Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGACGGTGAACAACCGCAATTCGAACTTAACCCTGAAATTAAGCGAACCTTTCGGTGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAATAGAAGAAATGCCCCTCCGCCGTATGTTGCCCCAGAACCAAATGCTGCCTACATGGCACATGACTTGGATAGGCCGATTAGATCTTATGTGGCATCTAACTTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGCCGGACAATTCGGCGGTCACCCTGGAGAGGATCCACATGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATTTCACCTGAAAAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGACGAAGAGGTGGGCCAACGCTTTGGAAGATGGCGAGGTGGGAACATGGGACCAACTAATAGACAAATTTATGAAGAAAATTTTCCCACCTCACGAAAATGTCAGAAGAAGGAAGGAGCTTATGGGCTTCCAGTAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTTAAGAGGATGGTGAAAGCATGCCTCTAATGGCATTCCTGAATGCATACTGATGGAGGTTTTCTATTTTGGGCTAAACAAGGTTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTAAAGAGCTCCTACAACCAGATTAAGGCGACGCTGGATACAATGGCCAACAACAATGAAGAATGGGATGAAGATAATTTAGGCAATCGCCGAGGAGGACGATCAAGAGGTGATAAAGGCATGGATAAGAGTGTCGTGGTGGCGTTGCAATGA
mRNA sequence
ATGAGTGACGGTGAACAACCGCAATTCGAACTTAACCCTGAAATTAAGCGAACCTTTCGGTGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAATAGAAGAAATGCCCCTCCGCCGTATGTTGCCCCAGAACCAAATGCTGCCTACATGGCACATGACTTGGATAGGCCGATTAGATCTTATGTGGCATCTAACTTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGCCGGACAATTCGGCGGTCACCCTGGAGAGGATCCACATGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATTTCACCTGAAAAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGACGAAGAGGTGGGCCAACGCTTTGGAAGATGGCGAGGTTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTAAAGAGCTCCTACAACCAGATTAAGGCGACGCTGGATACAATGGCCAACAACAATGAAGAATGGGATGAAGATAATTTAGGCAATCGCCGAGGAGGACGATCAAGAGGTGATAAAGGCATGGATAAGAGTGTCGTGGTGGCGTTGCAATGA
Coding sequence (CDS)
ATGAGTGACGGTGAACAACCGCAATTCGAACTTAACCCTGAAATTAAGCGAACCTTTCGGTGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAATAGAAGAAATGCCCCTCCGCCGTATGTTGCCCCAGAACCAAATGCTGCCTACATGGCACATGACTTGGATAGGCCGATTAGATCTTATGTGGCATCTAACTTCTACAACTTTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGCCGGACAATTCGGCGGTCACCCTGGAGAGGATCCACATGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATTTCACCTGAAAAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGACGAAGAGGTGGGCCAACGCTTTGGAAGATGGCGAGGTTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTAAAGAGCTCCTACAACCAGATTAAGGCGACGCTGGATACAATGGCCAACAACAATGAAGAATGGGATGAAGATAATTTAGGCAATCGCCGAGGAGGACGATCAAGAGGTGATAAAGGCATGGATAAGAGTGTCGTGGTGGCGTTGCAATGA
Protein sequence
MSDGEQPQFELNPEIKRTFRCNRRRARQRQARRMENNRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVTQQTADAVFVGGMLKSSYNQIKATLDTMANNNEEWDEDNLGNRRGGRSRGDKGMDKSVVVALQ
Homology
BLAST of PI0018661.1 vs. ExPASy TrEMBL
Match:
A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 5.1e-32
Identity = 70/108 (64.81%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 37 NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVML 96
N + P A N Y+A D DRPIRSY + N Y+FNPGIAYP F EN RFEIK VML
Sbjct: 5 NNQGIPANQAAQGANPTYLADDRDRPIRSYASPNLYDFNPGIAYPTFSENTRFEIKLVML 64
Query: 97 QMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPL 145
Q+IQNAGQF HP +DPH++IR+FYSICASFHMPGIS E+LRF F L
Sbjct: 65 QIIQNAGQFRRHPRKDPHDYIRNFYSICASFHMPGISVEELRFTPFRL 112
BLAST of PI0018661.1 vs. ExPASy TrEMBL
Match:
A0A5A7TNS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00350 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 69/147 (46.94%), Postives = 93/147 (63.27%), Query Frame = 0
Query: 51 NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPG 110
N +AH+L+ PI Y + + Y FN GI YP FG NARF++KP ML MIQ QFGG+
Sbjct: 39 NPILIAHNLNNPINEYASPDLYVFNLGITYPAFG-NARFKMKPTMLHMIQTTVQFGGYLD 98
Query: 111 EDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVTQQTADAV 170
EDP +HI+S Y +C+SFH+P +S E L F TL+D+ K+W LE TQ D +
Sbjct: 99 EDPQDHIKSIYVMCSSFHLPCLSQEDLHITYFTFTLKDDIKKWVGTLEVARATQPNVDPM 158
Query: 171 F--VGGMLKSSYNQIKATLDTMANNNE 196
F G +++ +Y QIK TLD M+ N+E
Sbjct: 159 FTRAGELMRKTYTQIKDTLDIMSRNHE 184
BLAST of PI0018661.1 vs. ExPASy TrEMBL
Match:
A0A5A7UDN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00900 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.7e-27
Identity = 62/97 (63.92%), Postives = 73/97 (75.26%), Query Frame = 0
Query: 37 NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVML 96
N +N P E N AY+AHDLD+PI+SY + N Y+FNPGIAY FGEN FEIK +ML
Sbjct: 2 NNQNNPAYQNTQEQNPAYLAHDLDKPIKSYASPNLYDFNPGIAYLAFGENVGFEIKHLML 61
Query: 97 QMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS 134
M QNAGQFGGHP EDP++HIR+FY ICASF+M IS
Sbjct: 62 YMTQNAGQFGGHPHEDPYDHIRNFYFICASFNMLRIS 98
BLAST of PI0018661.1 vs. ExPASy TrEMBL
Match:
A0A5D3BVN1 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00390 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.9e-27
Identity = 64/102 (62.75%), Postives = 75/102 (73.53%), Query Frame = 0
Query: 34 MENNRRNAPPPYVAP--EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEI 93
M +N+ N P A + N +AH+LD PIR+Y + N Y+FN GIAY VFGENA FE+
Sbjct: 1 MASNKNNVVPLNSATQGQGNLTLIAHNLDLPIRAYTSLNLYDFNLGIAYLVFGENAHFEV 60
Query: 94 KPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS 134
KPVMLQMIQ AGQF G+ GEDPHEHI+SFYSICASFHM S
Sbjct: 61 KPVMLQMIQKAGQFDGYQGEDPHEHIKSFYSICASFHMSNFS 102
BLAST of PI0018661.1 vs. ExPASy TrEMBL
Match:
U5CUK7 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s03373p00007640 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21
Identity = 56/115 (48.70%), Postives = 65/115 (56.52%), Query Frame = 0
Query: 49 EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGH 108
E N +A D R IR Y A F N GI P + FE+KPVM QM+Q GQFGG
Sbjct: 11 EANPIALADDRARAIREYAAPMFNELNSGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGS 70
Query: 109 PGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT 164
P EDPH HIRSF + SF + G+S E LR LFP +LRD + W N L VT
Sbjct: 71 PTEDPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVT 124
BLAST of PI0018661.1 vs. NCBI nr
Match:
WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 163.3 bits (412), Expect = 2.4e-36
Identity = 82/180 (45.56%), Postives = 113/180 (62.78%), Query Frame = 0
Query: 1 MSDGEQPQFELNPEIKRTFRCNRRRARQRQARR-------MENNRRNAPPPYVAPEPNA- 60
MS+G+ P F+++PEI+RTFR R+ +QR++ + + N+ AP V NA
Sbjct: 2 MSEGDNPTFDIDPEIERTFRRRIRQIKQRRSNQTIEENMDAQYNQPQAPQAGVRQNANAQ 61
Query: 61 ---------AYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAG 120
+AHD +RP+R Y + N YNF PGI P F N RFE+KPVMLQM+Q AG
Sbjct: 62 EHANYDTNPIVLAHDRNRPMREYASPNLYNFAPGILQPTFEGNGRFEMKPVMLQMLQAAG 121
Query: 121 QFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT 164
QFGG GEDPH H++SF IC++F M G+ + +R LFP +LRDE ++WA + E GE+T
Sbjct: 122 QFGGATGEDPHAHLKSFLEICSAFPMAGVPQDSIRLTLFPFSLRDEARQWAYSFEPGEIT 181
BLAST of PI0018661.1 vs. NCBI nr
Match:
XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida])
HSP 1 Score: 150.6 bits (379), Expect = 1.6e-32
Identity = 79/168 (47.02%), Postives = 107/168 (63.69%), Query Frame = 0
Query: 1 MSDGEQPQFELNPEIKRTF--RCNRRRARQRQARRMENNRRNAPPPYVA---PEPNAAYM 60
MS P+FE NPEI TF R ++ RA +R+ +NN AP P + ++
Sbjct: 1 MSTRTDPEFEANPEIDHTFRTRAHQNRAWRRRINMADNNNNEAPEGNQGVNRPVQDPVFL 60
Query: 61 AHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHE 120
A D + PIR+Y A N Y+F+PGI+ P+ ENARFEIKPVM+QMIQN QF E+PH
Sbjct: 61 AADHNIPIRNYAAPNLYDFSPGISRPIVEENARFEIKPVMVQMIQNMRQFESLQCENPHA 120
Query: 121 HIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT 164
H+ F +C++F +PGI+P +R LFP TLRD+ KRWA++LE E+T
Sbjct: 121 HLTIFVEMCSTFSIPGITPVGIRLYLFPYTLRDKAKRWAHSLEANEIT 168
BLAST of PI0018661.1 vs. NCBI nr
Match:
KAA0062403.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK26578.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 147.9 bits (372), Expect = 1.0e-31
Identity = 70/108 (64.81%), Postives = 80/108 (74.07%), Query Frame = 0
Query: 37 NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVML 96
N + P A N Y+A D DRPIRSY + N Y+FNPGIAYP F EN RFEIK VML
Sbjct: 5 NNQGIPANQAAQGANPTYLADDRDRPIRSYASPNLYDFNPGIAYPTFSENTRFEIKLVML 64
Query: 97 QMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPL 145
Q+IQNAGQF HP +DPH++IR+FYSICASFHMPGIS E+LRF F L
Sbjct: 65 QIIQNAGQFRRHPRKDPHDYIRNFYSICASFHMPGISVEELRFTPFRL 112
BLAST of PI0018661.1 vs. NCBI nr
Match:
KAA0045193.1 (hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa] >TYK27359.1 hypothetical protein E5676_scaffold325G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 146.0 bits (367), Expect = 4.0e-31
Identity = 69/147 (46.94%), Postives = 93/147 (63.27%), Query Frame = 0
Query: 51 NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPG 110
N +AH+L+ PI Y + + Y FN GI YP FG NARF++KP ML MIQ QFGG+
Sbjct: 39 NPILIAHNLNNPINEYASPDLYVFNLGITYPAFG-NARFKMKPTMLHMIQTTVQFGGYLD 98
Query: 111 EDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVTQQTADAV 170
EDP +HI+S Y +C+SFH+P +S E L F TL+D+ K+W LE TQ D +
Sbjct: 99 EDPQDHIKSIYVMCSSFHLPCLSQEDLHITYFTFTLKDDIKKWVGTLEVARATQPNVDPM 158
Query: 171 F--VGGMLKSSYNQIKATLDTMANNNE 196
F G +++ +Y QIK TLD M+ N+E
Sbjct: 159 FTRAGELMRKTYTQIKDTLDIMSRNHE 184
BLAST of PI0018661.1 vs. NCBI nr
Match:
XP_038874908.1 (uncharacterized protein LOC120067411 [Benincasa hispida])
HSP 1 Score: 141.7 bits (356), Expect = 7.5e-30
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0
Query: 51 NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPG 110
N MA+ RP+R Y + Y+F+P I YP + RFE+K VMLQM+Q AGQF G G
Sbjct: 20 NPIIMANSSTRPMREYASPGLYDFSPTIIYPT-PDGTRFEMKSVMLQMLQTAGQFRGARG 79
Query: 111 EDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVTQQTADAV 170
EDPH H++ F C SF +PGI+PE +R +LFP +LRD+ K+W + +Q ADA
Sbjct: 80 EDPHAHMKCFLETCNSFVIPGITPEAIRLSLFPYSLRDDAKQWMCIRDRNRASQMVADAA 139
Query: 171 FVGGMLKSSYNQIKATLDTMANNNEEWDEDNLGNR 206
G ++ SY + K LD +A +N EW +D R
Sbjct: 140 AAGSIMDKSYTEAKEILDHIAKHNMEWVDDTYDAR 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V2U7 | 5.1e-32 | 64.81 | Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=... | [more] |
A0A5A7TNS8 | 1.9e-31 | 46.94 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UDN8 | 1.7e-27 | 63.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BVN1 | 4.9e-27 | 62.75 | Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=... | [more] |
U5CUK7 | 4.0e-21 | 48.70 | Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s03373p00007640... | [more] |
Match Name | E-value | Identity | Description | |
WP_217833177.1 | 2.4e-36 | 45.56 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
XP_038887458.1 | 1.6e-32 | 47.02 | uncharacterized protein LOC120077591 [Benincasa hispida] | [more] |
KAA0062403.1 | 1.0e-31 | 64.81 | putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK... | [more] |
KAA0045193.1 | 4.0e-31 | 46.94 | hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa] >TYK2735... | [more] |
XP_038874908.1 | 7.5e-30 | 43.87 | uncharacterized protein LOC120067411 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |