Moc06g06930.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06930.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosome biogenesis regulatory protein
Location	chr6: 5030328 .. 5032786 (+)
Sequence length	987
RNA-Seq Expression	Moc06g06930.1
Synteny	Moc06g06930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGTTCCTCTTTCTTCCCTCTCCATAAATACATCAACTATAATTGCTTCACGGATTAGGTTCCAATGGGTTCTTCTTTTAAGTTGCTGGTACTGCTCTGTTTACATCAAACTGTGCTTTCGTTTTGCTTGATTCACGCCTTCGAACCAGAACCTGGGTATATCGAGTTATGCGGTTGAATGCTGTTTATTTGATGTATTATTGACTTAAATTAGAGAAAGCTACGAACTTGAGGATTTTGGTTGTTTAGAATAATTACATTATTTTAGACATGTTCACACATACGTACATGTATATGTTATTCCGGGAGAAGCCTAATTTGTCATTGAAATTAATAAAGTCAGAGAATGTTTATTGTATTTGCTTGGTTACTTTTGTAATTACAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATGTATGCTCTTAAATAATTTTATGGATGTTTACATTGATTATTTCATCATCACTTTTTAGTTATGGATGTTTACCTTTTTGGGTGATGTGTAATATCTTTATTTCTTTCTTTCCAGCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTTGGTCCTTTTGTTATGCTCACATCTTTTTTTGTGATGTTGTCTTTTATGTTAGAAGATTTGTGTTCCCCGTCCTTCCATTGTGAGACTTGAATTGAATTTAGTTGAAAGGCCGACTTGCAGCAAAAGAAACATCTGAAAAGGAAGAAAAGAAACAACAAGGAATGGAGGCATAATTCAGTCAAATGCATGACCTTGGAATAGGGAGTTTCGTGGGTAGAATTTAATTTTAGTACATAATGACTTTTGCAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGGTAATACTTAATAGAACCTTGCATTTTAAGATAAGCTACTTTTCCTTTCGTTAGTTATGTCTTTTTATTTTCTTACTTGATGACAAAATTTTGAACATGGTTGCATGACAGAGATAAGTAGAATATTGGTTGATTATATTGCTTGCCATATTCATTCTCGGCTTACATTATTATCAAAATGTCCATTGAGTATCACGCTTTTCACATTTTCAGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGGTTTTTGCCCCTTATCACTGTTATTGGGTGTTGAACAAGTAATTAGATTATAACTCCTTTCTTTGCAGTCTTCCCTTTCTCACTTCTCCTTACTGCCGGTACAATTAAAGTATATCATATCAGACTAACATATACATTTGGGTAATTAAATTTCTTCTATATTGGGTAGGAGGGTGGAGCATCTGACCACAACCTGTACATGTGAATCCCATTAATTTGTTCCTTCTGTATCCTAGAATATCATATCATCTTAAATCCATCTTTTGTTTGTCATTCCATTACCGTTCTGTTATTTATAGCTAAAGTTGATTATACTTATGCAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGGTTAACCAAATAATCCTTTTTCCTTGGCATGCTCGAGCATACTTTCTGTTATCATTAAGTAACATTTTGTTCTCTGTTTACATGCAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGTTTTTTCTCTCTATTTTTGGTTGAAACCAACATCTTTCTTTGTTGCTCCATCATTGGAAATTTTGTCTAATGGTCTTCGCAAATTATCCTGATTATAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

mRNA sequence

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

Coding sequence (CDS)

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

Protein sequence

MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTSSKLKPNKKPQKKSMKKGVSNKGKAK

Homology

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BLAST of Moc06g06930.1 vs. NCBI nr
Match: XP_022144805.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 630.9 bits (1626), Expect = 6.0e-177
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           STSSKLKPNKKPQKKSMKKGVSNKGKAK
Sbjct: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Moc06g06930.1 vs. NCBI nr
Match: XP_022961058.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata])

HSP 1 Score: 564.7 bits (1454), Expect = 5.2e-157
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ A KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930.1 vs. NCBI nr
Match: XP_023515967.1 (ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515969.1 ribosome biogenesis regulatory protein homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156
Identity = 296/329 (89.97%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILNVNKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNVNKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930.1 vs. NCBI nr
Match: XP_022987784.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Moc06g06930.1 vs. NCBI nr
Match: KAG6589856.1 (Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.8 bits (1431), Expect = 2.4e-154
Identity = 292/329 (88.75%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++ VD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVLVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+R+ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLK NKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKANKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 396.0 bits (1016), Expect = 4.2e-109
Identity = 208/319 (65.20%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE 
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTET 64

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
            DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+ RKK+K+ +DEQT  +KRRH
Sbjct: 65  NDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRH 124

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPS
Sbjct: 125 GYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALPS 184

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAAT+LPI+GT+  PKK+ KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ 
Sbjct: 185 HVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKHH 244

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Sbjct: 245 KYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK-------S 304

Query: 301 STSSKLKPNKKPQKKSMKK 320
             S KLKP K   KK   K
Sbjct: 305 GRSDKLKPKKDITKKPANK 316

[Close]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-30
Identity = 113/328 (34.45%), Postives = 178/328 (54.27%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLWRLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     +  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K ++K  ++G S K K
Sbjct: 326 QEEAAKRRKMSQKGKRKGGRQGPSGKRK 324

[Close]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 113/328 (34.45%), Postives = 178/328 (54.27%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLWQLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     +  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K +KK  ++G S + K
Sbjct: 326 QEEAAKRRKMSQKGKKKGGRQGPSGRRK 324

[Close]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 110/323 (34.06%), Postives = 176/323 (54.49%), Query Frame = 0


Query: 6   QLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDG 65
           +L+ DLG+L+A   NP   L     ++E  +    +  T+L   + N+L+ LP+    + 
Sbjct: 31  ELEFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLWQLPTERVEEA 90

Query: 66  PLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRHGYD 125
            + RLP P TRLPREK +P+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+RR GY 
Sbjct: 91  LVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQ 150

Query: 126 RANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQ 185
           RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  LPS   
Sbjct: 151 RARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS--- 210

Query: 186 LAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFL 245
             A  +  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK RKF 
Sbjct: 211 --AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQ 270

Query: 246 PVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTS 305
           P+    G  + ER+    +L  + SK     +++ +A N      ++ R+ D       +
Sbjct: 271 PLF---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATN------KQMREED---QEEAA 324

Query: 306 SKLKPNKKPQKKSMKKGVSNKGK 327
            + K ++K ++K  ++G  +K K
Sbjct: 331 KRRKMSQKGKRKGGRQGPGSKRK 324

[Close]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 114/328 (34.76%), Postives = 176/328 (53.66%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +LQ DLG+L+A   NP   L     + E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLWQLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  L
Sbjct: 146 RWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QL 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     A  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K ++K  ++G   K K
Sbjct: 326 QEEAAKRRKMSQKGKRKGGRQGPGGKRK 324

[Close]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL
Match: A0A6J1CSP0 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111014399 PE=3 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 2.9e-177
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           STSSKLKPNKKPQKKSMKKGVSNKGKAK
Sbjct: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL
Match: A0A6J1HAS5 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111461680 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.5e-157
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ A KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL
Match: A0A6J1JJT9 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111485227 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.2e-156
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.2e-144
Identity = 271/328 (82.62%), Postives = 299/328 (91.16%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           +ENQ   Q+DLGHLMAFNPHH   S PSSRE+LV+ECLQKGTELVQ+IAN+LF LPSTED
Sbjct: 3   IENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTED 62

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPP TRLPREK LPKPKPPTKWELFA+K+GIKNRKKDK  YDEQT TWKRRH
Sbjct: 63  RDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRH 122

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDE+NIPIIEAKMTDE G DPFA R+++K+KRVEKQE NRLQNLKQAAKVGALPS
Sbjct: 123 GYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPS 182

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           H+QLAATALPITGTQ APKK+TKDELGNVAGMAAT+TASGGKFD+K  GEKP KH+GKYR
Sbjct: 183 HIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYR 242

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTG+GSREREQTE VL+RLISKNSHEILNVNKA+NMYNVK+EK++++ GK SS
Sbjct: 243 KFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQGK-SS 302

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           S SSKLKPNKK QKK +KKG S +GKAK
Sbjct: 303 SMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.6e-143
Identity = 270/329 (82.07%), Postives = 298/329 (90.58%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQ  Q+DLG+LMAFNPHH   S  SSRE+LV+ECLQKG EL Q IAN+LF LPSTED
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTED 62

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPP TRLPREK LPKPKPPTKWELFAKKRGIKNRKKDKI YD+QT +WKRRH
Sbjct: 63  RDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKRRH 122

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA R++NK+ RVEKQE N+LQNLKQAAKVGALPS
Sbjct: 123 GYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPS 182

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ APKK+TKDELGNVAGMAAT+TASGGKFD+KL GEKP KH+GKYR
Sbjct: 183 HVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYR 242

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHD-GKPS 300
           KFLPVVEGTG+GS+EREQTE VLNRLISKNSHEILN+NKA+NMYNVK+EK++++  GK S
Sbjct: 243 KFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSS 302

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           S +S+KLKPNKK QKK +KKG S  GKAK
Sbjct: 303 SMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Moc06g06930.1 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 3.0e-110
Identity = 208/319 (65.20%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE 
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTET 64

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
            DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+ RKK+K+ +DEQT  +KRRH
Sbjct: 65  NDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRH 124

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPS
Sbjct: 125 GYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALPS 184

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAAT+LPI+GT+  PKK+ KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ 
Sbjct: 185 HVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKHH 244

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Sbjct: 245 KYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK-------S 304

Query: 301 STSSKLKPNKKPQKKSMKK 320
             S KLKP K   KK   K
Sbjct: 305 GRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of Moc06g06930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144805.1	6.0e-177	100.00	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]
XP_022961058.1	5.2e-157	89.97	ribosome biogenesis regulatory protein homolog [Cucurbita moschata]	[more]
XP_023515967.1	1.2e-156	89.97	ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp....	[more]
XP_022987784.1	1.7e-155	89.06	ribosome biogenesis regulatory protein homolog [Cucurbita maxima]	[more]
KAG6589856.1	2.4e-154	88.75	Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosp...	[more]

BLAST of Moc06g06930.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	4.2e-109	65.20	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9CYH6	5.1e-30	34.45	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.1e-29	34.45	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q2KIH4	1.9e-29	34.06	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]
Q15050	1.9e-29	34.76	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]

BLAST of Moc06g06930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSP0	2.9e-177	100.00	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HAS5	2.5e-157	89.97	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JJT9	8.2e-156	89.06	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114852...	[more]
A0A0A0LZY0	7.2e-144	82.62	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A6J1HW20	3.6e-143	82.07	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]

BLAST of Moc06g06930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	3.0e-110	65.20	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 7..169 e-value: 7.5E-52 score: 175.5
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..89
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc06g06930	Moc06g06930	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc06g06930.1.exon1	Moc06g06930.1.exon1	exon
Moc06g06930.1.exon2	Moc06g06930.1.exon2	exon
Moc06g06930.1.exon3	Moc06g06930.1.exon3	exon
Moc06g06930.1.exon4	Moc06g06930.1.exon4	exon
Moc06g06930.1.exon5	Moc06g06930.1.exon5	exon
Moc06g06930.1.exon6	Moc06g06930.1.exon6	exon
Moc06g06930.1.exon7	Moc06g06930.1.exon7	exon
Moc06g06930.1.exon8	Moc06g06930.1.exon8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc06g06930.1	cds.Moc06g06930.1	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_2	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_3	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_4	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_5	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_6	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_7	CDS
cds.Moc06g06930.1	cds.Moc06g06930.1_8	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc06g06930.1	Moc06g06930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor