Moc11g08210 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g08210
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	replication factor C subunit 4
Location	chr11: 5837922 .. 5842167 (+)
RNA-Seq Expression	Moc11g08210
Synteny	Moc11g08210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATAGTACGTTTCACTTCTCATTCTTTCGTTTCACTAATTTCTCATAATATCATTCGTACTGTCAACCATGGGGCATTTTTGACAGTCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTGTACTTCATCGACTTCTCTTCTTTTTTCGTAGTAGTGATCGTATTTATCTTCTTAATCCAGCGTTATTTTTCTTCTCGATTGTTGGTTGAACAGTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGGTCCTTTTCTGCTCATATCTGTTTTTATAAAGTTGTATTTATGCGTGCCTCTTCAATTGTTATTGCTTTTTAGGAGGTTGTGAATTGATGTTTAGTAGTTCAGAATCCTTTCTAAGAAATATCTTGGATTCTCTTCATAGATGGGTTTGTAGGTTTCTAATGCGCAGTTCGCATGCTCGTATATATGTACAAAGGTTATCGGTTAAGGTTTTTGTCTGAGTTGTATATTCATGAGCTTTCTCAACTGCTGAAGTTATTAATATATCATGGCCTCACTATCTTGATGGTTGAATACTAGTTGTCAAGACTTGGGGAGGTTTTTGCTCAAAGGGACCTGTGATTTGCTTGTTTGAGAATTAAACTTCAACCTAATTCGATTTATAAAATGCCCAGACCATTGTTTTGCTGCATAACACATTAAGGTGCTATTTGAATGTCTTTTTAAGTTCTTATCTGATATAAAAAATTTATCTGTAGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGTAACTTTCTTAACCTTAGCTACCATTTTCACAACATTTCTGTTATGAACTTCTCACTTATTTATTTATTTTAATTATTTTAGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGGTGTGATCATAGTCTAGATGCAATCTATTTAATTTATTAGAGTTTCTACGAGTTTAGTTTTTTCCCTGATACTGAACATTATGTAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGTGAAGCTTAGCTTCCTTTATAGTGTTTAAATATCTCTTTTTATTGTTGCTGTTGATTTACTTTTTGTATTTGTGCTTTGGATATTCACGACATGCTTCATCCTTTTATGGAGTAAATTCATGATCATAATTGATAATTCATAAGATGTTTGCATTTTTGGCCACTTATGAAGGAGCAACGAGTGAGTCGGTAGTAATTTGCTTATGGTAAAATCATTGAGACAGTGTAAGAGGGTATGTGGTTGGAATCTCTGAGAACAATAGTAGATGACTACAACCTTGGGGCGGGCACGGGAGCCCGTGGGTATAGGGGAGCAAAGTTCAAGGAAAAAAAAAAGTAGATGGCCACAATAGTTTTTAACTAAATTGCAATTTAATTGTCTTAAAAGTTAAATTCACAATGAGTATGGGAGGTGAATTTCTGAAAACACGTGGGTGAGCACAATAATATTTAGCTAGTTGCAACTTGATTTCTATGAATATTTTGATATTCACAATCTTTTGTATTAATGTATATATTTTGGCAACATTTGTACAATGTATGGAAATATTGCCTTGTCTTTCTCATGCATCCTAAATGGCCCGTACTCATATTTTTGGAATAGAGGAAAGTGATTCCTCAATTGTTTCTGGTTTCTACAATGGTCCATTTCTACTTGGCCTTGAATTTGGTGAAGCTAAACCATCATCTTAGTGCTTTGTCTATCCGTGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGTTTGCTCATAGTTACTTAGCATTACAAAGTATGGTTTGAAGTAAGTTATTGGCATGACCAATGTGTTCTGAACTTACAATCTATGTAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGGTACGATTTAGTCTGCAGCATTGCACTTATTTCAGTCAACGACTTAGCTTTTGCTATCCCATGCTGAACATGCATGCATTTGGAGCTTGGATAATTAAGAGGAGACTAATCAATCGTTCTATTCTACTAGAATAAGTCGAAGTTCTATTTTAGTTTGGGGCTACATTAAACTAACCTGATTGCATGCCCTCTACGTGGAGAACAATTTACCTTTCCTGTTATTTTTGGTGATCATTTGGGATGAGAAATGTTGACCATTTGTTGCTATTGAATAGTAGAATTTATTTCCTATATAACTTACTGTACTTGTAAAATTGGAGTACCGAAAAAAATTGCATTAGGGTAGACTTCACACCAACTACGTTTGGAGTTGTACATAATGTCTAACTTCTATATCTCTCGTAACGGAAATACTTGAGGATCGGATGAGCTTCTGTTGTGTTAATAAGTAGGATCAAATTATGAGAGAATTAGATGAATAATAAATCCAATCACTCATTGAATATTGTCAACAAGCTCAATTGTTGTAGTTATTTGTATTAGAAGTCAGCTTAGTAAGTTAAGTTACTTTTCAGGCACTCTTGGTCAGTTGACTCAATTTATAGTTGAAAATAGAATAGTTTCTATCTTTTCTAACTGCTTTTTACACTTCTTTAATAAACATTCTCATCCTTCAGCTAGCAACTGAATGTTGATATTCCTAATGGAGATTCTTGTTTTTTTCTCTCCAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTAGTTATGCAATTTTTTTATTATTTTATTATTTATTATTTTTTGAAGTCATAGCATCCTTAGAATACAAAGAAAGTAAATAGTTAAAAATGGTTATGCTTCACTTTGCTCCTTTGATGAATGTTGATCCTGACCCGTAAACAAAAAGTTTGTATATGCCTTGCCCTTATGTCCATGGCTTTCAACTTCTTTCAGAACCCAATTCCTTGGATGGCTAATGGTCCTTTCTGAAACTGTGGCATTGGAGAATGATCCTAAGTACTATTTGTGATTTTTTTTTTCTTTTGGATGGTTGGATTTTTAACTAGATAATGTTTCATATTGTAGGTTTTGTATGAGTTTTGAGTGTTCCATATTCTGCCATCAATTATTTAACTTATGCTAGATTTTTCGGCTGTTTGGCAATTTAATAGTTGATGAATTCTCTCATCTTGTTCTCAAAAGCATGCTTAATAATTTGCTTGCAACATATTTCGCACGGAATTGTCTTATATTTTGAGGACTCGTAGTATCTAACTTTTTAACACATGCAGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGGTTTATTCTTTTTCAATCTATATTGTGTTATTTTGTTCTTAAGGGTGGACGGAGATACGTAATACATTAATGTTTCCCTCAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGGTTACTCTATCCATTTCCATGTTGAATTTCGTATTTTCTGTTCCAAAATTCATGTGATTTTTGCATTAGCTATGCTCAGATTAGCAATAGAAGTTTGTTTTTTGTTCTTTTCGAAGTTGCATTAAATAACTTATACGTCAAATATTTTTGTTTGGTTTGTTTTCCGTTTTAGTTATAAAATACGTGGATCTAAATTGAATTTTACCCCGGTAATTTTCTTGAGTGACATCTAGATCATGCAAACAAACATTTTTGTCGTGCAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

