MS016975 (gene) Bitter gourd (TR) v1

Overview
NameMS016975
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor ORG2-like
Locationscaffold197: 142639 .. 143987 (+)
RNA-Seq ExpressionMS016975
SyntenyMS016975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGGTAACCGTTTAACTTGTGTTCTCATGATTCCATTATCTCGAAGTAAAGAATCAAAGACATACTAATTTCCAAGTAATATAATAGAACAAAATTCAGGAGCTGACCGGTTAGTACTCGTCTCCCTGTTGACCTATCACTAAAATTGTCAGTTCTTTATTTTCTAAAAAAGTTAAAAAAAATAAGAAGAAATTATATATTTCCTTTATCTATTCCTGCTCTTGTTTGTCAAAAGTTTAATAGTGCTAACCAGTAAGCAACTTAAGTATTATTCAATATAATATAGGATAAAACTCAAGTGCTTTTCAGTAAGCAGGTACTTTCATTGATGCATTGATTTTTACCCAACCTGAATTTAACTCAACCGTAATTGACACTCAGTTTTACCTATAATATATGATTTAAACTCACTAAATCTCTATATATCTATGATGACAACTTTTGTATCGAGAAAGAGAGAGAAAAAAATGTCTTTTGAGGGTAACTTGTCAAAAACTTTTAAATAACTCTTGTTGTGAAGTTACTAAAATGTCCTGCCCTAATGAATGGTTACCAACCATTTCTCTTTAGAGGTTCTTCCGGCCACCGTAGTTAGAAGCTCCAACCGATGATGGTTTTTTAGTTAACAATGGTGTTGTTTTTTCTCCCAGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

mRNA sequence

ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

Coding sequence (CDS)

ATGTTGGCTGTTTCCTCTCCTTTGTTTTCTCCTCATCAATGGCCTTTGGAAGATCCCATCTCTCTCAATCACCATCACAACTCTCTCTTCCCTCCCATTGAAGCTTCTGATTCCTTTCACCTTCATCAGTTCCCTCCGCCACCGCCGTTGCAACCACCGCCCTTCGAGCTCGACCACTATCCCTCCTCCACTACTCCATCGCCAGGAGGCAGCGCCACGGTCTCGAAGATGGCTAAGAAGCTTAGCCATAATGCAAGCGAGCGGGATCGTCGAAAGAAGATCAACTCTCTCTACTCCTCTTTGCGCGCCCTCCTTCCCTCCGCTGATCAAATGAAGAAGCTGAGTAACCCGGCGACGATTTCGAGGATATTGAGCTACATACCGGAGCTACAACAGCAAGTCGAGGGGCTGATGAGGAAGAAAGAAGAGCTTATGGGAGCCATGACTGGACAGGAAGTTGAGGGTGGTGAAGAGAGGAAAGCAAAGAAATGCGCAGCTTCGAGCTCCTCATCGGTCATTTCGGCAAGTCGGGTCAGTCAACAGGAAATGGCGGTTCAAATATCGACCGATATTAGCGACGGTCACCGGAATTCCTTGTCGGAGATCTTGGTTTGGTTGGAGGAAGAAGGTCTTTCTTTGTTGAATGCTTCTTCTTTTGAGACTTTTGATGGGAAGGTTTTCCATAATTTGCATGTTCAGGTA

Protein sequence

MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHYPSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV
Homology
BLAST of MS016975 vs. NCBI nr
Match: XP_022153926.1 (transcription factor bHLH101-like isoform X1 [Momordica charantia])

HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-120
Identity = 231/234 (98.72%), Postives = 233/234 (99.57%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 234

BLAST of MS016975 vs. NCBI nr
Match: XP_022153928.1 (transcription factor bHLH101-like isoform X2 [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.5e-118
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM KLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM-KLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 233

BLAST of MS016975 vs. NCBI nr
Match: XP_022932848.1 (transcription factor ORG2-like [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-92
Identity = 187/234 (79.91%), Postives = 207/234 (88.46%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNSLFPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSLFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+SSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLVLLNASSFESFDGKVFHNLHLQM 233

BLAST of MS016975 vs. NCBI nr
Match: XP_023543484.1 (transcription factor ORG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91
Identity = 189/235 (80.43%), Postives = 209/235 (88.94%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASD-SFHLHQFPPPPPLQPPPFELDH 60
           MLAVSSPLFS  QWPLEDPISL++HHNS FPP E SD SF+LH FPPPPPLQPP  +LDH
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSPFPPFEPSDNSFYLH-FPPPPPLQPPHVDLDH 60

Query: 61  YPSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPAT 120
           YPSS TPSP   A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPAT
Sbjct: 61  YPSSATPSPKAGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPAT 120

Query: 121 ISRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVS 180
           ISRILSYIPELQQQVEGLMRKKEELM AM GQEV+  +E+K  KCAA+SSSS++S SR+ 
Sbjct: 121 ISRILSYIPELQQQVEGLMRKKEELMAAMVGQEVKSDKEKKT-KCAATSSSSIVSTSRLG 180

Query: 181 QQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           Q+EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 QREMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 233

BLAST of MS016975 vs. NCBI nr
Match: KAG7033594.1 (Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-91
Identity = 186/234 (79.49%), Postives = 206/234 (88.03%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNS FPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSPFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP GSA VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGSANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+S SS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSFSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 233

BLAST of MS016975 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 83/188 (44.15%), Postives = 128/188 (68.09%), Query Frame = 0

Query: 52  PPPFELDHYPSS---TTPSPGGSATVSK-MAKKLSHNASERDRRKKINSLYSSLRALLPS 111
           P  +E+ H+ +S   +  S G     +  + KKL+HNASERDRRKKIN+L+SSLR+ LP+
Sbjct: 41  PQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPA 100

Query: 112 ADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQ-EVEGGEERKAKKCAA 171
           +DQ KKLS P T+S+ L YIPELQQQV+ L++KKEE++  ++GQ + E  ++++ K  A 
Sbjct: 101 SDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPK--AV 160

Query: 172 SSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKV 231
           +S  S +SA+R+   E+ VQ+S+  S  H  S+S +L  +EE+G  L++ SS  +   ++
Sbjct: 161 ASYLSTVSATRLGDNEVMVQVSS--SKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERL 220

Query: 232 FHNLHVQV 235
           F+ LH+QV
Sbjct: 221 FYTLHLQV 224

BLAST of MS016975 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-27
Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 0

Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+KINSL+SSLR+ LP++ Q KKLS PAT+SR L YIPELQ+QV+ 
Sbjct: 75  VVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKK 134

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHR 196
           L++KKEEL+  ++GQ       ++  K  A+  S+V SA+R+   E+ VQIS+  S  H 
Sbjct: 135 LIKKKEELLVQISGQRNTECYVKQPPKAVANYISTV-SATRLGDNEVMVQISS--SKIHN 194

Query: 197 NSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            S+S +L  LEE+   L++ SS  +   ++F+ LH+QV
Sbjct: 195 FSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

BLAST of MS016975 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 70/157 (44.59%), Postives = 111/157 (70.70%), Query Frame = 0

Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q KKLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

BLAST of MS016975 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 71/159 (44.65%), Postives = 113/159 (71.07%), Query Frame = 0

Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+K+N+LYSSLRALLP +DQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSV-ISASRVSQQEMAVQISTDISDGH 196
           L R+KEEL+  ++ +  +     KA   +  SSSS  I+A+ ++  E+AVQI+T      
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 197 RNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
             S+S++L+ LEE GL++++ SS  +   ++F+ LH+Q+
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

BLAST of MS016975 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 73/169 (43.20%), Postives = 106/169 (62.72%), Query Frame = 0

Query: 67  SPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSY 126
           S G  +  S   +KLSHNA ERDRRK++N LYSSLRALLP AD  KKLS P T+SR+L Y
Sbjct: 57  SSGYGSGGSGSHRKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKY 116

Query: 127 IPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQ 186
           IPELQ+QVE L RKK+EL    T     G       +  +   + ++SA+ ++  E+ VQ
Sbjct: 117 IPELQKQVENLERKKKELTTTSTTNCKPG---VLGSQLMSEGMAPIVSATCINDMEIMVQ 176

Query: 187 IS--TDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ 234
           +S  ++++ G    LS+ +  LE EGL  +++S+   F  + F+++H+Q
Sbjct: 177 VSLLSNVA-GSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQ 221

BLAST of MS016975 vs. ExPASy TrEMBL
Match: A0A6J1DM57 (transcription factor bHLH101-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021327 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 231/234 (98.72%), Postives = 233/234 (99.57%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 234

BLAST of MS016975 vs. ExPASy TrEMBL
Match: A0A6J1DIV6 (transcription factor bHLH101-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021327 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQF PPPPLQPPPFELDHY
Sbjct: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFAPPPPLQPPPFELDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM KLSNPATI
Sbjct: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQM-KLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           QEMAVQISTDI+DGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQ+
Sbjct: 181 QEMAVQISTDINDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQM 233

BLAST of MS016975 vs. ExPASy TrEMBL
Match: A0A6J1F2W7 (transcription factor ORG2-like OS=Cucurbita moschata OX=3662 GN=LOC111439389 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.2e-93
Identity = 187/234 (79.91%), Postives = 207/234 (88.46%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL++HHNSLFPP E SD+    QFPPPPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISLHNHHNSLFPPFEPSDNSFYLQFPPPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM G EV+  +E+K  KCAA+SSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGHEVKSDKEKKT-KCAATSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLVLLNASSFESFDGKVFHNLHLQM 233

BLAST of MS016975 vs. ExPASy TrEMBL
Match: A0A6J1HY06 (transcription factor ORG2-like OS=Cucurbita maxima OX=3661 GN=LOC111467265 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.3e-91
Identity = 188/234 (80.34%), Postives = 206/234 (88.03%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFS  QWPLEDPISL HHH+SLFPP E SD+    QFP PPPLQPP  +LDHY
Sbjct: 1   MLAVSSPLFSTLQWPLEDPISL-HHHSSLFPPFEPSDNSFYLQFPTPPPLQPPHVDLDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS TPSP G A VSKMAKKL+HNASERDRRKKINSLYSSLR+LLPS DQMKKLSNPATI
Sbjct: 61  PSSATPSPKGGANVSKMAKKLNHNASERDRRKKINSLYSSLRSLLPSTDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVEGLMRKKEELM AM GQEV+  +E+K  KCAASSSSS++S SR+ Q
Sbjct: 121 SRILSYIPELQQQVEGLMRKKEELMAAMVGQEVKSEKEKKT-KCAASSSSSIVSTSRLGQ 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           +EMA+QISTDI+ GH+NSLSEILV LEEEGL LLNASSFE+FDGKVFHNLH+Q+
Sbjct: 181 REMAIQISTDINGGHQNSLSEILVCLEEEGLLLLNASSFESFDGKVFHNLHLQM 232

BLAST of MS016975 vs. ExPASy TrEMBL
Match: A0A0A0L0Z2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G434480 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 4.1e-85
Identity = 181/234 (77.35%), Postives = 196/234 (83.76%), Query Frame = 0

Query: 1   MLAVSSPLFSPHQWPLEDPISLNHHHNSLFPPIEASDSFHLHQFPPPPPLQPPPFELDHY 60
           MLAVSSPLFSPHQW  EDPISL+H HNSLF P E SD     QF PPPPL P   E DHY
Sbjct: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQF-PPPPLDPSHGEHDHY 60

Query: 61  PSSTTPSPGGSATVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATI 120
           PSS  PSP G + VSKMAKKLSHNASERDRRKKINSLYSSLRALLPS+DQMKKLSNPATI
Sbjct: 61  PSSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATI 120

Query: 121 SRILSYIPELQQQVEGLMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQ 180
           SRILSYIPELQQQVE  MRKKEELM AM GQEV+  EE+K K  A SSSSS+ISASR+S+
Sbjct: 121 SRILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKS-AVSSSSSIISASRLSR 180

Query: 181 QEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            EMA+QISTDI+ G RN LSEIL+ LEEEGL LLNASSFE+FDGK+FHNLH+Q+
Sbjct: 181 HEMAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQI 232

BLAST of MS016975 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 83/188 (44.15%), Postives = 128/188 (68.09%), Query Frame = 0

Query: 52  PPPFELDHYPSS---TTPSPGGSATVSK-MAKKLSHNASERDRRKKINSLYSSLRALLPS 111
           P  +E+ H+ +S   +  S G     +  + KKL+HNASERDRRKKIN+L+SSLR+ LP+
Sbjct: 41  PQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPA 100

Query: 112 ADQMKKLSNPATISRILSYIPELQQQVEGLMRKKEELMGAMTGQ-EVEGGEERKAKKCAA 171
           +DQ KKLS P T+S+ L YIPELQQQV+ L++KKEE++  ++GQ + E  ++++ K  A 
Sbjct: 101 SDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPK--AV 160

Query: 172 SSSSSVISASRVSQQEMAVQISTDISDGHRNSLSEILVWLEEEGLSLLNASSFETFDGKV 231
           +S  S +SA+R+   E+ VQ+S+  S  H  S+S +L  +EE+G  L++ SS  +   ++
Sbjct: 161 ASYLSTVSATRLGDNEVMVQVSS--SKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERL 220

Query: 232 FHNLHVQV 235
           F+ LH+QV
Sbjct: 221 FYTLHLQV 224

BLAST of MS016975 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-28
Identity = 78/158 (49.37%), Postives = 111/158 (70.25%), Query Frame = 0

Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+KINSL+SSLR+ LP++ Q KKLS PAT+SR L YIPELQ+QV+ 
Sbjct: 75  VVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKK 134

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHR 196
           L++KKEEL+  ++GQ       ++  K  A+  S+V SA+R+   E+ VQIS+  S  H 
Sbjct: 135 LIKKKEELLVQISGQRNTECYVKQPPKAVANYISTV-SATRLGDNEVMVQISS--SKIHN 194

Query: 197 NSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
            S+S +L  LEE+   L++ SS  +   ++F+ LH+QV
Sbjct: 195 FSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 229

BLAST of MS016975 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 70/157 (44.59%), Postives = 111/157 (70.70%), Query Frame = 0

Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q KKLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

BLAST of MS016975 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 71/159 (44.65%), Postives = 113/159 (71.07%), Query Frame = 0

Query: 77  MAKKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEG 136
           + KKL+HNASERDRR+K+N+LYSSLRALLP +DQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 137 LMRKKEELMGAMTGQEVEGGEERKAKKCAASSSSSV-ISASRVSQQEMAVQISTDISDGH 196
           L R+KEEL+  ++ +  +     KA   +  SSSS  I+A+ ++  E+AVQI+T      
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 197 RNSLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
             S+S++L+ LEE GL++++ SS  +   ++F+ LH+Q+
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQM 218

BLAST of MS016975 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 69/157 (43.95%), Postives = 110/157 (70.06%), Query Frame = 0

Query: 79  KKLSHNASERDRRKKINSLYSSLRALLPSADQMKKLSNPATISRILSYIPELQQQVEGLM 138
           KKL+HNASER+RRKKIN+++SSLR+ LP  +Q  KLS  AT+S+ L YIPELQ+QV+ LM
Sbjct: 62  KKLNHNASERERRKKINTMFSSLRSCLPPTNQ-TKLSVSATVSQALKYIPELQEQVKKLM 121

Query: 139 RKKEELMGAMTGQ-EVEGGEERKAKKCAASSSSSVISASRVSQQEMAVQISTDISDGHRN 198
           +KKEEL   ++GQ ++   ++    +   +S +S +S++R+S+ E+ VQIS+      + 
Sbjct: 122 KKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKC 181

Query: 199 SLSEILVWLEEEGLSLLNASSFETFDGKVFHNLHVQV 235
           S   +L  +EE+GL L+ ASS  +   ++F+++H+Q+
Sbjct: 182 SFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153926.14.8e-12098.72transcription factor bHLH101-like isoform X1 [Momordica charantia][more]
XP_022153928.14.5e-11898.29transcription factor bHLH101-like isoform X2 [Momordica charantia][more]
XP_022932848.11.9e-9279.91transcription factor ORG2-like [Cucurbita moschata][more]
XP_023543484.11.2e-9180.43transcription factor ORG2-like [Cucurbita pepo subsp. pepo][more]
KAG7033594.12.1e-9179.49Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Q9M1K12.2e-2744.15Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1[more]
Q9M1K04.9e-2749.37Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1[more]
Q9ZVB52.1e-2544.59Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=... [more]
Q9FYE62.1e-2544.65Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=... [more]
A2WZ602.5e-2343.20Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399... [more]
Match NameE-valueIdentityDescription
A0A6J1DM572.3e-12098.72transcription factor bHLH101-like isoform X1 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1DIV62.2e-11898.29transcription factor bHLH101-like isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1F2W79.2e-9379.91transcription factor ORG2-like OS=Cucurbita moschata OX=3662 GN=LOC111439389 PE=... [more]
A0A6J1HY062.3e-9180.34transcription factor ORG2-like OS=Cucurbita maxima OX=3661 GN=LOC111467265 PE=4 ... [more]
A0A0A0L0Z24.1e-8577.35BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G434480 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G56970.11.6e-2844.15basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT3G56980.13.5e-2849.37basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G41240.11.5e-2644.59basic helix-loop-helix protein 100 [more]
AT5G04150.11.5e-2644.65basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G41240.21.1e-2443.95basic helix-loop-helix protein 100 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..80
NoneNo IPR availablePANTHERPTHR13935:SF41TRANSCRIPTION FACTOR ORG2-RELATEDcoord: 1..232
NoneNo IPR availableCDDcd18914bHLH_AtORG2_likecoord: 79..155
e-value: 1.19631E-25
score: 93.5219
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 84..136
e-value: 6.3E-10
score: 49.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 79..131
e-value: 4.1E-12
score: 45.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 78..130
score: 14.373281
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 70..157
e-value: 9.1E-17
score: 62.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 79..149
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016975.1MS016975.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity