjct: 73  QFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGGTPESNPFAA 132

Query: 139 ASIRVYLREVRECQAKARGIPYKKKKKSNKQ 164
            ++R+YLREVR+ QAKARGIPY+KKK+   Q
Sbjct: 133 RAVRIYLREVRDSQAKARGIPYEKKKRKRSQ 163

[Close]

BLAST of PI0025744.1 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-58
Identity = 107/165 (64.85%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 16  GEGSSNSPPT-----ATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRY 75
           G  SSNS P+       +PSRYE+QKRRDWNTFGQYL+N RPP++L+QC+  HVLEFLRY
Sbjct: 21  GSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRY 80

Query: 76  LDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPF 135
           LDQFGKTKVH   C F+G P PPAPC CPL+QAWGSLDAL+GRLRAA+EENGG PE+NPF
Sbjct: 81  LDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPF 140

Query: 136 ASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNL 176
           A+ ++R+YLREVRE QA+ARG+ Y+KKK+   QQ      +++ L
Sbjct: 141 AARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSSGL 185

[Close]

BLAST of PI0025744.1 vs. ExPASy TrEMBL
Match: A0A1S4DX19 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103490491 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 198/202 (98.02%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60
           MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60

Query: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120
           FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120

Query: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDS 180
           NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQ PTNNNNTNNLLIDDS
Sbjct: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQQPTNNNNTNNLLIDDS 180

Query: 181 TTTNNNISSSSSSSSIMHFSTP 203
           TTTNN   SSSSSSSIMHFSTP
Sbjct: 181 TTTNN--ISSSSSSSIMHFSTP 200

[Close]

BLAST of PI0025744.1 vs. ExPASy TrEMBL
Match: A0A5D3C0I4 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00410 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.3e-105
Identity = 198/202 (98.02%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60
           MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60

Query: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120
           FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120

Query: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDS 180
           NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQ PTNNNNTNNLLIDDS
Sbjct: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQQPTNNNNTNNLLIDDS 180

Query: 181 TTTNNNISSSSSSSSIMHFSTP 203
           TTTNN   SSSSSSSIMHFSTP
Sbjct: 181 TTTNN--ISSSSSSSIMHFSTP 200

[Close]

BLAST of PI0025744.1 vs. ExPASy TrEMBL
Match: A0A5A7V919 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005640 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.2e-102
Identity = 198/205 (96.59%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPT-ATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60
           MSGEGVVGDRSSKEYGEGSSNSPPT ATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTAATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60

Query: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120
           NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE
Sbjct: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120

Query: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPY--KKKKKSNKQQPPTNNNNTNNLLI 180
           ENGGSPETNPFASASIRVYLREVRECQAKARGIPY  KKKKKSNKQQ PTNNNNTNNLLI
Sbjct: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKKKSNKQQQPTNNNNTNNLLI 180

Query: 181 DDSTTTNNNISSSSSSSSIMHFSTP 203
           DDSTTTNN   SSSSSSSIMHFSTP
Sbjct: 181 DDSTTTNN--ISSSSSSSIMHFSTP 203

[Close]

BLAST of PI0025744.1 vs. ExPASy TrEMBL
Match: A0A0A0KFP9 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G236080 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 187/205 (91.22%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60
           MSGEGVVGD SSKEYGEGSS SPP ATTPSRYESQKRRDWNTFGQYLKNQRP VALSQCN
Sbjct: 1   MSGEGVVGDGSSKEYGEGSSKSPPRATTPSRYESQKRRDWNTFGQYLKNQRPAVALSQCN 60

Query: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120
           FNHVLEFLRYLDQFGKTKVHVQGCMFYG PEPP+PCTCPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGHPEPPSPCTCPLKQAWGSLDALIGRLRAAYEE 120

Query: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDS 180
           NGGSPETNPFA+ASIR+YLR+VRECQAKARGIPYKKKKK+NKQQ PT NNNTNNLLI DS
Sbjct: 121 NGGSPETNPFATASIRLYLRQVRECQAKARGIPYKKKKKTNKQQQPTINNNTNNLLIHDS 180

Query: 181 TTTNN---NISSSSSSSSIMHFSTP 203
           TTTNN   + SSSSSSSSIMHFSTP
Sbjct: 181 TTTNNISSSSSSSSSSSSIMHFSTP 205

[Close]

BLAST of PI0025744.1 vs. ExPASy TrEMBL
Match: A0A6J1I0C7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111469714 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 167/191 (87.43%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 13  KEYGEGSSNSPP-TATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYL 72
           KEYGEGSS+SPP T TTPSRYESQKRRDWNTFGQYLKNQRPPVAL+QCNFNHVLEFLRYL
Sbjct: 7   KEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALAQCNFNHVLEFLRYL 66

Query: 73  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFA 132
           DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE+GGSPETNPFA
Sbjct: 67  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEEHGGSPETNPFA 126

Query: 133 SASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSSS 192
           SASIRVYLREVRECQAKARGIPYKKKKKS+K     +N NTN+   DDSTT   N  SSS
Sbjct: 127 SASIRVYLREVRECQAKARGIPYKKKKKSSK----ASNTNTNH---DDSTT---NTCSSS 186

Query: 193 SSSSIMHFSTP 203
           SSS +MHFSTP
Sbjct: 187 SSSGMMHFSTP 187

[Close]

BLAST of PI0025744.1 vs. NCBI nr
Match: XP_008448236.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016900524.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >TYK04855.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 198/202 (98.02%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60
           MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60

Query: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120
           FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120

Query: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDS 180
           NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQ PTNNNNTNNLLIDDS
Sbjct: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQQPTNNNNTNNLLIDDS 180

Query: 181 TTTNNNISSSSSSSSIMHFSTP 203
           TTTNN   SSSSSSSIMHFSTP
Sbjct: 181 TTTNN--ISSSSSSSIMHFSTP 200

[Close]

BLAST of PI0025744.1 vs. NCBI nr
Match: KAA0062179.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 380.6 bits (976), Expect = 8.6e-102
Identity = 198/205 (96.59%), Postives = 198/205 (96.59%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPT-ATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60
           MSGEGVVGDRSSKEYGEGSSNSPPT ATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTAATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60

Query: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120
           NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE
Sbjct: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120

Query: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPY--KKKKKSNKQQPPTNNNNTNNLLI 180
           ENGGSPETNPFASASIRVYLREVRECQAKARGIPY  KKKKKSNKQQ PTNNNNTNNLLI
Sbjct: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKKKSNKQQQPTNNNNTNNLLI 180

Query: 181 DDSTTTNNNISSSSSSSSIMHFSTP 203
           DDSTTTNN   SSSSSSSIMHFSTP
Sbjct: 181 DDSTTTNN--ISSSSSSSIMHFSTP 203

[Close]

BLAST of PI0025744.1 vs. NCBI nr
Match: XP_004150559.2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN47252.1 hypothetical protein Csa_016992 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 187/205 (91.22%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCN 60
           MSGEGVVGD SSKEYGEGSS SPP ATTPSRYESQKRRDWNTFGQYLKNQRP VALSQCN
Sbjct: 1   MSGEGVVGDGSSKEYGEGSSKSPPRATTPSRYESQKRRDWNTFGQYLKNQRPAVALSQCN 60

Query: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE 120
           FNHVLEFLRYLDQFGKTKVHVQGCMFYG PEPP+PCTCPLKQAWGSLDALIGRLRAAYEE
Sbjct: 61  FNHVLEFLRYLDQFGKTKVHVQGCMFYGHPEPPSPCTCPLKQAWGSLDALIGRLRAAYEE 120

Query: 121 NGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDS 180
           NGGSPETNPFA+ASIR+YLR+VRECQAKARGIPYKKKKK+NKQQ PT NNNTNNLLI DS
Sbjct: 121 NGGSPETNPFATASIRLYLRQVRECQAKARGIPYKKKKKTNKQQQPTINNNTNNLLIHDS 180

Query: 181 TTTNN---NISSSSSSSSIMHFSTP 203
           TTTNN   + SSSSSSSSIMHFSTP
Sbjct: 181 TTTNNISSSSSSSSSSSSIMHFSTP 205

[Close]

BLAST of PI0025744.1 vs. NCBI nr
Match: XP_038900865.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 170/193 (88.08%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 11  SSKEYGEGSSNSPP-TATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLR 70
           SSKEYGEGSS+SPP TATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLR
Sbjct: 2   SSKEYGEGSSSSPPTTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLR 61

Query: 71  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNP 130
           YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPE+NP
Sbjct: 62  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPESNP 121

Query: 131 FASASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISS 190
           FASASIRVYLREVRECQAKARGIPYKKKKKSNK       NN  NLL+DDST       +
Sbjct: 122 FASASIRVYLREVRECQAKARGIPYKKKKKSNKA------NNNTNLLVDDST-------N 181

Query: 191 SSSSSSIMHFSTP 203
           ++SSSSIMHFSTP
Sbjct: 182 NTSSSSIMHFSTP 181

[Close]

BLAST of PI0025744.1 vs. NCBI nr
Match: XP_023534180.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 168/191 (87.96%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 13  KEYGEGSSNSPP-TATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYL 72
           KEYGEGSS+SPP T TTPSRYESQKRRDWNTFGQYLKNQRPPVAL+QCNFNHVLEFLRYL
Sbjct: 7   KEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALAQCNFNHVLEFLRYL 66

Query: 73  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFA 132
           DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE+GGSPETNPFA
Sbjct: 67  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEEHGGSPETNPFA 126

Query: 133 SASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSSS 192
           SASIRVYLREVRECQAKARGIPYKKKKKSNK     +N NTN+   DDSTT   N  SSS
Sbjct: 127 SASIRVYLREVRECQAKARGIPYKKKKKSNK----ASNTNTNH---DDSTT---NTCSSS 186

Query: 193 SSSSIMHFSTP 203
           SSS +MHFSTP
Sbjct: 187 SSSGMMHFSTP 187

[Close]

BLAST of PI0025744.1 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 257.7 bits (657), Expect = 7.9e-69
Identity = 132/178 (74.16%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 13  KEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLD 72
           K   E S + PP   TPSRYESQKRRDWNTFGQYLKNQRPPV +S C+ NHVL+FLRYLD
Sbjct: 9   KSLMESSGSEPP--VTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLD 68

Query: 73  QFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFAS 132
           QFGKTKVHV GCMFYGQPEPPAPCTCPL+QAWGSLDALIGRLRAAYEENGG PETNPFAS
Sbjct: 69  QFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFAS 128

Query: 133 ASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSS 191
            +IRVYLREVRECQAKARGIPYKKKKK  K  P            +DS++++++ S S
Sbjct: 129 GAIRVYLREVRECQAKARGIPYKKKKK-KKPTPEMGGGR------EDSSSSSSSFSFS 177

[Close]

BLAST of PI0025744.1 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 257.7 bits (657), Expect = 7.9e-69
Identity = 132/178 (74.16%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 13  KEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLD 72
           K   E S + PP   TPSRYESQKRRDWNTFGQYLKNQRPPV +S C+ NHVL+FLRYLD
Sbjct: 9   KSLMESSGSEPP--VTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLD 68

Query: 73  QFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFAS 132
           QFGKTKVHV GCMFYGQPEPPAPCTCPL+QAWGSLDALIGRLRAAYEENGG PETNPFAS
Sbjct: 69  QFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFAS 128

Query: 133 ASIRVYLREVRECQAKARGIPYKKKKKSNKQQPPTNNNNTNNLLIDDSTTTNNNISSS 191
            +IRVYLREVRECQAKARGIPYKKKKK  K  P            +DS++++++ S S
Sbjct: 129 GAIRVYLREVRECQAKARGIPYKKKKK-KKPTPEMGGGR------EDSSSSSSSFSFS 177

[Close]

BLAST of PI0025744.1 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-60
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 16  GEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFG 75
           G    +SPP   TPSRYESQKRRDWNTF QYLKN +PP+ALS+C+  HV+EFL+YLDQFG
Sbjct: 18  GPSFVSSPP--ATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFG 77

Query: 76  KTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASI 135
           KTKVHV  C ++G  +PP+PC+CPLKQAWGSLDALIGRLRAAYEENGG P++NPFA+ ++
Sbjct: 78  KTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAV 137

Query: 136 RVYLREVRECQAKARGIPYKKKKKSNKQQPPT 168
           R+YLREVRE QAKARGIPY+KKK   +++PPT
Sbjct: 138 RIYLREVRESQAKARGIPYEKKK---RKRPPT 164

[Close]

BLAST of PI0025744.1 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 225.3 bits (573), Expect = 4.3e-59
Identity = 113/166 (68.07%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 1   MSGEGVVGDRSSKEYGEGSSNS-----PPTATTP-SRYESQKRRDWNTFGQYLKNQRPPV 60
           MS +     +   ++   SSN      PP    P SRYESQKRRDWNTF QYLK+Q PP+
Sbjct: 1   MSSDRHTPTKDPPDHPSSSSNHHKQPLPPQPQQPLSRYESQKRRDWNTFVQYLKSQNPPL 60

Query: 61  ALSQCNFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRL 120
            +SQ ++ HVL FLRYLDQFGKTKVH Q C+F+GQP+PP PCTCPLKQAWGSLDALIGRL
Sbjct: 61  MMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQPDPPGPCTCPLKQAWGSLDALIGRL 120

Query: 121 RAAYEEN-GGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKK 160
           RAAYEE+ GGSP+TNPFA+ SIRV+LREVRE QAKARGIPY+KKK+
Sbjct: 121 RAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKARGIPYRKKKR 166

[Close]

BLAST of PI0025744.1 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 224.2 bits (570), Expect = 9.6e-59
Identity = 107/149 (71.81%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 19  SSNSPPTATTP-SRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKT 78
           SS+S  + T   SRYE+QKRRDWNTFGQYL+N RPP++LS+C+  HVLEFLRYLDQFGKT
Sbjct: 35  SSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKT 94

Query: 79  KVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRV 138
           KVH   C F+G P PPAPC CPL+QAWGSLDALIGRLRAA+EENGGSPETNPF + ++R+
Sbjct: 95  KVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRL 154

Query: 139 YLREVRECQAKARGIPYKKKKKSNKQQPP 167
           YLREVR+ QAKARGI Y+KKK+  K+ PP
Sbjct: 155 YLREVRDSQAKARGISYEKKKR--KRPPP 181

The following BLAST results are available for this feature:

BLAST of PI0025744.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	1.1e-67	74.16	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9LMK2	1.9e-59	71.05	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XED8	2.1e-58	68.87	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q941W1	2.1e-58	68.87	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1	[more]
A2XVI8	2.7e-58	64.85	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]

BLAST of PI0025744.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DX19	5.3e-105	98.02	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3C0I4	5.3e-105	98.02	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7V919	4.2e-102	96.59	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KFP9	6.2e-98	91.22	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G236080 PE=3 S...	[more]
A0A6J1I0C7	1.1e-83	87.43	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of PI0025744.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448236.1	1.1e-104	98.02	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_0...	[more]
KAA0062179.1	8.6e-102	96.59	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]	[more]
XP_004150559.2	1.3e-97	91.22	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN47252.1 hypoth...	[more]
XP_038900865.1	1.0e-86	88.08	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]	[more]
XP_023534180.1	6.2e-84	87.96	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0025744.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	7.9e-69	74.16	Protein of unknown function (DUF640)	[more]
AT2G42610.2	7.9e-69	74.16	Protein of unknown function (DUF640)	[more]
AT1G07090.1	1.3e-60	71.05	Protein of unknown function (DUF640)	[more]
AT4G18610.1	4.3e-59	68.07	Protein of unknown function (DUF640)	[more]
AT3G23290.2	9.6e-59	71.81	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 21..144 e-value: 5.3E-65 score: 217.3
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 31..158 score: 79.186714
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31165:SF10	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10	coord: 12..170
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 12..170

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0025744	PI0025744	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025744.1-exon	PI0025744.1-exon-chr11:14769745..14769843	exon
PI0025744.1-exon	PI0025744.1-exon-chr11:14773340..14774051	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025744.1-three_prime_utr	PI0025744.1-three_prime_utr-chr11:14769745..14769843	three_prime_UTR
PI0025744.1-three_prime_utr	PI0025744.1-three_prime_utr-chr11:14773340..14773410	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025744.1-cds	PI0025744.1-cds-chr11:14773411..14774019	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0025744.1-five_prime_utr	PI0025744.1-five_prime_utr-chr11:14774020..14774051	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0025744.1	PI0025744.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus