Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGTTTAGCGGCGGAAATTTAGAAGTGTGATGGAGTTGAGGGGGAGGAGGGATTTGTGAAGGCGAGGCGGTGGAGTGGAGATTATTGGGAGGAAGATTTGTTGAAGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG mRNA sequence ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG Coding sequence (CDS) ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG Protein sequence MEPSPAVDGPGGGRAIASGAEGGDLRFGIWDWLSEPEPEMAVIIEESEVQ
Homology
BLAST of PI0004736.1 vs. ExPASy TrEMBL
Match: A0A0A0L9B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.3e-16 Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 1 MEPSPAVDGPGGGRAIASGAEGG-------DLRFGIWDWLSEPEPEMAVIIEESEVQ 51
MEPSPAVDGPGGGRAIASGAEGG D RFGIWDWLSEP PEMAVIIEESEVQ
Sbjct: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57
BLAST of PI0004736.1 vs. NCBI nr
Match: KGN58510.1 (hypothetical protein Csa_001074 [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16 Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0
Query: 1 MEPSPAVDGPGGGRAIASGAEGG-------DLRFGIWDWLSEPEPEMAVIIEESEVQ 51
MEPSPAVDGPGGGRAIASGAEGG D RFGIWDWLSEP PEMAVIIEESEVQ
Sbjct: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L9B8 | 3.3e-16 | 84.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN58510.1 | 6.8e-16 | 84.21 | hypothetical protein Csa_001074 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..21 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| PI0004736 | PI0004736 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0004736.1-exon | PI0004736.1-exon-chr04:11413491..11413574 | exon |
| PI0004736.1-exon | PI0004736.1-exon-chr04:11413679..11413747 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0004736.1-cds | PI0004736.1-cds-chr04:11413491..11413574 | CDS |
| PI0004736.1-cds | PI0004736.1-cds-chr04:11413679..11413747 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| PI0004736.1 | PI0004736.1-protein | polypeptide |
|
