PI0004736 (gene) Melon (PI 482460) v1

Overview
NamePI0004736
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 11413491 .. 11413747 (-)
RNA-Seq ExpressionPI0004736
SyntenyPI0004736
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGTTTAGCGGCGGAAATTTAGAAGTGTGATGGAGTTGAGGGGGAGGAGGGATTTGTGAAGGCGAGGCGGTGGAGTGGAGATTATTGGGAGGAAGATTTGTTGAAGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

mRNA sequence

ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

Coding sequence (CDS)

ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGAGCGGAAGGGGGGGATTTGAGATTTGGGATATGGGATTGGTTGTCGGAGCCGGAGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG

Protein sequence

MEPSPAVDGPGGGRAIASGAEGGDLRFGIWDWLSEPEPEMAVIIEESEVQ
Homology
[Close]
BLAST of PI0004736 vs. ExPASy TrEMBL
Match: A0A0A0L9B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-16
Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MEPSPAVDGPGGGRAIASGAEGG-------DLRFGIWDWLSEPEPEMAVIIEESEVQ 51
          MEPSPAVDGPGGGRAIASGAEGG       D RFGIWDWLSEP PEMAVIIEESEVQ
Sbjct: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57

[Close]
BLAST of PI0004736 vs. NCBI nr
Match: KGN58510.1 (hypothetical protein Csa_001074 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 6.8e-16
Identity = 48/57 (84.21%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1  MEPSPAVDGPGGGRAIASGAEGG-------DLRFGIWDWLSEPEPEMAVIIEESEVQ 51
          MEPSPAVDGPGGGRAIASGAEGG       D RFGIWDWLSEP PEMAVIIEESEVQ
Sbjct: 1  MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57

The following BLAST results are available for this feature:
BLAST of PI0004736 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004736 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9B83.3e-1684.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1[more]
BLAST of PI0004736 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58510.16.8e-1684.21hypothetical protein Csa_001074 [Cucumis sativus][more]
BLAST of PI0004736 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004736.1PI0004736.1mRNA