MS004282.1 (mRNA) Bitter gourd (TR) v1

InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGGGGAGCGACACGCAGGAGGATGTTGGAGAAGGCAAAACAAAAGATGGAAAATCCAATATATGCCCGGAATGTGGCGCTGCTTTCAAAAAGCCTGCTTACTTGAGGCAGCATATGCTAAGCCATTCGCTCGAGAGGCCATACATCTGCTCAATAGATGGTTGTCAAGCCAGTTATAGAAGAAAGGATCATTTGACTCGCCACTTACTCCAACATCAAGGAAATGTATTCAAGTGTCCAATTGAGAGCTGCAGCAATGAATTTGCAAGTCAAGACAGTTTGAAAAGACACTTGAAAAATTTCCATGAAGATGATGCTCGTCCTGAAGCTAAATGTGAGAAGCAGTTTGTTTGTCCAGAAGATGGATGTGGAAAGGTGTTCAGATATGGATCTCAATTGCAAAAACATGAGGATTCCCATAAGATATCAATGTATTTATTCAAATTTTACTTAACTGTAGTTAAGCTGGATTCAATAGAGGCATATTGTGCTGAACCGGGTTGCATGCGACCTTTCACCAACAAGCAATGTCTTAAGGCTCATATACAATCCTGTCACCAATATATTAAATGTGAGATATGTGGATCTGAAAAATTGAGGAAGAACATCAAACGACATCTACGTAAGCATGAAAGTGAAGGTCCACAAAAGACAATTCAATGCTCGCATGAGGGCTGTAGTAAAGTGTTTTCAACTGATTCAAATCTCCGCCAACATATGAAGGTTGTGCACCTGGAACAAAAACCTTTTTCGTGTAGCTTTTCTGGTTGTGGCATGAGATTTGGGTACAGGCATGTTAGAGACAATCACGAGAGAAGTGGCCACCATGTTTACATTAATGGGGATTTTGAAGTAGCTGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGGAAGTGTCCAACCGTTGAAATGCTCATACGAAAGAGGGTTACCCCCCCAAGTGAGTTGGACTTCATGTTGAAT100200300400500600700800900Expect = 0.01 / Score = 25.0Expect = 0.0012 / Score = 28.1Expect = 0.0048 / Score = 26.1Expect = 0.0012 / Score = 28.1Expect = 6.9 / Score = 14.7Expect = 10.0 / Score = 13.1Expect = 1.6E-4 / Score = 31.0Expect = 2.3 / Score = 17.2Expect = 4.7E-4 / Score = 20.5Expect = 0.0049 / Score = 17.3Expect = 0.0013 / Score = 19.1Expect = 2.2E-4 / Score = 21.5Score = Score = Score = Score = Score = Score = Score = 12.715416Score = 13.338909Score = 9.286205Score = 10.782589Score = 10.678673Expect = 2.4E-7 / Score = 32.6Expect = 3.3E-9 / Score = 38.4Expect = 5.2E-8 / Score = 34.4Expect = 1.2E-10 / Score = 43.4Expect = 8.0E-6 / Score = 27.4Score = Score = Score = Score = Score = SequenceSM00355PF00096PS00028PS00028PS00028PS00028PS00028PS00028PS50157PS50157PS50157PS50157PS50157G3DSA:3.30.160.60G3DSA:3.30.160.60G3DSA:3.30.160.60G3DSA:3.30.160.60G3DSA:3.30.160.60PTHR46179PTHR46179:SF13SSF57667SSF57667SSF57667
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 250..275
e-value: 2.3
score: 17.2
coord: 48..72
e-value: 0.0012
score: 28.1
coord: 116..140
e-value: 0.0012
score: 28.1
coord: 77..102
e-value: 0.0048
score: 26.1
coord: 189..210
e-value: 10.0
score: 13.1
coord: 161..186
e-value: 6.9
score: 14.7
coord: 20..42
e-value: 0.01
score: 25.0
coord: 219..244
e-value: 1.6E-4
score: 31.0
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 220..244
e-value: 2.2E-4
score: 21.5
coord: 22..42
e-value: 4.7E-4
score: 20.5
coord: 48..72
e-value: 0.0049
score: 17.3
coord: 116..140
e-value: 0.0013
score: 19.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 50..72
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 79..102
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 22..42
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 221..244
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 163..186
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 118..140
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 20..47
score: 12.715416
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 219..249
score: 13.338909
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 48..77
score: 9.286205
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 77..107
score: 10.782589
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 116..140
score: 10.678673
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 109..188
e-value: 2.4E-7
score: 32.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 49..74
e-value: 3.3E-9
score: 38.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 18..48
e-value: 5.2E-8
score: 34.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 214..295
e-value: 1.2E-10
score: 43.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 75..108
e-value: 8.0E-6
score: 27.4
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 6..320
NoneNo IPR availablePANTHERPTHR46179:SF13ZINC FINGER PROTEIN 423 HOMOLOGcoord: 6..320
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 113..140
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 20..72
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 201..257