PI0019937.1 (mRNA) Melon (PI 482460) v1

Overview


Name	PI0019937.1
Type	mRNA
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Geranylgeranyl transferase type-2 subunit beta
Location	chr01: 3048697 .. 3049208 (-)
Sequence length	309
RNA-Seq Expression	PI0019937.1
Synteny	PI0019937.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTTCAGGTTTGCTACTCATGGTGGGTTCTTTCGAGCTTGATCGTGATTGACAGAGTTCCCTGGATTAATAAGGAAAAACTTATTAAGTTCATCTTAGACTGTCAGTTTGTTAAGCCAAATATTCTTTATCTAGATTGGATTTATGTACAAGGGATAATTATATTGCTTTTAACGAAGGTAACTTCCATAACATAACATAACTATTGAAAGTTTCAGGACACAGAAAATGGTGGTATTTCAGATGAAAAAGCGGATGATGCTGTTGATATCTACCACACATGCTTTGGAATAGCTGGTTATTACCGTCATATACTGCTAGCTTGTGTTAACTTAATATCTTACCTAAAGACATATGGTACGTGCTCCTAATGTTTACTTTTATTGATGCAGGCCTTTCACTTCTTGAATATCCCGGACTGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAATAGTATCATCCAATGCTATTGA

mRNA sequence

ATGTTTCTTCAGGTTTGCTACTCATGGTGGGTTCTTTCGAGCTTGATCGTGATTGACAGAGTTCCCTGGATTAATAAGGAAAAACTTATTAAGTTCATCTTAGACTGTCAGTTTGACACAGAAAATGGTGGTATTTCAGATGAAAAAGCGGATGATGCTGTTGATATCTACCACACATGCTTTGGAATAGCTGGCCTTTCACTTCTTGAATATCCCGGACTGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAATAGTATCATCCAATGCTATTGA

Coding sequence (CDS)

ATGTTTCTTCAGGTTTGCTACTCATGGTGGGTTCTTTCGAGCTTGATCGTGATTGACAGAGTTCCCTGGATTAATAAGGAAAAACTTATTAAGTTCATCTTAGACTGTCAGTTTGACACAGAAAATGGTGGTATTTCAGATGAAAAAGCGGATGATGCTGTTGATATCTACCACACATGCTTTGGAATAGCTGGCCTTTCACTTCTTGAATATCCCGGACTGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAATAGTATCATCCAATGCTATTGA

Protein sequence

MFLQVCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIAGLSLLEYPGLKAIDPAYALPVDVVNRIFLSKNSIIQCY

Homology

[Close]

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot
Match: Q84J75 (Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702 GN=RGTB1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.2e-35
Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI+K KL+KFILDCQ D +NGGISD + +DAVDI+HT FG+A
Sbjct: 233 VCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQ-DLDNGGISD-RPEDAVDIFHTYFGVA 292

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPVDVVNRI  +K
Sbjct: 293 GLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 321

[Close]

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot
Match: Q9LHL5 (Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702 GN=RGTB2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 5.5e-31
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI K KL+KFILD Q D +NGGISD +    VDI+HT FG+A
Sbjct: 229 VCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQ-DMDNGGISD-RPSYTVDIFHTYFGVA 288

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPV V+NRI  +K
Sbjct: 289 GLSLLEYPGVKTIDPAYALPVHVINRILFTK 317

[Close]

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot
Match: P20133 (Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BET2 PE=1 SV=3)

HSP 1 Score: 104.4 bits (259), Expect = 7.9e-22
Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSL +I R+ WIN EKL +FIL CQ D + GGISD + ++ VD++HT FG+A
Sbjct: 235 VCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQ-DEKKGGISD-RPENEVDVFHTVFGVA 294

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNR 91
           GLSL+ Y  L  IDP Y +P  V ++
Sbjct: 295 GLSLMGYDNLVPIDPIYCMPKSVTSK 318

[Close]

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot
Match: O93830 (Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans OX=5476 GN=BET2 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSL ++ R  W++ + L  FIL CQ D ENGG SD +  +  D+YHTCF IA
Sbjct: 250 VCYSWWVLSSLSILKRKNWVDLKILENFILTCQ-DLENGGFSD-RPGNQTDVYHTCFAIA 309

Query: 65  GLSLLEYP--GLKAIDPAYALPVDVVNR 91
           GLSL++Y   G K IDP Y +PV+V ++
Sbjct: 310 GLSLIDYKKYGFKEIDPVYCMPVEVTSK 335

[Close]

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot
Match: P46960 (Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ptb1 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-20
Identity = 41/88 (46.59%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 6   CYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIAG 65
           CY WW LS L +I ++ WI++ +LI F+L  Q D ++GG +D K +DA D+YHTCF +AG
Sbjct: 226 CYGWWDLSPLAIIGKLDWIDRNQLIDFLLGTQ-DADSGGFADRK-EDATDVYHTCFSLAG 285

Query: 66  LSLLEYPGLKAIDPAYALPVDVVNRIFL 94
           LSLL++P ++ +DP + LP++V  ++ L
Sbjct: 286 LSLLQFPNIEPVDPRFCLPLEVTQKMKL 311

[Close]

BLAST of PI0019937.1 vs. ExPASy TrEMBL
Match: A0A6J1DJK5 (Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111020651 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKLI+FILDCQ DTENGGISD + DDAVD+YHT FGIA
Sbjct: 225 VCYSWWVLSSLIMIDRVHWINKEKLIQFILDCQ-DTENGGISD-RPDDAVDVYHTYFGIA 284

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSKNSII 100
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K   I
Sbjct: 285 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGKKHAI 317

[Close]

BLAST of PI0019937.1 vs. ExPASy TrEMBL
Match: A0A6J1DHW7 (Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111020651 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKLI+FILDCQ DTENGGISD + DDAVD+YHT FGIA
Sbjct: 232 VCYSWWVLSSLIMIDRVHWINKEKLIQFILDCQ-DTENGGISD-RPDDAVDVYHTYFGIA 291

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSKNSII 100
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K   I
Sbjct: 292 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGKKHAI 324

[Close]

BLAST of PI0019937.1 vs. ExPASy TrEMBL
Match: W9QZF2 (Geranylgeranyl transferase type-2 subunit beta OS=Morus notabilis OX=981085 GN=L484_006432 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.3e-37
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ DTENGGISD + DDAVD+YHT FG+A
Sbjct: 284 VCYSWWVLSSLIIIDRVHWINKEKLVKFILDCQ-DTENGGISD-RPDDAVDVYHTYFGVA 343

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFL 94
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL
Sbjct: 344 GLSLLEYPGLKAIDPAYALPVDVVNRIFL 370

[Close]

BLAST of PI0019937.1 vs. ExPASy TrEMBL
Match: A0A7J6E4X9 (Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F8388_010648 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.0e-37
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ D ENGGISD + DDAVD+YHT FG+A
Sbjct: 225 VCYSWWVLSSLIMIDRVHWINKEKLVKFILDCQ-DVENGGISD-RPDDAVDVYHTYFGVA 284

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K
Sbjct: 285 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGK 313

[Close]

BLAST of PI0019937.1 vs. ExPASy TrEMBL
Match: A0A7J6FEP7 (Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F8388_019086 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.0e-37
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ D ENGGISD + DDAVD+YHT FG+A
Sbjct: 274 VCYSWWVLSSLIMIDRVHWINKEKLVKFILDCQ-DVENGGISD-RPDDAVDVYHTYFGVA 333

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K
Sbjct: 334 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGK 362

[Close]

BLAST of PI0019937.1 vs. NCBI nr
Match: XP_022153059.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 4.9e-37
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKLI+FILDCQ DTENGGISD + DDAVD+YHT FGIA
Sbjct: 232 VCYSWWVLSSLIMIDRVHWINKEKLIQFILDCQ-DTENGGISD-RPDDAVDVYHTYFGIA 291

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSKNSII 100
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K   I
Sbjct: 292 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGKKHAI 324

[Close]

BLAST of PI0019937.1 vs. NCBI nr
Match: XP_022153066.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia] >XP_022153074.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia] >XP_022153082.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 4.9e-37
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKLI+FILDCQ DTENGGISD + DDAVD+YHT FGIA
Sbjct: 225 VCYSWWVLSSLIMIDRVHWINKEKLIQFILDCQ-DTENGGISD-RPDDAVDVYHTYFGIA 284

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSKNSII 100
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL K   I
Sbjct: 285 GLSLLEYPGLKAIDPAYALPVDVVNRIFLGKKHAI 317

[Close]

BLAST of PI0019937.1 vs. NCBI nr
Match: XP_024020872.1 (geranylgeranyl transferase type-2 subunit beta 1 isoform X1 [Morus notabilis] >XP_024020873.1 geranylgeranyl transferase type-2 subunit beta 1 isoform X1 [Morus notabilis])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ DTENGGISD + DDAVD+YHT FG+A
Sbjct: 225 VCYSWWVLSSLIIIDRVHWINKEKLVKFILDCQ-DTENGGISD-RPDDAVDVYHTYFGVA 284

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFL 94
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL
Sbjct: 285 GLSLLEYPGLKAIDPAYALPVDVVNRIFL 311

[Close]

BLAST of PI0019937.1 vs. NCBI nr
Match: EXB61345.1 (Geranylgeranyl transferase type-2 subunit beta [Morus notabilis])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ DTENGGISD + DDAVD+YHT FG+A
Sbjct: 284 VCYSWWVLSSLIIIDRVHWINKEKLVKFILDCQ-DTENGGISD-RPDDAVDVYHTYFGVA 343

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFL 94
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL
Sbjct: 344 GLSLLEYPGLKAIDPAYALPVDVVNRIFL 370

[Close]

BLAST of PI0019937.1 vs. NCBI nr
Match: XP_024020874.1 (geranylgeranyl transferase type-2 subunit beta 1 isoform X2 [Morus notabilis])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WINKEKL+KFILDCQ DTENGGISD + DDAVD+YHT FG+A
Sbjct: 224 VCYSWWVLSSLIIIDRVHWINKEKLVKFILDCQ-DTENGGISD-RPDDAVDVYHTYFGVA 283

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFL 94
           GLSLLEYPGLKAIDPAYALPVDVVNRIFL
Sbjct: 284 GLSLLEYPGLKAIDPAYALPVDVVNRIFL 310

[Close]

BLAST of PI0019937.1 vs. TAIR 10
Match: AT5G12210.1 (RAB geranylgeranyl transferase beta subunit 1 )

HSP 1 Score: 147.9 bits (372), Expect = 4.4e-36
Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI+K KL+KFILDCQ D +NGGISD + +DAVDI+HT FG+A
Sbjct: 233 VCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQ-DLDNGGISD-RPEDAVDIFHTYFGVA 292

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPVDVVNRI  +K
Sbjct: 293 GLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 321

[Close]

BLAST of PI0019937.1 vs. TAIR 10
Match: AT5G12210.2 (RAB geranylgeranyl transferase beta subunit 1 )

HSP 1 Score: 147.9 bits (372), Expect = 4.4e-36
Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI+K KL+KFILDCQ D +NGGISD + +DAVDI+HT FG+A
Sbjct: 232 VCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQ-DLDNGGISD-RPEDAVDIFHTYFGVA 291

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPVDVVNRI  +K
Sbjct: 292 GLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 320

[Close]

BLAST of PI0019937.1 vs. TAIR 10
Match: AT3G12070.1 (RAB geranylgeranyl transferase beta subunit 2 )

HSP 1 Score: 134.8 bits (338), Expect = 3.9e-32
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI K KL+KFILD Q D +NGGISD +    VDI+HT FG+A
Sbjct: 229 VCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQ-DMDNGGISD-RPSYTVDIFHTYFGVA 288

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPV V+NRI  +K
Sbjct: 289 GLSLLEYPGVKTIDPAYALPVHVINRILFTK 317

[Close]

BLAST of PI0019937.1 vs. TAIR 10
Match: AT3G12070.2 (RAB geranylgeranyl transferase beta subunit 2 )

HSP 1 Score: 134.8 bits (338), Expect = 3.9e-32
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 5   VCYSWWVLSSLIVIDRVPWINKEKLIKFILDCQFDTENGGISDEKADDAVDIYHTCFGIA 64
           VCYSWWVLSSLI+IDRV WI K KL+KFILD Q D +NGGISD +    VDI+HT FG+A
Sbjct: 229 VCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQ-DMDNGGISD-RPSYTVDIFHTYFGVA 288

Query: 65  GLSLLEYPGLKAIDPAYALPVDVVNRIFLSK 96
           GLSLLEYPG+K IDPAYALPV V+NRI  +K
Sbjct: 289 GLSLLEYPGVKTIDPAYALPVHVINRILFTK 317

The following BLAST results are available for this feature:

BLAST of PI0019937.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84J75	6.2e-35	78.02	Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LHL5	5.5e-31	72.53	Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702...	[more]
P20133	7.9e-22	56.98	Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (stra...	[more]
O93830	1.5e-20	54.55	Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans OX=5476 GN=BE...	[more]
P46960	4.3e-20	46.59	Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe (str...	[more]

BLAST of PI0019937.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJK5	2.4e-37	86.32	Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1DHW7	2.4e-37	86.32	Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN...	[more]
W9QZF2	5.3e-37	88.76	Geranylgeranyl transferase type-2 subunit beta OS=Morus notabilis OX=981085 GN=L...	[more]
A0A7J6E4X9	9.0e-37	86.81	Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F83...	[more]
A0A7J6FEP7	9.0e-37	86.81	Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F83...	[more]

BLAST of PI0019937.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153059.1	4.9e-37	86.32	geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica char...	[more]
XP_022153066.1	4.9e-37	86.32	geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica char...	[more]
XP_024020872.1	1.1e-36	88.76	geranylgeranyl transferase type-2 subunit beta 1 isoform X1 [Morus notabilis] >X...	[more]
EXB61345.1	1.1e-36	88.76	Geranylgeranyl transferase type-2 subunit beta [Morus notabilis]	[more]
XP_024020874.1	1.1e-36	88.76	geranylgeranyl transferase type-2 subunit beta 1 isoform X2 [Morus notabilis]	[more]

BLAST of PI0019937.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12210.1	4.4e-36	78.02	RAB geranylgeranyl transferase beta subunit 1	[more]
AT5G12210.2	4.4e-36	78.02	RAB geranylgeranyl transferase beta subunit 1	[more]
AT3G12070.1	3.9e-32	72.53	RAB geranylgeranyl transferase beta subunit 2	[more]
AT3G12070.2	3.9e-32	72.53	RAB geranylgeranyl transferase beta subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001330	PFTB repeat	PFAM	PF00432	Prenyltrans	coord: 24..69 e-value: 2.1E-6 score: 27.4 coord: 4..18 e-value: 0.32 score: 10.8
None	No IPR available	GENE3D	1.50.10.20		coord: 3..101 e-value: 3.3E-29 score: 103.9
None	No IPR available	PANTHER	PTHR11774:SF15	GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA	coord: 4..94
IPR045089	Prenyltransferase subunit beta	PANTHER	PTHR11774	GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT	coord: 4..94
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 5..91

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
PI0019937	PI0019937	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019937.1-exon	PI0019937.1-exon-chr01:3048697..3048812	exon
PI0019937.1-exon	PI0019937.1-exon-chr01:3048908..3048986	exon
PI0019937.1-exon	PI0019937.1-exon-chr01:3049095..3049208	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
PI0019937.1-cds	PI0019937.1-cds-chr01:3048697..3048812	CDS
PI0019937.1-cds	PI0019937.1-cds-chr01:3048908..3048986	CDS
PI0019937.1-cds	PI0019937.1-cds-chr01:3049095..3049208	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
PI0019937.1	PI0019937.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018344	protein geranylgeranylation
cellular_component	GO:0005968	Rab-protein geranylgeranyltransferase complex
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008318	protein prenyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004663	Rab geranylgeranyltransferase activity