MS016975.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS016975.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor ORG2-like
Location	scaffold197: 142639 .. 143987 (+)
Sequence length	702
RNA-Seq Expression	MS016975.1
Synteny	MS016975.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGGTAACCGTTTAACTTGTGTTCTCATGATTCCATTATCTCGAAGTAAAGAATCAAAGACATACTAATTTCCAAGTAATATAATAGAACAAAATTCAGGAGCTGACCGGTTAGTACTCGTCTCCCTGTTGACCTATCACTAAAATTGTCAGTTCTTTATTTTCTAAAAAAGTTAAAAAAAATAAGAAGAAATTATATATTTCCTTTATCTATTCCTGCTCTTGTTTGTCAAAAGTTTAATAGTGCTAACCAGTAAGCAACTTAAGTATTATTCAATATAATATAGGATAAAACTCAAGTGCTTTTCAGTAAGCAGGTACTTTCATTGATGCATTGATTTTTACCCAACCTGAATTTAACTCAACCGTAATTGACACTCAGTTTTACCTATAATATATGATTTAAACTCACTAAATCTCTATATATCTATGATGACAACTTTTGTATCGAGAAAGAGAGAGAAAAAAATGTCTTTTGAGGGTAACTTGTCAAAAACTTTTAAATAACTCTTGTTGTGAAGTTACTAAAATGTCCTGCCCTAATGAATGGTTACCAACCATTTCTCTTTAGAGGTTCTTCCGGCCACCGTAGTTAGAAGCTCCAACCGATGATGGTTTTTTAGTTAACAATGGTGTTGTTTTTTCTCCCAGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

mRNA sequence

ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

Coding sequence (CDS)

ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

Protein sequence

MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHYPSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV

Homology

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BLAST of MS016975.1 vs. NCBI nr
Match: XP_022153926.1 (transcription factor bHLH101-like isoform X1 [Momordica charantia])

HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-120
Identity = 231/234 (98.72%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 234

[Close]

BLAST of MS016975.1 vs. NCBI nr
Match: XP_022153928.1 (transcription factor bHLH101-like isoform X2 [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.5e-118
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM KLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM-KLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 233

[Close]

BLAST of MS016975.1 vs. NCBI nr
Match: XP_022932848.1 (transcription factor ORG2-like [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-92
Identity = 187/234 (79.91%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNSLFPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSLFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+SSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLVLLNASSFESFDGKVFHNLHLQM 233

[Close]

BLAST of MS016975.1 vs. NCBI nr
Match: XP_023543484.1 (transcription factor ORG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 189/235 (80.43%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASD-SFHLHQFPPPPPLQPPPFELDH 60
           MLAVSSPLFS  QWPLEDPISL++HHNS FPP E SD SF+LH FPPPPPLQPP  +LDH
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSPFPPFEPSDNSFYLH-FPPPPPLQPPHVDLDH 60

Query: 61  YPSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPAT 120
           YPSS TPSP   A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPAT
Sbjct: 61  YPSSATPSPKAGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPAT 120

Query: 121 ISRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVS 180
           ISRILSYIPELQQQVEGLMRKKEELM AM GQEV+  +E+K  KCAA+SSSS++S SR+ 
Sbjct: 121 ISRILSYIPELQQQVEGLMRKKEELMAAMVGQEVKSDKEKKT-KCAATSSSSIVSTSRLG 180

Query: 181 QQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           Q+EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 QREMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 233

[Close]

BLAST of MS016975.1 vs. NCBI nr
Match: KAG7033594.1 (Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-91
Identity = 186/234 (79.49%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNS FPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSPFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP GSA VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGSANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+S SS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSFSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 233

[Close]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 83/188 (44.15%), Postives = 128/188 (68.09%), Query Frame = 0


Query: 52  PPPFELDHYPSS---TTPSPGGSATVSK-MAKKLSHNASERDRRKKINSLYSSLRALLPS 111
           P  +E+ H+ +S   +  S G     +  + KKL+HNASERDRRKKIN+L+SSLR+ LP+
Sbjct: 41  PQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPA 100

Query: 112 ADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQ-EVEGGEERKAKKCAA 171
           +DQ KKLS P T+S+ L YIPELQQQV+ L++KKEE++  ++GQ + E  ++++ K  A 
Sbjct: 101 SDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPK--AV 160

Query: 172 SSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKV 231
           +S  S +SA+R+   E+ VQ+S+  S  H  S+S +L  +EE+G  L++ SS  +   ++
Sbjct: 161 ASYLSTVSATRLGDNEVMVQVSS--SKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERL 220

Query: 232 FHNLHVQV 235
           F+ LH+QV
Sbjct: 221 FYTLHLQV 224

[Close]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-27
Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+KINSL+SSLR+ LP++ Q KKLS PAT+SR L YIPELQ+QV+ 
Sbjct: 75  VVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKK 134

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHR 196
           L++KKEEL+  ++GQ       ++  K  A+  S+V SA+R+   E+ VQIS+  S  H 
Sbjct: 135 LIKKKEELLVQISGQRNTECYVKQPPKAVANYISTV-SATRLGDNEVMVQISS--SKIHN 194

Query: 197 NSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            S+S +L  LEE+   L++ SS  +   ++F+ LH+QV
Sbjct: 195 FSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

[Close]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 70/157 (44.59%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q KKLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 71/159 (44.65%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+K+N+LYSSLRALLP +DQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSV-ISASRVSQQEMAVQISTDISDGH 196
           L R+KEEL+  ++ +  +     KA   +  SSSS  I+A+ ++  E+AVQI+T      
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 197 RNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
             S+S++L+ LEE GL++++ SS  +   ++F+ LH+Q+
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

[Close]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 73/169 (43.20%), Postives = 106/169 (62.72%), Query Frame = 0


Query: 67  SPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSY 126
           S G  +  S   +KLSHNA ERDRRK++N LYSSLRALLP AD  KKLS P T+SR+L Y
Sbjct: 57  SSGYGSGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKY 116

Query: 127 IPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQ 186
           IPELQ+QVE L RKK+EL    T     G       +  +   + ++SA+ ++  E+ VQ
Sbjct: 117 IPELQKQVENLERKKKELTTTSTTNCKPG---VLGSQLMSEGMAPIVSATCINDMEIMVQ 176

Query: 187 IS--TDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ 234
           +S  ++++ G    LS+ +  LE EGL  +++S+   F  + F+++H+Q
Sbjct: 177 VSLLSNVA-GSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQ 221

[Close]

BLAST of MS016975.1 vs. ExPASy TrEMBL
Match: A0A6J1DM57 (transcription factor bHLH101-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021327 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 231/234 (98.72%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 234

[Close]

BLAST of MS016975.1 vs. ExPASy TrEMBL
Match: A0A6J1DIV6 (transcription factor bHLH101-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021327 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM KLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM-KLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 233

[Close]

BLAST of MS016975.1 vs. ExPASy TrEMBL
Match: A0A6J1F2W7 (transcription factor ORG2-like OS=Cucurbita moschata OX=3662 GN=LOC111439389 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.2e-93
Identity = 187/234 (79.91%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNSLFPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSLFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+SSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLVLLNASSFESFDGKVFHNLHLQM 233

[Close]

BLAST of MS016975.1 vs. ExPASy TrEMBL
Match: A0A6J1HY06 (transcription factor ORG2-like OS=Cucurbita maxima OX=3661 GN=LOC111467265 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.3e-91
Identity = 188/234 (80.34%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL HHH+SLFPP E SD+    QFP PPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISL-HHHSSLFPPFEPSDNSFYLQFPTPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM GQEV+  +E+K  KCAASSSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGQEVKSEKEKKT-KCAASSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 232

[Close]

BLAST of MS016975.1 vs. ExPASy TrEMBL
Match: A0A0A0L0Z2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G434480 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 4.1e-85
Identity = 181/234 (77.35%), Postives = 196/234 (83.76%), Query Frame = 0


Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQW  EDPISL+H HNSLF P E SD     QF PPPPL P   E DHY
Sbjct: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQF-PPPPLDPSHGEHDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS  PSP G + VSKMAKKLSHNASERDRRKKINSLYSSLRALLPS+DQMKKLSNPATI
Sbjct: 61  PSSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVE  MRKKEELM AM GQEV+  EE+K K  A SSSSS+ISASR+S+
Sbjct: 121 SRILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKS-AVSSSSSIISASRLSR 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            EMA+QISTDI+ G RN LSEIL+ LEEEGL LLNASSFE+FDGK+FHNLH+Q+
Sbjct: 181 HEMAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQI 232

[Close]

BLAST of MS016975.1 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 83/188 (44.15%), Postives = 128/188 (68.09%), Query Frame = 0


Query: 52  PPPFELDHYPSS---TTPSPGGSATVSK-MAKKLSHNASERDRRKKINSLYSSLRALLPS 111
           P  +E+ H+ +S   +  S G     +  + KKL+HNASERDRRKKIN+L+SSLR+ LP+
Sbjct: 41  PQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPA 100

Query: 112 ADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQ-EVEGGEERKAKKCAA 171
           +DQ KKLS P T+S+ L YIPELQQQV+ L++KKEE++  ++GQ + E  ++++ K  A 
Sbjct: 101 SDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPK--AV 160

Query: 172 SSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKV 231
           +S  S +SA+R+   E+ VQ+S+  S  H  S+S +L  +EE+G  L++ SS  +   ++
Sbjct: 161 ASYLSTVSATRLGDNEVMVQVSS--SKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERL 220

Query: 232 FHNLHVQV 235
           F+ LH+QV
Sbjct: 221 FYTLHLQV 224

[Close]

BLAST of MS016975.1 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-28
Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+KINSL+SSLR+ LP++ Q KKLS PAT+SR L YIPELQ+QV+ 
Sbjct: 75  VVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKK 134

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHR 196
           L++KKEEL+  ++GQ       ++  K  A+  S+V SA+R+   E+ VQIS+  S  H 
Sbjct: 135 LIKKKEELLVQISGQRNTECYVKQPPKAVANYISTV-SATRLGDNEVMVQISS--SKIHN 194

Query: 197 NSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            S+S +L  LEE+   L++ SS  +   ++F+ LH+QV
Sbjct: 195 FSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

[Close]

BLAST of MS016975.1 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 70/157 (44.59%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q KKLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of MS016975.1 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 71/159 (44.65%), Postives = 113/159 (71.07%), Query Frame = 0


Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+K+N+LYSSLRALLP +DQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSV-ISASRVSQQEMAVQISTDISDGH 196
           L R+KEEL+  ++ +  +     KA   +  SSSS  I+A+ ++  E+AVQI+T      
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 197 RNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
             S+S++L+ LEE GL++++ SS  +   ++F+ LH+Q+
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

[Close]

BLAST of MS016975.1 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 69/157 (43.95%), Postives = 110/157 (70.06%), Query Frame = 0


Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q  KLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQ-TKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 215

The following BLAST results are available for this feature:

BLAST of MS016975.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153926.1	4.8e-120	98.72	transcription factor bHLH101-like isoform X1 [Momordica charantia]	[more]
XP_022153928.1	4.5e-118	98.29	transcription factor bHLH101-like isoform X2 [Momordica charantia]	[more]
XP_022932848.1	1.9e-92	79.91	transcription factor ORG2-like [Cucurbita moschata]	[more]
XP_023543484.1	1.2e-91	80.43	transcription factor ORG2-like [Cucurbita pepo subsp. pepo]	[more]
KAG7033594.1	2.1e-91	79.49	Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS016975.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1K1	2.2e-27	44.15	Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1	[more]
Q9M1K0	4.9e-27	49.37	Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1	[more]
Q9ZVB5	2.1e-25	44.59	Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=...	[more]
Q9FYE6	2.1e-25	44.65	Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=...	[more]
A2WZ60	2.5e-23	43.20	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]

BLAST of MS016975.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DM57	2.3e-120	98.72	transcription factor bHLH101-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1DIV6	2.2e-118	98.29	transcription factor bHLH101-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1F2W7	9.2e-93	79.91	transcription factor ORG2-like OS=Cucurbita moschata OX=3662 GN=LOC111439389 PE=...	[more]
A0A6J1HY06	2.3e-91	80.34	transcription factor ORG2-like OS=Cucurbita maxima OX=3661 GN=LOC111467265 PE=4 ...	[more]
A0A0A0L0Z2	4.1e-85	77.35	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G434480 PE=4 S...	[more]

BLAST of MS016975.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56970.1	1.6e-28	44.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56980.1	3.5e-28	49.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.1	1.5e-26	44.59	basic helix-loop-helix protein 100	[more]
AT5G04150.1	1.5e-26	44.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.2	1.1e-24	43.95	basic helix-loop-helix protein 100	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80
None	No IPR available	PANTHER	PTHR13935:SF41	TRANSCRIPTION FACTOR ORG2-RELATED	coord: 1..232
None	No IPR available	CDD	cd18914	bHLH_AtORG2_like	coord: 79..155 e-value: 1.19631E-25 score: 93.5219
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 84..136 e-value: 6.3E-10 score: 49.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 79..131 e-value: 4.1E-12 score: 45.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 78..130 score: 14.373281
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 70..157 e-value: 9.1E-17 score: 62.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 79..149
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 1..232

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS016975	MS016975	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS016975.1-cds	MS016975.1-cds-scaffold197:142639..142971	CDS
MS016975.1-cds	MS016975.1-cds-scaffold197:143619..143987	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS016975.1	MS016975.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity