Moc06g06930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribosome biogenesis regulatory protein
Location	chr6: 5030328 .. 5032786 (+)
RNA-Seq Expression	Moc06g06930
Synteny	Moc06g06930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGTTCCTCTTTCTTCCCTCTCCATAAATACATCAACTATAATTGCTTCACGGATTAGGTTCCAATGGGTTCTTCTTTTAAGTTGCTGGTACTGCTCTGTTTACATCAAACTGTGCTTTCGTTTTGCTTGATTCACGCCTTCGAACCAGAACCTGGGTATATCGAGTTATGCGGTTGAATGCTGTTTATTTGATGTATTATTGACTTAAATTAGAGAAAGCTACGAACTTGAGGATTTTGGTTGTTTAGAATAATTACATTATTTTAGACATGTTCACACATACGTACATGTATATGTTATTCCGGGAGAAGCCTAATTTGTCATTGAAATTAATAAAGTCAGAGAATGTTTATTGTATTTGCTTGGTTACTTTTGTAATTACAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATGTATGCTCTTAAATAATTTTATGGATGTTTACATTGATTATTTCATCATCACTTTTTAGTTATGGATGTTTACCTTTTTGGGTGATGTGTAATATCTTTATTTCTTTCTTTCCAGCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTTGGTCCTTTTGTTATGCTCACATCTTTTTTTGTGATGTTGTCTTTTATGTTAGAAGATTTGTGTTCCCCGTCCTTCCATTGTGAGACTTGAATTGAATTTAGTTGAAAGGCCGACTTGCAGCAAAAGAAACATCTGAAAAGGAAGAAAAGAAACAACAAGGAATGGAGGCATAATTCAGTCAAATGCATGACCTTGGAATAGGGAGTTTCGTGGGTAGAATTTAATTTTAGTACATAATGACTTTTGCAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGGTAATACTTAATAGAACCTTGCATTTTAAGATAAGCTACTTTTCCTTTCGTTAGTTATGTCTTTTTATTTTCTTACTTGATGACAAAATTTTGAACATGGTTGCATGACAGAGATAAGTAGAATATTGGTTGATTATATTGCTTGCCATATTCATTCTCGGCTTACATTATTATCAAAATGTCCATTGAGTATCACGCTTTTCACATTTTCAGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGGTTTTTGCCCCTTATCACTGTTATTGGGTGTTGAACAAGTAATTAGATTATAACTCCTTTCTTTGCAGTCTTCCCTTTCTCACTTCTCCTTACTGCCGGTACAATTAAAGTATATCATATCAGACTAACATATACATTTGGGTAATTAAATTTCTTCTATATTGGGTAGGAGGGTGGAGCATCTGACCACAACCTGTACATGTGAATCCCATTAATTTGTTCCTTCTGTATCCTAGAATATCATATCATCTTAAATCCATCTTTTGTTTGTCATTCCATTACCGTTCTGTTATTTATAGCTAAAGTTGATTATACTTATGCAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGGTTAACCAAATAATCCTTTTTCCTTGGCATGCTCGAGCATACTTTCTGTTATCATTAAGTAACATTTTGTTCTCTGTTTACATGCAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGTTTTTTCTCTCTATTTTTGGTTGAAACCAACATCTTTCTTTGTTGCTCCATCATTGGAAATTTTGTCTAATGGTCTTCGCAAATTATCCTGATTATAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

mRNA sequence

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

Coding sequence (CDS)

ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATGTCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAAGATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGATGAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTTTGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAACTAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGTGGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGAGCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAACACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA

Protein sequence

MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTSSKLKPNKKPQKKSMKKGVSNKGKAK

Homology

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BLAST of Moc06g06930 vs. NCBI nr
Match: XP_022144805.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 630.9 bits (1626), Expect = 6.0e-177
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           STSSKLKPNKKPQKKSMKKGVSNKGKAK
Sbjct: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Moc06g06930 vs. NCBI nr
Match: XP_022961058.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata])

HSP 1 Score: 564.7 bits (1454), Expect = 5.2e-157
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ A KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930 vs. NCBI nr
Match: XP_023515967.1 (ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515969.1 ribosome biogenesis regulatory protein homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156
Identity = 296/329 (89.97%), Postives = 309/329 (93.92%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILNVNKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNVNKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930 vs. NCBI nr
Match: XP_022987784.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Moc06g06930 vs. NCBI nr
Match: KAG6589856.1 (Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.8 bits (1431), Expect = 2.4e-154
Identity = 292/329 (88.75%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++ VD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVLVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+R+ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRKENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLK NKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKANKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 396.0 bits (1016), Expect = 4.2e-109
Identity = 208/319 (65.20%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE 
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTET 64

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
            DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+ RKK+K+ +DEQT  +KRRH
Sbjct: 65  NDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRH 124

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPS
Sbjct: 125 GYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALPS 184

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAAT+LPI+GT+  PKK+ KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ 
Sbjct: 185 HVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKHH 244

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Sbjct: 245 KYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK-------S 304

Query: 301 STSSKLKPNKKPQKKSMKK 320
             S KLKP K   KK   K
Sbjct: 305 GRSDKLKPKKDITKKPANK 316

[Close]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-30
Identity = 113/328 (34.45%), Postives = 178/328 (54.27%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LINQLWRLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     +  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K ++K  ++G S K K
Sbjct: 326 QEEAAKRRKMSQKGKRKGGRQGPSGKRK 324

[Close]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 113/328 (34.45%), Postives = 178/328 (54.27%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQL---LVNQLWQLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +
Sbjct: 146 RWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QM 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     +  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K +KK  ++G S + K
Sbjct: 326 QEEAAKRRKMSQKGKKKGGRQGPSGRRK 324

[Close]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 110/323 (34.06%), Postives = 176/323 (54.49%), Query Frame = 0


Query: 6   QLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDG 65
           +L+ DLG+L+A   NP   L     ++E  +    +  T+L   + N+L+ LP+    + 
Sbjct: 31  ELEFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQL---LINQLWQLPTERVEEA 90

Query: 66  PLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRHGYD 125
            + RLP P TRLPREK +P+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+RR GY 
Sbjct: 91  LVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQ 150

Query: 126 RANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQ 185
           RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  LPS   
Sbjct: 151 RARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS--- 210

Query: 186 LAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFL 245
             A  +  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK RKF 
Sbjct: 211 --AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQ 270

Query: 246 PVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTS 305
           P+    G  + ER+    +L  + SK     +++ +A N      ++ R+ D       +
Sbjct: 271 PLF---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATN------KQMREED---QEEAA 324

Query: 306 SKLKPNKKPQKKSMKKGVSNKGK 327
            + K ++K ++K  ++G  +K K
Sbjct: 331 KRRKMSQKGKRKGGRQGPGSKRK 324

[Close]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 114/328 (34.76%), Postives = 176/328 (53.66%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPST 60
           +  + +LQ DLG+L+A   NP   L     + E  +    +  T+L   + N+L+ LP+ 
Sbjct: 26  VHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQL---LINQLWQLPTE 85

Query: 61  EDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKR 120
              +  + RLP P TRLPREK LP+P+P T+W+ FA+ +GI+ +KK  + +DE +  W+R
Sbjct: 86  RVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRR 145

Query: 121 RHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGAL 180
           R GY RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  L
Sbjct: 146 RWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QL 205

Query: 181 PSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGK 240
           PS     A  L  TG Q      +K+ELG    +A  +TAS G+F  +L  EK P+  GK
Sbjct: 206 PS-----AAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGK 265

Query: 241 YRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP 300
            RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Sbjct: 266 KRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATN------KQMREED--- 324

Query: 301 SSSTSSKLKPNKKPQKKSMKKGVSNKGK 327
               + + K ++K ++K  ++G   K K
Sbjct: 326 QEEAAKRRKMSQKGKRKGGRQGPGGKRK 324

[Close]

BLAST of Moc06g06930 vs. ExPASy TrEMBL
Match: A0A6J1CSP0 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111014399 PE=3 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 2.9e-177
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH
Sbjct: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR
Sbjct: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Sbjct: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           STSSKLKPNKKPQKKSMKKGVSNKGKAK
Sbjct: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 328

[Close]

BLAST of Moc06g06930 vs. ExPASy TrEMBL
Match: A0A6J1HAS5 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111461680 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.5e-157
Identity = 296/329 (89.97%), Postives = 310/329 (94.22%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ A KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQAATKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KG+AK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGQAK 329

[Close]

BLAST of Moc06g06930 vs. ExPASy TrEMBL
Match: A0A6J1JJT9 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111485227 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.2e-156
Identity = 293/329 (89.06%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTED
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTREELVNECLQKGTELVQAIANELFILPSTED 60

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIKNRKKDKI YDEQTQTWKRRH
Sbjct: 61  RDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRGIKNRKKDKILYDEQTQTWKRRH 120

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPS
Sbjct: 121 GYDRANDEENIPIIEAKMTDEPGVDPFAKRQENKRKRVEKQENNRLQNLKQAAKVGALPS 180

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ   KK+TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYR
Sbjct: 181 HVQLAATALPITGTQATTKKITKDELGNVAGMAATATASGGKFDKKLPGEKPPKHEGKYR 240

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS 300
           KFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Sbjct: 241 KFLPVVEGTGVGSREREQTEKVLNRLISKNSHEILNINKAVNMYNVKREKRRKHDDRKPS 300

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           SSTSSKLKPNKK QKK +KKG S KGKAK
Sbjct: 301 SSTSSKLKPNKKLQKKPLKKGSSKKGKAK 329

[Close]

BLAST of Moc06g06930 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.2e-144
Identity = 271/328 (82.62%), Postives = 299/328 (91.16%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           +ENQ   Q+DLGHLMAFNPHH   S PSSRE+LV+ECLQKGTELVQ+IAN+LF LPSTED
Sbjct: 3   IENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTED 62

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPP TRLPREK LPKPKPPTKWELFA+K+GIKNRKKDK  YDEQT TWKRRH
Sbjct: 63  RDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRH 122

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDE+NIPIIEAKMTDE G DPFA R+++K+KRVEKQE NRLQNLKQAAKVGALPS
Sbjct: 123 GYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALPS 182

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           H+QLAATALPITGTQ APKK+TKDELGNVAGMAAT+TASGGKFD+K  GEKP KH+GKYR
Sbjct: 183 HIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGKYR 242

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           KFLPVVEGTG+GSREREQTE VL+RLISKNSHEILNVNKA+NMYNVK+EK++++ GK SS
Sbjct: 243 KFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQGK-SS 302

Query: 301 STSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           S SSKLKPNKK QKK +KKG S +GKAK
Sbjct: 303 SMSSKLKPNKKLQKKPLKKGSSKQGKAK 329

[Close]

BLAST of Moc06g06930 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.6e-143
Identity = 270/329 (82.07%), Postives = 298/329 (90.58%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           MENQQ  Q+DLG+LMAFNPHH   S  SSRE+LV+ECLQKG EL Q IAN+LF LPSTED
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTED 62

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
           RDGPLVRLPPP TRLPREK LPKPKPPTKWELFAKKRGIKNRKKDKI YD+QT +WKRRH
Sbjct: 63  RDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKRRH 122

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDRANDEENIPIIEAKMTDEPG+DPFA R++NK+ RVEKQE N+LQNLKQAAKVGALPS
Sbjct: 123 GYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPS 182

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAATALPITGTQ APKK+TKDELGNVAGMAAT+TASGGKFD+KL GEKP KH+GKYR
Sbjct: 183 HVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYR 242

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHD-GKPS 300
           KFLPVVEGTG+GS+EREQTE VLNRLISKNSHEILN+NKA+NMYNVK+EK++++  GK S
Sbjct: 243 KFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSS 302

Query: 301 SSTSSKLKPNKKPQKKSMKKGVSNKGKAK 329
           S +S+KLKPNKK QKK +KKG S  GKAK
Sbjct: 303 SMSSNKLKPNKKLQKKPLKKGSSKNGKAK 331

[Close]

BLAST of Moc06g06930 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 3.0e-110
Identity = 208/319 (65.20%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTED 60
           ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE 
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTET 64

Query: 61  RDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYDEQTQTWKRRH 120
            DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+ RKK+K+ +DEQT  +KRRH
Sbjct: 65  NDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRRH 124

Query: 121 GYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPS 180
           GYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPS
Sbjct: 125 GYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALPS 184

Query: 181 HVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYR 240
           HVQLAAT+LPI+GT+  PKK+ KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ 
Sbjct: 185 HVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKHH 244

Query: 241 KFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS 300
           K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Sbjct: 245 KYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKK-------S 304

Query: 301 STSSKLKPNKKPQKKSMKK 320
             S KLKP K   KK   K
Sbjct: 305 GRSDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of Moc06g06930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144805.1	6.0e-177	100.00	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]
XP_022961058.1	5.2e-157	89.97	ribosome biogenesis regulatory protein homolog [Cucurbita moschata]	[more]
XP_023515967.1	1.2e-156	89.97	ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp....	[more]
XP_022987784.1	1.7e-155	89.06	ribosome biogenesis regulatory protein homolog [Cucurbita maxima]	[more]
KAG6589856.1	2.4e-154	88.75	Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosp...	[more]

BLAST of Moc06g06930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	4.2e-109	65.20	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9CYH6	5.1e-30	34.45	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.1e-29	34.45	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q2KIH4	1.9e-29	34.06	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]
Q15050	1.9e-29	34.76	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]

BLAST of Moc06g06930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSP0	2.9e-177	100.00	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HAS5	2.5e-157	89.97	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JJT9	8.2e-156	89.06	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114852...	[more]
A0A0A0LZY0	7.2e-144	82.62	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A6J1HW20	3.6e-143	82.07	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]

BLAST of Moc06g06930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	3.0e-110	65.20	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 7..169 e-value: 7.5E-52 score: 175.5
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..89
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g06930.1	Moc06g06930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus