Sequences
The following sequences are available for this feature:
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCACCTCCCAAGAAAATTTGGAACCGTTTGGCCTCCAAAGTGATATCGAAGCTGAGCCGTTTTCCGAGGCCCGAGGCCATAACCAGAACCACGCGCCGCCTTCTGGGCCGCCTCGGCACCGCCGACCCCGCCGGAGACCACCGCGGGCTCTGCCGCTGCAGCTGCCACCGGCTGCAGGTGTACCGGAGCTTTTTGAATAATGGGTTGCAAGTTGAGGGGGAAGAAGATCGAGGCGGTGAAAATGGGGAGTTTGTTGAAGATGATCTTGCTGTGGATGAAAGGGCTGAGGAGTTTATTGCTAAGTTCCATGAAAGTTTGAAGCTTGAAAGATTGCAACATTTT
ATGCTTCCACCTCCCAAGAAAATTTGGAACCGTTTGGCCTCCAAAGTGATATCGAAGCTGAGCCGTTTTCCGAGGCCCGAGGCCATAACCAGAACCACGCGCCGCCTTCTGGGCCGCCTCGGCACCGCCGACCCCGCCGGAGACCACCGCGGGCTCTGCCGCTGCAGCTGCCACCGGCTGCAGGTGTACCGGAGCTTTTTGAATAATGGGTTGCAAGTTGAGGGGGAAGAAGATCGAGGCGGTGAAAATGGGGAGTTTGTTGAAGATGATCTTGCTGTGGATGAAAGGGCTGAGGAGTTTATTGCTAAGTTCCATGAAAGTTTGAAGCTTGAAAGATTGCAACATTTT
ATGCTTCCACCTCCCAAGAAAATTTGGAACCGTTTGGCCTCCAAAGTGATATCGAAGCTGAGCCGTTTTCCGAGGCCCGAGGCCATAACCAGAACCACGCGCCGCCTTCTGGGCCGCCTCGGCACCGCCGACCCCGCCGGAGACCACCGCGGGCTCTGCCGCTGCAGCTGCCACCGGCTGCAGGTGTACCGGAGCTTTTTGAATAATGGGTTGCAAGTTGAGGGGGAAGAAGATCGAGGCGGTGAAAATGGGGAGTTTGTTGAAGATGATCTTGCTGTGGATGAAAGGGCTGAGGAGTTTATTGCTAAGTTCCATGAAAGTTTGAAGCTTGAAAGATTGCAACATTTT
MLPPPKKIWNRLASKVISKLSRFPRPEAITRTTRRLLGRLGTADPAGDHRGLCRCSCHRLQVYRSFLNNGLQVEGEEDRGGENGEFVEDDLAVDERAEEFIAKFHESLKLERLQHF
Homology
BLAST of MS008113.1 vs. NCBI nr
Match:
KGN44055.1 (hypothetical protein Csa_015429 [Cucumis sativus])
HSP 1 Score: 118.6 bits (296), Expect = 3.5e-23
Identity = 76/124 (61.29%), Postives = 86/124 (69.35%), Query Frame = 0
BLAST of MS008113.1 vs. ExPASy TrEMBL
Match:
A0A0A0K332 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 76/124 (61.29%), Postives = 86/124 (69.35%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KGN44055.1 3.5e-23 61.29 hypothetical protein Csa_015429 [Cucumis sativus] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A0A0K332 1.7e-23 61.29 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
A T G C T T C C A C C T C C C A A G A A A A T T T G G A A C C G T T T G G C C T C C A A A G T G A T A T C G A A G C T G A G C C G T T T T C C G A G G C C C G A G G C C A T A A C C A G A A C C A C G C G C C G C C T T C T G G G C C G C C T C G G C A C C G C C G A C C C C G C C G G A G A C C A C C G C G G G C T C T G C C G C T G C A G C T G C C A C C G G C T G C A G G T G T A C C G G A G C T T T T T G A A T A A T G G G T T G C A A G T T G A G G G G G A A G A A G A T C G A G G C G G T G A A A A T G G G G A G T T T G T T G A A G A T G A T C T T G C T G T G G A T G A A A G G G C T G A G G A G T T T A T T G C T A A G T T C C A T G A A A G T T T G A A G C T T G A A A G A T T G C A A C A T T T T 50 100 150 200 250 300 Expect = 7.0E-10 / Score = 38.3 Sequence PF05553
IPR Term IPR Description Source Source Term Source Description Alignment
IPR008480 Protein of unknown function DUF761, plant PFAM PF05553 DUF761 coord: 92..114
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name Unique Name Type
MS008113 MS008113 gene
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Type
MS008113.1-cds MS008113.1-cds-scaffold703:292916..293263 CDS
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Type
MS008113.1 MS008113.1-protein polypeptide
