
PI0024703 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCCCTTCCCTTTTTAATTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTTTTTACCTTTTTTTTTCTCTCAAATCACAAACAACCCTGTGTAAGCCTCTCTCATCTCTCACATGCATTCCTATAACTGTCAATTTTTTATCATTATTTTAACCTTTGTTTTTGGTTTTTAGAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGCTACCAACATATCCAAATTATTATTAATTACTATAATTAAGTACTCTTTTTTTTTCTTTCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTTTTTTTTCTTTTTTTTCTTTTTGGCATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGAATTGGCTGAAATTTTCACTTTAAA ATTCCCCTTCCCTTTTTAATTCCCTTTTCCCTCTCCCTTCATTTCTCCACTCCTTTTTTTACCTTTTTTTTTCTCTCAAATCACAAACAACCCTGTAAAATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAGCTACCAACATATCCAAATTATTATTAATTACTATAATTAAGTACTCTTTTTTTTTCTTTCTTTCTTATTTCTCATCACATTTCTTAACTTTAATTAGTCAAGTTGTTTTTTTTTCTTTTTTTTCTTTTTGGCATTTTGGTTGGTGTGAGATCTTATTATATATAAATTAAAATGTTGTCCACCATGAAACCTAGGATGGATTATTAACTTTTTGTATGAATTGGCTGAAATTTTCACTTTAAA ATGAGCAAGAGATCGAGAAGTAGCGAGGCTGAGGTGGAGTTGAGAGTCAACTTGAACCGGTCTCCTACAACTTCATCTTCGTCTTCGTCGGTGAGCACGTTTGGTGGATCAGAAATATCGGTGGGGAATTCGTGCTTGTCATGTGAAGGAGAAGAGCATGGTGAGAGATTGGAAGAGATAATAACAAGATCAATGATGTTAGTGGGATGTCCAGGATGTTTCATGTATGTGATGCTGACAGAAAAGAGCTCTCAATGCCCAAAATGCAAGAACAACGTGTTTCTTGATTTCTTCAAGCAACAACCACATCATGCCTAG MSKRSRSSEAEVELRVNLNRSPTTSSSSSSVSTFGGSEISVGNSCLSCEGEEHGERLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQPHHA Homology
BLAST of PI0024703 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11 Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 7.7e-04 Identity = 29/94 (30.85%), Postives = 49/94 (52.13%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46 Identity = 102/110 (92.73%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.7e-43 Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy TrEMBL
Match: A0A2I4FHX4 (uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy TrEMBL
Match: V7AGR8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G097300g PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.6e-12 Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of PI0024703 vs. ExPASy TrEMBL
Match: A0A1S3VZ34 (uncharacterized protein LOC106779913 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779913 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.9e-12 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0
BLAST of PI0024703 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46 Identity = 102/110 (92.73%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of PI0024703 vs. NCBI nr
Match: KAA0061725.1 (hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ96061.1 hypothetical protein E5676_scaffold182G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42 Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of PI0024703 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29 Identity = 79/112 (70.54%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of PI0024703 vs. NCBI nr
Match: KAG6605971.1 (hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29 Identity = 79/112 (70.54%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of PI0024703 vs. NCBI nr
Match: KAG7010337.1 (hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133.7 bits (335), Expect = 9.6e-28 Identity = 82/113 (72.57%), Postives = 85/113 (75.22%), Query Frame = 0
BLAST of PI0024703 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12 Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of PI0024703 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 7.3e-10 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of PI0024703 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 5.4e-05 Identity = 29/94 (30.85%), Postives = 49/94 (52.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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