mRNA sequence

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

Coding sequence (CDS)

ATGGCGCCATTGTCGCAGAGCTCTCAACCATGGGTGGAGAAATATCGACCGAAGCAAGTGAAAGATGTAGCGCATCAGGATGAAGTGGTTCGAGTCCTCACCAACACTCTCGAGACTTCTAGTTGTCCTCACATGCTTTTCTATGGACCGCCTGGTACCGGGAAAACCACCACCGCTCTCGCGATTGCTCATCAACTTTTCGGCCCCGAACTTTACAAGTCCAGAGTTTTGGAGTTGAATGCAAGTGATGACCGTGGGATCAATGTTGTTCGGACTAAGATCAAAGATTTTGCTGGTGTTGCAGTAGGCAGTGGCCAGCGTCAAGGGGGTTATCCTTGTCCACCGTTCAAGATAATAATTCTGGATGAGGCTGATTCAATGACTGAAGACGCTCAGAATGCCCTGAGGCGTACCATGGAAACACACTCCAAAGTAACAAGATTCTTTTTTATATGCAACTATATCAGCAGGATCATAGAGCCCCTTGCTTCCAGGTGTGCAAAATTTAGGTTTAAACCACTTTCTGAAGAGGTTATGAGCAAACGTATTTTGCACATTTGTAATGAAGAATGTCTAAGTCTAGATGGAGAGGCTCTTTCAACCTTAAGTTCAATCTCTCAAGGTGACCTACGTCGAGCTATCACATACTTACAGTCAGCTGCACGCTTGTTTGGATCATCAATCTCTTCCAAGGATCTAATTAGTGTGTCTGGGGTTATCCCTCGAGAGGTTGTCAACGCACTATTTGCTGCTTGTAAAAGTGGTAACTTTGATCTTGCGAACAAGGAAGTGAATAATGTAACTGCAGAGGGATATCCAGTGGCTCAGATGCTTTCACAGATATTTGAGGTGGTTGTTGAAGCCAATCATTTGCAAGATGAACAGAAGGCTAGGATATGCAAGAAGTTGGCTGAAGCAGATAAGTGTTTGGTTGATGGTGCAGATGAATATTTACAACTGCTCGATGTGGTTAGTCAAACAATGCAAGCCTCATGTAGTATGCAACCGTGA

Protein sequence

MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP

Homology

[Close]

BLAST of Moc11g08210 vs. NCBI nr
Match: XP_022134048.1 (replication factor C subunit 4 [Momordica charantia])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 336

[Close]

BLAST of Moc11g08210 vs. NCBI nr
Match: XP_038897028.1 (replication factor C subunit 4 [Benincasa hispida])

HSP 1 Score: 626.3 bits (1614), Expect = 1.5e-175
Identity = 319/335 (95.22%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL+SVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVSVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ALF+ACKSGNFD+ANKEVNNV AEGYPVAQMLSQIFEVVVE N LQDEQKARIC
Sbjct: 241 PREVVDALFSACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVVEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA  SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQ 335

[Close]

BLAST of Moc11g08210 vs. NCBI nr
Match: XP_023523758.1 (replication factor C subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 621.7 bits (1602), Expect = 3.7e-174
Identity = 319/336 (94.94%), Postives = 327/336 (97.32%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE+VMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEKVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210 vs. NCBI nr
Match: XP_022981026.1 (replication factor C subunit 4 [Cucurbita maxima])

HSP 1 Score: 620.9 bits (1600), Expect = 6.3e-174
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210 vs. NCBI nr
Match: KAG6608033.1 (Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot
Match: Q93ZX1 (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 4.3e-157
Identity = 280/335 (83.58%), Postives = 305/335 (91.04%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot
Match: Q9FXM3 (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 4.7e-156
Identity = 277/334 (82.93%), Postives = 305/334 (91.32%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL  SSQPWVEKYRP+QVKDVAHQ+EVVRVLT TL+T+  PHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIA+QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  R+GGYPCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RKGGYPCPPYKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLD +AL+TLS+IS GDLRRAITYLQSAARLFGSSISS DLISVSG I
Sbjct: 181 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           P +VV +L A+CKSG FD+ANKEVNN+ A+GYPV+Q++SQ  +V+V A+ + DEQKARIC
Sbjct: 241 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           KKL EADKCLVDGADEYLQLLDV S+T++A   M
Sbjct: 301 KKLGEADKCLVDGADEYLQLLDVASETIRALFDM 333

[Close]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot
Match: P35249 (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-101
Identity = 187/321 (58.26%), Postives = 243/321 (75.70%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA Q+EVV VL  +LE +  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I  +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKK 218

Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLF-GSSISSKDLISVSGVIPREVVNAL 249
           E + +  E ++ L  +S+GDLR+AIT+LQSA RL  G  I+ K +  ++GVIP E ++ +
Sbjct: 219 ENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGV 278

Query: 250 FAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADK 309
           FAAC+SG+FD     V ++  EG+   Q+++Q+ +VVVE N+L D+QK+ I +KLAE DK
Sbjct: 279 FAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVVE-NNLSDKQKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
           CL DGADE+LQL+ + +  MQ
Sbjct: 339 CLADGADEHLQLISLCATVMQ 357

[Close]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot
Match: Q99J62 (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.7e-101
Identity = 184/321 (57.32%), Postives = 239/321 (74.45%), Query Frame = 0


Query: 10  PWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
           PWVEKYRPK V +VA QDEVV VL  +LE +  P++LFYGPPGTGKT+T LA A +LFGP
Sbjct: 39  PWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGP 98

Query: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEADSMTE 129
           EL++ RVLELNASD+RGI VVR K+K+FA + V SG R  G PCPPFKI+ILDEADSMT 
Sbjct: 99  ELFRLRVLELNASDERGIQVVREKVKNFAQLTV-SGSRSDGKPCPPFKIVILDEADSMTS 158

Query: 130 DAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHICNE 189
            AQ ALRRTME  SK TRF  ICNY+SRIIEPL SRC+KFRFKPLS+++  +R+L I  +
Sbjct: 159 AAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEK 218

Query: 190 ECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLIS-VSGVIPREVVNAL 249
           E + +  E ++ L  IS+GDLR+AIT+LQSA RL G    S+D+I+ ++GVIP   ++ +
Sbjct: 219 ENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGI 278

Query: 250 FAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAEADK 309
           F AC SG+FD     V N+  EG+   Q+++Q+ + ++E  +L D+ K+ I +KLAE DK
Sbjct: 279 FTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDK 338

Query: 310 CLVDGADEYLQLLDVVSQTMQ 330
           CL DGADE+LQL+ + +  MQ
Sbjct: 339 CLADGADEHLQLMSLCATVMQ 358

[Close]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot
Match: Q54MD4 (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.4e-91
Identity = 166/324 (51.23%), Postives = 223/324 (68.83%), Query Frame = 0


Query: 6   QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAIAHQ 65
           + ++PWV KYRPK V DV++Q++V+  L  +L T + PH+LFYGPPGTGKT+T LAIA  
Sbjct: 7   KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMD 66

Query: 66  LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILDEAD 125
           ++GPEL K RVLELNASD+RGI VVRTKIK+FAG AV         P   FK+IILDEAD
Sbjct: 67  IYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEAD 126

Query: 126 SMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILH 185
           SMT DAQ ALRRT+ET SK TRF  +CNYISRII+PLASRCAKFRFKPL      +R+  
Sbjct: 127 SMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKF 186

Query: 186 ICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVIPREVV 245
           I  +E +  +      +  +S GD+R+AITYLQSA R F + IS   + +++G +P +++
Sbjct: 187 ISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLI 246

Query: 246 NALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARICKKLAE 305
             L   CK  +FD     V ++ A+GYPV+Q++SQ+F+ V+    L   QK+ I  K+  
Sbjct: 247 KQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGN 306

Query: 306 ADKCLVDGADEYLQLLDVVSQTMQ 330
            D+ L+DG++E+LQL D+ S  M+
Sbjct: 307 VDRNLIDGSEEFLQLFDLSSYIMK 330

[Close]

BLAST of Moc11g08210 vs. ExPASy TrEMBL
Match: A0A6J1C0Y1 (replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.4e-187
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
Sbjct: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC
Sbjct: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 337
           KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQP 336

[Close]

BLAST of Moc11g08210 vs. ExPASy TrEMBL
Match: A0A6J1IVB8 (replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.1e-174
Identity = 319/336 (94.94%), Postives = 325/336 (96.73%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHS VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSNVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTL SISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLGSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAACKSGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQKA+IC
Sbjct: 241 PREVVDELFAACKSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQKAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210 vs. ExPASy TrEMBL
Match: A0A1S3B9T6 (LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=LOC103487609 PE=3 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.5e-173
Identity = 315/335 (94.03%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET+SCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRF FICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFXFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSS+SQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHISNEEGLSLDGEALSTLSSMSQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ALF ACKSGNFD ANKEVNNV AEGYPVAQMLSQIFEVV+E N LQDEQKARIC
Sbjct: 241 PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA  SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQ 335

[Close]

BLAST of Moc11g08210 vs. ExPASy TrEMBL
Match: A0A6J1FIS1 (replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.5e-173
Identity = 317/336 (94.35%), Postives = 324/336 (96.43%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMG 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLD EALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSG+I
Sbjct: 181 KRILHISNEEGLSLDEEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           PREVV+ LFAAC+SGNFDLANKEVNNV AEGYPVAQMLSQIFEVV+EA+ LQDEQ A+IC
Sbjct: 241 PREVVDELFAACRSGNFDLANKEVNNVIAEGYPVAQMLSQIFEVVIEAHDLQDEQTAKIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQA-SCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQA S SMQ
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQALSSSMQ 336

[Close]

BLAST of Moc11g08210 vs. ExPASy TrEMBL
Match: A0A0A0KYI8 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.3e-172
Identity = 313/335 (93.43%), Postives = 323/335 (96.42%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAPL QSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAV SGQRQGGYPCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
           KRILHI NEE LSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDL++VSG+I
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEANHLQDEQKARIC 300
           P+EVV+ALF ACKSGNFD ANK+VNNV AEGYPVAQMLSQIFEVV+E N LQDEQKARIC
Sbjct: 241 PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQASCSMQ 336
           KKLAEADKCLVDGADEYLQLLDVVSQTMQ   S+Q
Sbjct: 301 KKLAEADKCLVDGADEYLQLLDVVSQTMQVLRSIQ 335

[Close]

BLAST of Moc11g08210 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-158
Identity = 280/335 (83.58%), Postives = 305/335 (91.04%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Moc11g08210 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 533.9 bits (1374), Expect = 9.5e-152
Identity = 273/335 (81.49%), Postives = 298/335 (88.96%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFG       VLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 328

[Close]

BLAST of Moc11g08210 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 529.3 bits (1362), Expect = 2.3e-150
Identity = 271/335 (80.90%), Postives = 294/335 (87.76%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EV            CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADKCLVDGADEYLQLLDVVSQTMQASCSM 335
           CK LAE DK LVDGADEYLQLLDV S T+ A   M
Sbjct: 301 CKCLAETDKRLVDGADEYLQLLDVASSTICALSEM 323

[Close]

BLAST of Moc11g08210 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 525.8 bits (1353), Expect = 2.6e-149
Identity = 262/309 (84.79%), Postives = 286/309 (92.56%), Query Frame = 0


Query: 1   MAPLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTAL 60
           MAP+ QSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTL+T+ CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIII 120
           AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQ GYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
           LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 181 KRILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI 240
            RILHICNEE LSLDGEALSTLSSISQGDLRRAITYLQSA RLFGS+I+S DL++VSGV+
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 241 PREVVNALFAACKSGNFDLANKEVNNVTAEGYPVAQMLSQIFEVVVEA-NHLQDEQKARI 300
           P EVVN LF ACKSG+FD+ANKEV+N+ AEGYP +Q+++Q+F++V EA + + D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 301 CKKLAEADK 309
           CK LAE DK
Sbjct: 301 CKCLAETDK 309

[Close]

BLAST of Moc11g08210 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 199.5 bits (506), Expect = 4.2e-51
Identity = 118/331 (35.65%), Postives = 189/331 (57.10%), Query Frame = 0


Query: 3   PLSQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSSCPHMLFYGPPGTGKTTTALAI 62
           P    + PWVEKYRP+ + DVA   +++  +      +  PH+L YGPPGTGKT+T LA+
Sbjct: 33  PPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAV 92

Query: 63  AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVGSGQRQGGYPCPPFKIIILD 122
           A +L+GP+ Y++ +LELNASDDRGI+VVR +I+DFA     S  +         K+++LD
Sbjct: 93  ARKLYGPK-YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSS------VKLVLLD 152

Query: 123 EADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKR 182
           EAD+MT+DAQ ALRR +E ++K TRF  I N++++II  L SRC +FRF PL    MS+R
Sbjct: 153 EADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQR 212

Query: 183 ILHICNEECLSLDGEALSTLSSISQGDLRRAITYLQSA-------ARLFGSSISSKDLIS 242
           + H+   E L +    L+ L  +S GD+R+A+  LQS               I+ +D+  
Sbjct: 213 LKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYL 272

Query: 243 VSGVIPREVVNALFAACKSGNFDLANKEVNNV-TAEGYPVAQMLSQIFEVVVEANHLQDE 302
            +G    + +  +     +  FD   K+V+ + T +G  +  ++ +I   + +   +   
Sbjct: 273 CTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIK-MPSA 332

Query: 303 QKARICKKLAEADKCLVDGADEYLQLLDVVS 326
            + ++   LA+ +  L  G ++ LQL  ++S
Sbjct: 333 VRVQLINDLADIEYRLSFGCNDKLQLGAIIS 355

The following BLAST results are available for this feature:

BLAST of Moc11g08210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134048.1	1.1e-186	100.00	replication factor C subunit 4 [Momordica charantia]	[more]
XP_038897028.1	1.5e-175	95.22	replication factor C subunit 4 [Benincasa hispida]	[more]
XP_023523758.1	3.7e-174	94.94	replication factor C subunit 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022981026.1	6.3e-174	94.94	replication factor C subunit 4 [Cucurbita maxima]	[more]
KAG6608033.1	1.4e-173	94.94	Replication factor C subunit 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Moc11g08210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZX1	4.3e-157	83.58	Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=1 SV=1	[more]
Q9FXM3	4.7e-156	82.93	Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 ...	[more]
P35249	4.3e-101	58.26	Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2	[more]
Q99J62	9.7e-101	57.32	Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1	[more]
Q54MD4	2.4e-91	51.23	Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=...	[more]

BLAST of Moc11g08210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0Y1	5.4e-187	100.00	replication factor C subunit 4 OS=Momordica charantia OX=3673 GN=LOC111006413 PE...	[more]
A0A6J1IVB8	3.1e-174	94.94	replication factor C subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111480296 PE=3 ...	[more]
A0A1S3B9T6	1.5e-173	94.03	LOW QUALITY PROTEIN: replication factor C subunit 4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1FIS1	7.5e-173	94.35	replication factor C subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111445849 PE=...	[more]
A0A0A0KYI8	1.3e-172	93.43	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G361280 PE=3 SV...	[more]

BLAST of Moc11g08210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21690.1	3.0e-158	83.58	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	9.5e-152	81.49	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	2.3e-150	80.90	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	2.6e-149	84.79	ATPase family associated with various cellular activities (AAA)	[more]
AT1G77470.1	4.2e-51	35.65	replication factor C subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 41..174 e-value: 6.6E-14 score: 62.2
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 45..172 e-value: 9.3E-17 score: 61.7
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 241..326 e-value: 7.7E-21 score: 74.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..173 e-value: 4.0E-55 score: 188.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..233
None	No IPR available	GENE3D	1.10.8.60		coord: 176..239 e-value: 6.1E-16 score: 59.8
None	No IPR available	GENE3D	1.20.272.10		coord: 240..330 e-value: 9.8E-32 score: 111.1
None	No IPR available	PANTHER	PTHR11669:SF20	REPLICATION FACTOR C SUBUNIT 4	coord: 5..330
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 5..330
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 174..233 e-value: 1.85213E-13 score: 62.5465
None	No IPR available	CDD	cd00009	AAA	coord: 26..166 e-value: 1.69244E-26 score: 100.683
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 240..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g08210.1	Moc11g08210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity