Moc11g08210.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g08210.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	replication factor C subunit 4
Location	chr11: 5837922 .. 5842167 (+)
Sequence length	1011
RNA-Seq Expression	Moc11g08210.1
Synteny	Moc11g08210.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATAGTACGTTTCACTTCTCATTCTTTCGTTTCACTAATTTCTCATAATATCATTCGTACTGTCAACCATGGGGCATTTTTGACAGTCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTGTACTTCATCGACTTCTCTTCTTTTTTCGTAGTAGTGATCGTATTTATCTTCTTAATCCAGCGTTATTTTTCTTCTCGATTGTTGGTTGAACAGTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGGTCCTTTTCTGCTCATATCTGTTTTTATAAAGTTGTATTTATGCGTGCCTCTTCAATTGTTATTGCTTTTTAGGAGGTTGTGAATTGATGTTTAGTAGTTCAGAATCCTTTCTAAGAAATATCTTGGATTCTCTTCATAGATGGGTTTGTAGGTTTCTAATGCGCAGTTCGCATGCTCGTATATATGTACAAAGGTTATCGGTTAAGGTTTTTGTCTGAGTTGTATATTCATGAGCTTTCTCAACTGCTGAAGTTATTAATATATCATGGCCTCACTATCTTGATGGTTGAATACTAGTTGTCAAGACTTGGGGAGGTTTTTGCTCAAAGGGACCTGTGATTTGCTTGTTTGAGAATTAAACTTCAACCTAATTCGATTTATAAAATGCCCAGACCATTGTTTTGCTGCATAACACATTAAGGTGCTATTTGAATGTCTTTTTAAGTTCTTATCTGATATAAAAAATTTATCTGTAGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGTAACTTTCTTAACCTTAGCTACCATTTTCACAACATTTCTGTTATGAACTTCTCACTTATTTATTTATTTTAATTATTTTAGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGGTGTGATCATAGTCTAGATGCAATCTATTTAATTTATTAGAGTTTCTACGAGTTTAGTTTTTTCCCTGATACTGAACATTATGTAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGTGAAGCTTAGCTTCCTTTATAGTGTTTAAATATCTCTTTTTATTGTTGCTGTTGATTTACTTTTTGTATTTGTGCTTTGGATATTCACGACATGCTTCATCCTTTTATGGAGTAAATTCATGATCATAATTGATAATTCATAAGATGTTTGCATTTTTGGCCACTTATGAAGGAGCAACGAGTGAGTCGGTAGTAATTTGCTTATGGTAAAATCATTGAGACAGTGTAAGAGGGTATGTGGTTGGAATCTCTGAGAACAATAGTAGATGACTACAACCTTGGGGCGGGCACGGGAGCCCGTGGGTATAGGGGAGCAAAGTTCAAGGAAAAAAAAAAGTAGATGGCCACAATAGTTTTTAACTAAATTGCAATTTAATTGTCTTAAAAGTTAAATTCACAATGAGTATGGGAGGTGAATTTCTGAAAACACGTGGGTGAGCACAATAATATTTAGCTAGTTGCAACTTGATTTCTATGAATATTTTGATATTCACAATCTTTTGTATTAATGTATATATTTTGGCAACATTTGTACAATGTATGGAAATATTGCCTTGTCTTTCTCATGCATCCTAAATGGCCCGTACTCATATTTTTGGAATAGAGGAAAGTGATTCCTCAATTGTTTCTGGTTTCTACAATGGTCCATTTCTACTTGGCCTTGAATTTGGTGAAGCTAAACCATCATCTTAGTGCTTTGTCTATCCGTGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGTTTGCTCATAGTTACTTAGCATTACAAAGTATGGTTTGAAGTAAGTTATTGGCATGACCAATGTGTTCTGAACTTACAATCTATGTAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGGTACGATTTAGTCTGCAGCATTGCACTTATTTCAGTCAACGACTTAGCTTTTGCTATCCCATGCTGAACATGCATGCATTTGGAGCTTGGATAATTAAGAGGAGACTAATCAATCGTTCTATTCTACTAGAATAAGTCGAAGTTCTATTTTAGTTTGGGGCTACATTAAACTAACCTGATTGCATGCCCTCTACGTGGAGAACAATTTACCTTTCCTGTTATTTTTGGTGATCATTTGGGATGAGAAATGTTGACCATTTGTTGCTATTGAATAGTAGAATTTATTTCCTATATAACTTACTGTACTTGTAAAATTGGAGTACCGAAAAAAATTGCATTAGGGTAGACTTCACACCAACTACGTTTGGAGTTGTACATAATGTCTAACTTCTATATCTCTCGTAACGGAAATACTTGAGGATCGGATGAGCTTCTGTTGTGTTAATAAGTAGGATCAAATTATGAGAGAATTAGATGAATAATAAATCCAATCACTCATTGAATATTGTCAACAAGCTCAATTGTTGTAGTTATTTGTATTAGAAGTCAGCTTAGTAAGTTAAGTTACTTTTCAGGCACTCTTGGTCAGTTGACTCAATTTATAGTTGAAAATAGAATAGTTTCTATCTTTTCTAACTGCTTTTTACACTTCTTTAATAAACATTCTCATCCTTCAGCTAGCAACTGAATGTTGATATTCCTAATGGAGATTCTTGTTTTTTTCTCTCCAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTAGTTATGCAATTTTTTTATTATTTTATTATTTATTATTTTTTGAAGTCATAGCATCCTTAGAATACAAAGAAAGTAAATAGTTAAAAATGGTTATGCTTCACTTTGCTCCTTTGATGAATGTTGATCCTGACCCGTAAACAAAAAGTTTGTATATGCCTTGCCCTTATGTCCATGGCTTTCAACTTCTTTCAGAACCCAATTCCTTGGATGGCTAATGGTCCTTTCTGAAACTGTGGCATTGGAGAATGATCCTAAGTACTATTTGTGATTTTTTTTTTCTTTTGGATGGTTGGATTTTTAACTAGATAATGTTTCATATTGTAGGTTTTGTATGAGTTTTGAGTGTTCCATATTCTGCCATCAATTATTTAACTTATGCTAGATTTTTCGGCTGTTTGGCAATTTAATAGTTGATGAATTCTCTCATCTTGTTCTCAAAAGCATGCTTAATAATTTGCTTGCAACATATTTCGCACGGAATTGTCTTATATTTTGAGGACTCGTAGTATCTAACTTTTTAACACATGCAGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGGTTTATTCTTTTTCAATCTATATTGTGTTATTTTGTTCTTAAGGGTGGACGGAGATACGTAATACATTAATGTTTCCCTCAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGGTTACTCTATCCATTTCCATGTTGAATTTCGTATTTTCTGTTCCAAAATTCATGTGATTTTTGCATTAGCTATGCTCAGATTAGCAATAGAAGTTTGTTTTTTGTTCTTTTCGAAGTTGCATTAAATAACTTATACGTCAAATATTTTTGTTTGGTTTGTTTTCCGTTTTAGTTATAAAATACGTGGATCTAAATTGAATTTTACCCCGGTAATTTTCTTGAGTGACATCTAGATCATGCAAACAAACATTTTTGTCGTGCAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

mRNA sequence

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

Coding sequence (CDS)

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

Protein sequence

MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP

Homology

[Close]

BLAST of Moc11g08210.1 vs. NCBI nr
Match: XP_022134048.1 (replication factor C subunit 4 [Momordica charantia])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 336

[Close]

BLAST of Moc11g08210.1 vs. NCBI nr
Match: XP_038897028.1 (replication factor C subunit 4 [Benincasa hispida])

HSP 1 Score: 626.3 bits (1614), Expect = 1.5e-175
Identity = 319/335 (95.22%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL+SVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVSVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ALF+ACKSGNFD+ANKEVNNV AEGYPVAQMLSQIFEVVVE N LQDEQKARIC
Sbjct: 241 PREVVDALFSACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVVEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA  SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQ 335

[Close]

BLAST of Moc11g08210.1 vs. NCBI nr
Match: XP_023523758.1 (replication factor C subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 621.7 bits (1602), Expect = 3.7e-174
Identity = 319/336 (94.94%), Postives = 327/336 (97.32%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE+VMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEKVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210.1 vs. NCBI nr
Match: XP_022981026.1 (replication factor C subunit 4 [Cucurbita maxima])

HSP 1 Score: 620.9 bits (1600), Expect = 6.3e-174
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210.1 vs. NCBI nr
Match: KAG6608033.1 (Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot
Match: Q93ZX1 (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 4.3e-157
Identity = 280/335 (83.58%), Postives = 305/335 (91.04%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot
Match: Q9FXM3 (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 4.7e-156
Identity = 277/334 (82.93%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL  SSQPWVEKYRP+QVKDVAHQ+EVVRVLT TL+T+  PHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIA+QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  R+GGYPCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RKGGYPCPPYKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLD +AL+TLS+IS GDLRRAITYLQSAARLFGSSISS DLISVSG I
Sbjct: 181 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           P +VV +L A+CKSG FD+ANKEVNN+ A+GYPV+Q++SQ  +V+V A+ + DEQKARIC
Sbjct: 241 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           KKL EADKCLVDGADEYLQLLDV S+T++A   M
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333

[Close]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot
Match: P35249 (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-101
Identity = 187/321 (58.26%), Postives = 243/321 (75.70%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA Q+EVV VL  +LE +  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I  +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKK 218

Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLF-GSSISSKDLISVSGVIPREVVNAL 249
           E + +  E ++ L  +S+GDLR+AIT+LQSA RL  G  I+ K +  ++GVIP E ++ +
Sbjct: 219 ENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGV 278

Query: 250 FAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADK 309
           FAAC+SG+FD     V ++  EG+   Q+++Q+ +VVVE N+L D+QK+ I +KLAE DK
Sbjct: 279 FAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVE-NNLSDKQKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
           CL DGADE+LQL+ + +  MQ
Sbjct: 339 CLADGADEHLQLISLCATVMQ 357

[Close]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot
Match: Q99J62 (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.7e-101
Identity = 184/321 (57.32%), Postives = 239/321 (74.45%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA QDEVV VL  +LE +  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I  +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEK 218

Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLIS-VSGVIPREVVNAL 249
           E + +  E ++ L  IS+GDLR+AIT+LQSA RL G    S+D+I+ ++GVIP   ++ +
Sbjct: 219 ENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGI 278

Query: 250 FAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADK 309
           F AC SG+FD     V N+  EG+   Q+++Q+ + ++E  +L D+ K+ I +KLAE DK
Sbjct: 279 FTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
           CL DGADE+LQL+ + +  MQ
Sbjct: 339 CLADGADEHLQLMSLCATVMQ 358

[Close]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot
Match: Q54MD4 (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.4e-91
Identity = 166/324 (51.23%), Postives = 223/324 (68.83%), Query Frame = 0


Query: 6   QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQ 65
           + ++PWV KYRPK V DV++Q++V+  L  +L T + PH+LFYGPPGTGKT+T LAIA  
Sbjct: 7   KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMD 66

Query: 66  LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEAD 125
           ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV         P   FK+IILDEAD
Sbjct: 67  IYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEAD 126

Query: 126 SMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILH 185
           SMT DAQ ALRRT+ET SK TRF  +CNYISRII+PLASRCAKFRFKPL      +R+  
Sbjct: 127 SMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKF 186

Query: 186 ICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVV 245
           I  +E +  +      +  +S GD+R+AITYLQSA R F + IS   + +++G +P +++
Sbjct: 187 ISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLI 246

Query: 246 NALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAE 305
             L   CK  +FD     V ++ A+GYPV+Q++SQ+F+ V+    L   QK+ I  K+  
Sbjct: 247 KQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGN 306

Query: 306 ADKCLVDGADEYLQLLDVVSQTMQ 330
            D+ L+DG++E+LQL D+ S  M+
Sbjct: 307 VDRNLIDGSEEFLQLFDLSSYIMK 330

[Close]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL
Match: A0A6J1C0Y1 (replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.4e-187
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 336

[Close]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL
Match: A0A6J1IVB8 (replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.1e-174
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL
Match: A0A1S3B9T6 (LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=LOC103487609 PE=3 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.5e-173
Identity = 315/335 (94.03%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ALF ACKSGNFD ANKEVNNV AEGYPVAQMLSQIFEVV+E N LQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA  SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQ 335

[Close]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL
Match: A0A6J1FIS1 (replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.5e-173
Identity = 317/336 (94.35%), Postives = 324/336 (96.43%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAAC+SGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL
Match: A0A0A0KYI8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.3e-172
Identity = 313/335 (93.43%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           P+EVV+ALF ACKSGNFD ANK+VNNV AEGYPVAQMLSQIFEVV+E N LQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQ   S+Q
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQ 335

[Close]

BLAST of Moc11g08210.1 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-158
Identity = 280/335 (83.58%), Postives = 305/335 (91.04%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Moc11g08210.1 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 533.9 bits (1374), Expect = 9.5e-152
Identity = 273/335 (81.49%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFG       VLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 328

[Close]

BLAST of Moc11g08210.1 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 529.3 bits (1362), Expect = 2.3e-150
Identity = 271/335 (80.90%), Postives = 294/335 (87.76%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EV            CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 323

[Close]

BLAST of Moc11g08210.1 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 525.8 bits (1353), Expect = 2.6e-149
Identity = 262/309 (84.79%), Postives = 286/309 (92.56%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADK 309
           CK LAE DK
Sbjct: 301 CKCLAETDK 309

[Close]

BLAST of Moc11g08210.1 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 199.5 bits (506), Expect = 4.2e-51
Identity = 118/331 (35.65%), Postives = 189/331 (57.10%), Query Frame = 0


Query: 3   PLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAI 62
           P    + PWVEKYRP+ + DVA   +++  +      +  PH+L YGPPGTGKT+T LA+
Sbjct: 33  PPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAV 92

Query: 63  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILD 122
           A +L+GP+ Y++ +LELNASDDRGI+VVR +I+DFA     S  +         K+++LD
Sbjct: 93  ARKLYGPK-YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSS------VKLVLLD 152

Query: 123 EADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKR 182
           EAD+MT+DAQ ALRR +E ++K TRF  I N++++II  L SRC +FRF PL    MS+R
Sbjct: 153 EADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQR 212

Query: 183 ILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSA-------ARLFGSSISSKDLIS 242
           + H+   E L +    L+ L  +S GD+R+A+  LQS               I+ +D+  
Sbjct: 213 LKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYL 272

Query: 243 VSGVIPREVVNALFAACKSGNFDLANKEVNNV-TAEGYPVAQMLSQIFEVVVEANHLQDE 302
            +G    + +  +     +  FD   K+V+ + T +G  +  ++ +I   + +   +   
Sbjct: 273 CTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIK-MPSA 332

Query: 303 QKARICKKLAEADKCLVDGADEYLQLLDVVS 326
            + ++   LA+ +  L  G ++ LQL  ++S
Sbjct: 333 VRVQLINDLADIEYRLSFGCNDKLQLGAIIS 355

The following BLAST results are available for this feature:

BLAST of Moc11g08210.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134048.1	1.1e-186	100.00	replication factor C subunit 4 [Momordica charantia]	[more]
XP_038897028.1	1.5e-175	95.22	replication factor C subunit 4 [Benincasa hispida]	[more]
XP_023523758.1	3.7e-174	94.94	replication factor C subunit 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022981026.1	6.3e-174	94.94	replication factor C subunit 4 [Cucurbita maxima]	[more]
KAG6608033.1	1.4e-173	94.94	Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc11g08210.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZX1	4.3e-157	83.58	Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1	[more]
Q9FXM3	4.7e-156	82.93	Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 ...	[more]
P35249	4.3e-101	58.26	Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2	[more]
Q99J62	9.7e-101	57.32	Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1	[more]
Q54MD4	2.4e-91	51.23	Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=...	[more]

BLAST of Moc11g08210.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0Y1	5.4e-187	100.00	replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE...	[more]
A0A6J1IVB8	3.1e-174	94.94	replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 ...	[more]
A0A1S3B9T6	1.5e-173	94.03	LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1FIS1	7.5e-173	94.35	replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=...	[more]
A0A0A0KYI8	1.3e-172	93.43	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV...	[more]

BLAST of Moc11g08210.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21690.1	3.0e-158	83.58	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	9.5e-152	81.49	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	2.3e-150	80.90	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.6e-149	84.79	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	4.2e-51	35.65	replication factor C subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 41..174 e-value: 6.6E-14 score: 62.2
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 45..172 e-value: 9.3E-17 score: 61.7
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 241..326 e-value: 7.7E-21 score: 74.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..173 e-value: 4.0E-55 score: 188.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..233
None	No IPR available	GENE3D	1.10.8.60		coord: 176..239 e-value: 6.1E-16 score: 59.8
None	No IPR available	GENE3D	1.20.272.10		coord: 240..330 e-value: 9.8E-32 score: 111.1
None	No IPR available	PANTHER	PTHR11669:SF20	REPLICATION FACTOR C SUBUNIT 4	coord: 5..330
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 5..330
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 174..233 e-value: 1.85213E-13 score: 62.5465
None	No IPR available	CDD	cd00009	AAA	coord: 26..166 e-value: 1.69244E-26 score: 100.683
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 240..326

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g08210	Moc11g08210	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g08210.1.exon1	Moc11g08210.1.exon1	exon
Moc11g08210.1.exon2	Moc11g08210.1.exon2	exon
Moc11g08210.1.exon3	Moc11g08210.1.exon3	exon
Moc11g08210.1.exon4	Moc11g08210.1.exon4	exon
Moc11g08210.1.exon5	Moc11g08210.1.exon5	exon
Moc11g08210.1.exon6	Moc11g08210.1.exon6	exon
Moc11g08210.1.exon7	Moc11g08210.1.exon7	exon
Moc11g08210.1.exon8	Moc11g08210.1.exon8	exon
Moc11g08210.1.exon9	Moc11g08210.1.exon9	exon
Moc11g08210.1.exon10	Moc11g08210.1.exon10	exon
Moc11g08210.1.exon11	Moc11g08210.1.exon11	exon
Moc11g08210.1.exon12	Moc11g08210.1.exon12	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g08210.1	cds.Moc11g08210.1	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_2	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_3	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_4	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_5	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_6	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_7	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_8	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_9	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_10	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_11	CDS
cds.Moc11g08210.1	cds.Moc11g08210.1_12	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g08210.1	Moc11g08210.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity