PI0024703.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0024703.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	chr05: 21372199 .. 21372940 (+)
Sequence length	660
RNA-Seq Expression	PI0024703.1
Synteny	PI0024703.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCCTTCCCTTTTTAATTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTTTTTACCTTTTTTTTTCTCTCAAATCACAAACAACCCTGTGTAAGCCTCTCTCATCTCTCACATGCATTCCTATAACTGTCAATTTTTTATCATTATTTTAACCTTTGTTTTTGGTTTTTAGAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGCTACCAACATATCCAAATTATTATTAATTACTATAATTAAGTACTCTTTTTTTTTCTTTCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTTTTTTTTCTTTTTTTTCTTTTTGGCATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGAATTGGCTGAAATTTTCACTTTAAA

mRNA sequence

ATTCCCCTTCCCTTTTTAATTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTTTTTACCTTTTTTTTTCTCTCAAATCACAAACAACCCTGTAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGCTACCAACATATCCAAATTATTATTAATTACTATAATTAAGTACTCTTTTTTTTTCTTTCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTTTTTTTTCTTTTTTTTCTTTTTGGCATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGAATTGGCTGAAATTTTCACTTTAAA

Coding sequence (CDS)

ATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAG

Protein sequence

MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA

Homology

[Close]

BLAST of PI0024703.1 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEI 60
           MS+R+++   ++ELR+NL+  P+ +S  S V +   S  +  +SC+S    E  +   E 
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVS---SETNQEENET 60

Query: 61  ITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQ 101
           IT SM+LVGCP C MYVML++   +CPKCK+ V LDF ++
Sbjct: 61  IT-SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

[Close]

BLAST of PI0024703.1 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 8   SEAEVELRVNLNRSPTTSSS-------SSSVSTFGGSEISVGNSCLSCEGEEHGERLEEI 67
           S    +L + LN SP TSS        S S +T   S  S  +SC+S E  +    +   
Sbjct: 2   SRRSPKLELKLNLSPPTSSQRRMVRSPSRSATT---SPTSPPSSCVSSEMNQDEPSVRYS 61

Query: 68  I---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
               T SM+LVGCP C MYVML+E   +CPKCK+ V LDF  +   +A
Sbjct: 62  TSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNA 106

[Close]

BLAST of PI0024703.1 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.7e-04
Identity = 29/94 (30.85%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 5  SRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEIITRS 64
          ++ + + + L + LN SP+  SS           ++  +S   C  E  G   E    +S
Sbjct: 2  NQEAASNLGLDLKLNISPSLDSSL----------LTESSSSSLCSEEAEGGGGE---AKS 61

Query: 65 MMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF 98
          M++VGCP C MY++ + E   +CP+C ++V LDF
Sbjct: 62 MVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDF 82

[Close]

BLAST of PI0024703.1 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 102/110 (92.73%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTF-----GGSEISVGNSCLSCEGEEHGE 60
           MSKRSRSSEAEVELRVNLNRSPT SSSSSSVSTF     G SEISVGNSCLSCEGEEHG 
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
           RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 110

[Close]

BLAST of PI0024703.1 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.7e-43
Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGE-EHGERLEE 60
           MSKRSRSSEAEVELRVNLN+SPTTSSSSSSVSTFGGS    G+SCLSCEGE +HG RLEE
Sbjct: 1   MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEE 60

Query: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHH 105
           IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 105

[Close]

BLAST of PI0024703.1 vs. ExPASy TrEMBL
Match: A0A2I4FHX4 (uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13
Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLE-- 60
           MSKR+   + E+EL ++  R   + + S +VS F  SEISV  SC+S E E+    L+  
Sbjct: 1   MSKRANGPKLELELNLSPPRREHSPAESLNVSNFSSSEISVEGSCVSSEPEDQPMTLQYS 60

Query: 61  --EIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 102
                 RSMMLVGCP C MYVML+E   +CPKCK+ V LDF K++
Sbjct: 61  PSNAEPRSMMLVGCPRCLMYVMLSEADPKCPKCKSTVLLDFLKEE 105

[Close]

BLAST of PI0024703.1 vs. ExPASy TrEMBL
Match: V7AGR8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G097300g PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.6e-12
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGG--SEISVGNSCLSCEGEEHGERLE 60
           M KR+RS   EV L ++  R+P +SS  SS S+     S  S+ +SC+SCE EE      
Sbjct: 1   MKKRARSPRLEVRLSLSPPRTPVSSSDPSSESSTSSQVSVQSLESSCVSCEVEE------ 60

Query: 61  EIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQ 102
              TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF K +
Sbjct: 61  ---TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLKNK 94

[Close]

BLAST of PI0024703.1 vs. ExPASy TrEMBL
Match: A0A1S3VZ34 (uncharacterized protein LOC106779913 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779913 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.9e-12
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSS--SSVSTFGGSEISV---GNSCLSCEGEEHGE 60
           MSKR+RS   EV L ++  R+ ++ SSS  SS S+   S++SV    +SC+SCE EE   
Sbjct: 1   MSKRARSPRLEVSLNLSPPRAASSVSSSDLSSDSSSSSSQVSVQSLESSCVSCEAEE--- 60

Query: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHH 105
                 TR+M+LVGCP C MYVML+E   +CPKCK+ V LDF   + ++
Sbjct: 61  ------TRAMLLVGCPRCLMYVMLSEVDPKCPKCKSTVLLDFLNNEENN 100

[Close]

BLAST of PI0024703.1 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 102/110 (92.73%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTF-----GGSEISVGNSCLSCEGEEHGE 60
           MSKRSRSSEAEVELRVNLNRSPT SSSSSSVSTF     G SEISVGNSCLSCEGEEHG 
Sbjct: 1   MSKRSRSSEAEVELRVNLNRSPTASSSSSSVSTFDGSGSGSSEISVGNSCLSCEGEEHGG 60

Query: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
           RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA
Sbjct: 61  RLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 110

[Close]

BLAST of PI0024703.1 vs. NCBI nr
Match: KAA0061725.1 (hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ96061.1 hypothetical protein E5676_scaffold182G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42
Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGE-EHGERLEE 60
           MSKRSRSSEAEVELRVNLN+SPTTSSSSSSVSTFGGS    G+SCLSCEGE +HG RLEE
Sbjct: 1   MSKRSRSSEAEVELRVNLNQSPTTSSSSSSVSTFGGSGSGSGDSCLSCEGEDQHGGRLEE 60

Query: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHH 105
           IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQP H
Sbjct: 61  IITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPQH 105

[Close]

BLAST of PI0024703.1 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29
Identity = 79/112 (70.54%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSE------ISVGNSCLSC-EGEEH 60
           MSKR RSSE EV LRV++NRSPTT    SS+S FGGSE      +SV +SCLS  +GE  
Sbjct: 1   MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEV- 60

Query: 61  GERLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
            E  E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFF QQ HHA
Sbjct: 61  -EEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKHHA 106

[Close]

BLAST of PI0024703.1 vs. NCBI nr
Match: KAG6605971.1 (hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29
Identity = 79/112 (70.54%), Postives = 87/112 (77.68%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSE------ISVGNSCLSC-EGEEH 60
           MSKR RSSE EV LRV++NRSPTT    SS+S FGGSE      +SV +SCLS  +GE  
Sbjct: 86  MSKRPRSSETEVALRVDMNRSPTT----SSMSMFGGSESGLGSDVSVESSCLSLWDGEV- 145

Query: 61  GERLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
            E  E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNNVFLDFF QQ HHA
Sbjct: 146 -EEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKHHA 191

[Close]

BLAST of PI0024703.1 vs. NCBI nr
Match: KAG7010337.1 (hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 9.6e-28
Identity = 82/113 (72.57%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNR--SPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLE 60
           MSKRSRSSE +VELRVNLNR  SP TSS S S S+   S+ISV NSCL  EG       E
Sbjct: 1   MSKRSRSSEPKVELRVNLNRLPSPATSSLSGSGSS---SDISVENSCLGWEGGVE----E 60

Query: 61  EIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFK------QQPHHA 106
           EIITRSMMLVGCPGCFMYVMLTEKSSQCPKC NNVFLDFFK      QQ HHA
Sbjct: 61  EIITRSMMLVGCPGCFMYVMLTEKSSQCPKCHNNVFLDFFKHQQQQQQQQHHA 106

[Close]

BLAST of PI0024703.1 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 1   MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEI 60
           MS+R+++   ++ELR+NL+  P+ +S  S V +   S  +  +SC+S    E  +   E 
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVS---SETNQEENET 60

Query: 61  ITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQ 101
           IT SM+LVGCP C MYVML++   +CPKCK+ V LDF ++
Sbjct: 61  IT-SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

[Close]

BLAST of PI0024703.1 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 7.3e-10
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 8   SEAEVELRVNLNRSPTTSSS-------SSSVSTFGGSEISVGNSCLSCEGEEHGERLEEI 67
           S    +L + LN SP TSS        S S +T   S  S  +SC+S E  +    +   
Sbjct: 2   SRRSPKLELKLNLSPPTSSQRRMVRSPSRSATT---SPTSPPSSCVSSEMNQDEPSVRYS 61

Query: 68  I---TRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA 106
               T SM+LVGCP C MYVML+E   +CPKCK+ V LDF  +   +A
Sbjct: 62  TSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNA 106

[Close]

BLAST of PI0024703.1 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05
Identity = 29/94 (30.85%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 5  SRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEIITRS 64
          ++ + + + L + LN SP+  SS           ++  +S   C  E  G   E    +S
Sbjct: 2  NQEAASNLGLDLKLNISPSLDSSL----------LTESSSSSLCSEEAEGGGGE---AKS 61

Query: 65 MMLVGCPGCFMYVMLT-EKSSQCPKCKNNVFLDF 98
          M++VGCP C MY++ + E   +CP+C ++V LDF
Sbjct: 62 MVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDF 82

The following BLAST results are available for this feature:

BLAST of PI0024703.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN4	4.9e-11	42.00	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FNI1	1.0e-08	39.81	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9FMS4	7.7e-04	30.85	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of PI0024703.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJX5	1.3e-46	92.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1	[more]
A0A5D3BBS4	8.7e-43	90.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2I4FHX4	1.9e-13	46.67	uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 P...	[more]
V7AGR8	4.6e-12	47.57	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G097300g PE=4 ...	[more]
A0A1S3VZ34	7.9e-12	45.87	uncharacterized protein LOC106779913 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]

BLAST of PI0024703.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48041.1	2.7e-46	92.73	hypothetical protein Csa_002820 [Cucumis sativus]	[more]
KAA0061725.1	1.8e-42	90.48	hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ960...	[more]
KAG7035922.1	8.6e-29	70.54	hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6605971.1	8.6e-29	70.54	hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7010337.1	9.6e-28	72.57	hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0024703.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11600.1	3.5e-12	42.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G06270.1	7.3e-10	39.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G22270.1	5.4e-05	30.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..105
None	No IPR available	PANTHER	PTHR33177:SF46	SUBFAMILY NOT NAMED	coord: 1..105

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0024703	PI0024703	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024703.1-five_prime_utr	PI0024703.1-five_prime_utr-chr05:21372199..21372294	five_prime_UTR
PI0024703.1-five_prime_utr	PI0024703.1-five_prime_utr-chr05:21372377..21372379	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024703.1-exon	PI0024703.1-exon-chr05:21372199..21372294	exon
PI0024703.1-exon	PI0024703.1-exon-chr05:21372377..21372940	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024703.1-cds	PI0024703.1-cds-chr05:21372380..21372697	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0024703.1-three_prime_utr	PI0024703.1-three_prime_utr-chr05:21372698..21372940	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0024703.1	PI0024703.1-protein	polypeptide