PI0002737.1 (mRNA) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTCAGGCAATACCTCTGTCCCTACTTCCACTCTCTTCTTACTATCCAATATTTGCAATCGTGTACCTATTCGTTTAGATTCCACCAATTACATTCTCTGGAAGTATCAAGTCTCCTCTATTCTTAAAGCACACTCTCTTTTTGGCCACCTTGATGAATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCTCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACTCTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCAGATCCAACATTCTTGATTTAAGGTTTGCCCTTTATACCATAAAAAAAATCTTCTTCTGA ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTCAGGCAATACCTCTGTCCCTACTTCCACTCTCTTCTTACTATCCAATATTTGCAATCGTGTACCTATTCGTTTAGATTCCACCAATTACATTCTCTGGAAGTATCAAGTCTCCTCTATTCTTAAAGCACACTCTCTTTTTGGCCACCTTGATGAATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCTCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACTCTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCAGATCCAACATTCTTGATTTAAGGTTTGCCCTTTATACCATAAAAAAAATCTTCTTCTGA ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTCAGGCAATACCTCTGTCCCTACTTCCACTCTCTTCTTACTATCCAATATTTGCAATCGTGTACCTATTCGTTTAGATTCCACCAATTACATTCTCTGGAAGTATCAAGTCTCCTCTATTCTTAAAGCACACTCTCTTTTTGGCCACCTTGATGAATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCTCTGATGCCCACCCGGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACTCTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACGATACTCCTCCAACACCAGATCCAACATTCTTGATTTAAGGTTTGCCCTTTATACCATAAAAAAAATCTTCTTCTGA MAASSSESDLTPVIPTSTESSHSGNTSVPTSTLFLLSNICNRVPIRLDSTNYILWKYQVSSILKAHSLFGHLDESLPCPSKHLASPTSDAHPEINPEYLQWLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKRYSSNTRSNILDLRFALYTIKKIFF Homology
BLAST of PI0002737.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.9e-11 Identity = 35/109 (32.11%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09 Identity = 33/111 (29.73%), Postives = 60/111 (54.05%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy TrEMBL
Match: A0A5A7UZE5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00300 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 3.0e-58 Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy TrEMBL
Match: A0A5D3CH60 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00480 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 5.9e-54 Identity = 113/137 (82.48%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy TrEMBL
Match: A0A5A7T8B0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00680 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53 Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy TrEMBL
Match: A0A1S4E4S1 (uncharacterized protein LOC107991968 OS=Cucumis melo OX=3656 GN=LOC107991968 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53 Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 0
BLAST of PI0002737.1 vs. ExPASy TrEMBL
Match: A0A5A7VGG0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00280 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of PI0002737.1 vs. NCBI nr
Match: KAA0061282.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09861.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 234.6 bits (597), Expect = 6.2e-58 Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of PI0002737.1 vs. NCBI nr
Match: TYK11141.1 (putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53 Identity = 113/137 (82.48%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of PI0002737.1 vs. NCBI nr
Match: XP_016902970.1 (PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo] >KAA0039118.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK26994.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 219.2 bits (557), Expect = 2.7e-53 Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 0
BLAST of PI0002737.1 vs. NCBI nr
Match: KAA0067173.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 199.5 bits (506), Expect = 2.2e-47 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of PI0002737.1 vs. NCBI nr
Match: TYJ97594.1 (putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46 Identity = 106/139 (76.26%), Postives = 114/139 (82.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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