Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATACTGCAGCAAAGAGTGGCAAGAAAGGAAAATGTAACTTTGCAATGAACTATACTAATTCCTCTTCTTCCAACCTGTTAGTGTATAAACAGTAAACATGAATCTAAAACTGTCAACTTCAAGACCAAAAGGCTTGACTAAATAAAGATATATCCATAAGAACATTTTCTTTCATGAGAATATAATAATACTAACAATTGTTTCCTAAGCAAGAATCCCTGGACTGGGCAAGCGAGATTTGCCTTCAAGTAGCAGTAATCTATCAGAATTACAGATAGTCGAGATTTGCACAGATATGCTAGTAGTAACATTGGATGATCAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCAGAGTCAGAGATGTTGCAACTTCTCTAA mRNA sequence ATGGATACTGCAGCAAAGAGTGGCAAGAAAGGAAAATGTAACTTTGCAATGAACTATACTAATTCCTCTTCTTCCAACCTAATCCCTGGACTGGGCAAGCGAGATTTGCCTTCAAGTAGCAGTAATCTATCAGAATTACAGATAGTCGAGATTTGCACAGATATGCTAGTAGTAACATTGGATGATCAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCAGAGTCAGAGATGTTGCAACTTCTCTAA Coding sequence (CDS) ATGGATACTGCAGCAAAGAGTGGCAAGAAAGGAAAATGTAACTTTGCAATGAACTATACTAATTCCTCTTCTTCCAACCTAATCCCTGGACTGGGCAAGCGAGATTTGCCTTCAAGTAGCAGTAATCTATCAGAATTACAGATAGTCGAGATTTGCACAGATATGCTAGTAGTAACATTGGATGATCAAGAAATGTGCTTGAAGGATCAGTATACACAAGAGGGAAAAACAACCTCAGAGTCAGAGATGTTGCAACTTCTCTAA Protein sequence MDTAAKSGKKGKCNFAMNYTNSSSSNLIPGLGKRDLPSSSSNLSELQIVEICTDMLVVTLDDQEMCLKDQYTQEGKTTSESEMLQLL
Homology
BLAST of PI0008383.1 vs. ExPASy TrEMBL
Match: A0A0A0K9J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21 Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 0 Query: 10 KGKCNFAMNYTNSSSSNLI-----PGLGKRDLPSSSSN-LSELQIVEICTDMLVVTLDDQ 69 +GKCNFA+NYTNSSSSNL P G+ + +SSS+ LSELQIVEICTDML +T DD+ Sbjct: 12 QGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEICTDMLEITWDDE 71
Query: 70 EMCLKDQYTQEGKTTSESEMLQLL 88 EMCLKDQYTQEGKTTSESEMLQLL Sbjct: 72 EMCLKDQYTQEGKTTSESEMLQLL 95
BLAST of PI0008383.1 vs. NCBI nr
Match: KGN46143.1 (hypothetical protein Csa_005463 [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 5.5e-21 Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 0 Query: 10 KGKCNFAMNYTNSSSSNLI-----PGLGKRDLPSSSSN-LSELQIVEICTDMLVVTLDDQ 69 +GKCNFA+NYTNSSSSNL P G+ + +SSS+ LSELQIVEICTDML +T DD+ Sbjct: 12 QGKCNFALNYTNSSSSNLCFLSNNPWSGRANSSASSSSILSELQIVEICTDMLEITWDDE 71
Query: 70 EMCLKDQYTQEGKTTSESEMLQLL 88 EMCLKDQYTQEGKTTSESEMLQLL Sbjct: 72 EMCLKDQYTQEGKTTSESEMLQLL 95
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K9J1 | 2.7e-21 | 73.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G057090 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN46143.1 | 5.5e-21 | 73.81 | hypothetical protein Csa_005463 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 21..40 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
PI0008383 | PI0008383 | gene |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0008383.1-exon | PI0008383.1-exon-chr03:8803431..8803510 | exon |
PI0008383.1-exon | PI0008383.1-exon-chr03:8803648..8803831 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
PI0008383.1-cds | PI0008383.1-cds-chr03:8803431..8803510 | CDS |
PI0008383.1-cds | PI0008383.1-cds-chr03:8803648..8803831 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
PI0008383.1 | PI0008383.1-protein | polypeptide |
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