MS004206.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS004206.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Vacuolar acid trehalase
Location	scaffold92: 823521 .. 826637 (+)
Sequence length	633
RNA-Seq Expression	MS004206.1
Synteny	MS004206.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCCCATGGCTTCGCCTCTTTCCTTCTCTCCGTGTCGCCTTCTCAACTCTCGCGCGCTTGCAATTGCAAGCACTCACTTCCACGCCATTAATGGCGCGCCTTCCCATATTTCAGCGCCATCCGTTTCTTCTGTTACCAATCCCCTCAAGTTTAAGCTCAAACAACATCTCAGAGCGTCTTCTGAAGGTATGTTTCTCTCCCTTCTCACACTCTTCCACTTCGTAATCATGGGAATTTTAATTTAGATATACGTTTCGAGTTGTTTGAGACGCTGCCCATTAGAAAGCGTTTTACGATTTTGAATCGGGATTTCTGAGAAATCTTCAGCTATTTCATTCGCGTTTTTCCTGATTACAAAAGGCTTAGAATCTCTACAAATCTGGAAATAATTTGCAAGGGCGGTGGCTTGTATATAGCACAGTATCACTGTTTTTTTTCATACGGCATAACTTGTTTCACTCCTACAGGAGCCCCTAATGAGTTAGTCGAAGATTCTAAGTTTGTTCCCTTGAATGCTGATGATCCCAGATATGGTCCACCTGTAAGTTCTGGTTAGTTTCAGCGCAATTGTTGACGTGGTTTATCTCTCGTTGCTTCTTTTCGGTGGATTTTCATTTTGATTGTTGTATATGTTTTCACTTTACTTATTGTCTGAGAATTGGGTTTTAATTTAAATTGAGCTCCTGTATTTTATGTTTATTGTACTATTAAGTTGAAGGCTCTTGGATGTGTACGTACCATATGTATTAGTTGTCGTCATCACCTTCATAATTTTCATTTTGGATTCTGTTTGTCTCATAGGATAAGTGTTATTTTATGATTTCCCTTGGGTTTTTCATCCTGTAATGTATGAAATTATGTCTTTCAATGCTTCCTTTCCGTTTCTTTATGTAATTAGAATAGGGGAAAGCAGGTTGATATTTAGACTGTTCATTATTGCAGGCATTGCTGTTACTGGGCTTTGAATTGGAGGAAGCCATGAAGGTACGGTGTTGATTTTTTTCCTTCTTTCCGCGCTTCAACATCTGAAAACTAAAATAAAGTAAAAATCATACTGCTAAGTGAAAGTAGAAACCAAACTCCTGGTGGAGTATAGTTCTTTTACTGTTTCAGTGGATAATCTGCCGGTTATAGTTAAGGAGGTGATTCTGCAAACTGTTTGGTTTTGCTTTCTAGTTCTTCAAGTATTTTCCGAAGGAAGAGAGCAAAGGAATGCACTTCCTTTCTGATATTTATTAGTGGACCACGCTTCGAATGTCTACTGTGCTACAATTTACAAATGCTTGCAAATGCTATTGTCAAAAATTTATTGAGGAATGCTTTCATTATTAGCTAACTACGCTTGCAGTATGGTATTTCAGTCCTCTAATGCACTTATTTCTCACGAATTTTTTTGGTACTTGGAGATTTTTTCTAGATTTTGTGTTGTTTATCCTACAGATCGTGACAACACCTTCTGGTTAGTTCTTTTAGAGGTCGAATTTAATTGTATGGAGGGTTGAGGTTTATTATTTATAGTCACTGCTTTTTTCTTTGCCTGAACCTTCATAATATATTCTTATAAAGAAACACTAAGCAACTTCATTCAAAGTTCTGCTATTCAGTCACTACGACACTATATAACCAAAACAGCCAAGCGGGCACCTAAAAACTCCTTGTCTCCTCGCTTATCCTTTAGCTTTGAAATGCCAGTTTCGAAAACTACTACCCTGTTTGATTTTTTGCTTTACATTTGATTACAGATTCAAGAGCTTTTGAAAGATTTGGGCGGTGAATTCATGCAGGTAGTTCATTTCCCCTCGTGTCCAATTACTTTTAGGTAAGATGAAAGGCGGTTGTTATTAAGAATAGTAGAATAAAATATGAAAATGTTGTTCAATGCATTGAAGCACTAATTGTGGAAAATTAACCCTCTAATCATCAATCCAAATCTCTTGTGAAAAGTTAAAACTCGCTTGATATTATGCTAAATGTAACCAAGTGCATTACTGATAAGTGATTATTCAAAGAGATTTTTACTAGTGCAAACTCATGGTTTAATCTGTTTTTCACAATCTTTCGGTTCAAATTACTATTTATGTATATTTAACATTTTCCCCCATATCATGCATTATCTTCTGATCCTATAGTTTGGGAAACTTTTCTTTGGCAACCTCCTTTCTGAACTTCAAACCAAAAAATTTGGTCGATCTCATCTAGTTCCCTGATATTTTTTTGTCTAATCGAATACATGTAAGTAAAAAAATTCCCATCACGGTAGCAAGTCTCTGTGAAGTAGTTCTGGCATGCTACGTGTGTTGTCTTACACATTGCATAAATTTATTAATCATCTCTAACAACAGATTGCACAAAACTACCAACATCAATAATCTGTCGAACAGTTTTTTTAGTGTAGGTTATTCTTTGTACTGAAGACATGATTGCCAGATCCCTGTGGGAAGCAGTGCATACAAGCCAGCCAGTTTTGGCAAACGTGAAGGTCAAGTTCTGAACTTCCTGAATTTTTACATTTTTAGTTTAGTATGTGCTTGCTATATTGTTCTCATAAAGAATCTAACTTTTGAAGCATGAAAACAGATCAAATCAATGAGTTAGCAGATCTTGATTATTCTCACATAACATTCTTTGTTAATGTGATACTGTAATGTCACTAACACCATGTATATTGTTTCTGCAGATAGCAAGATCATTGCCACGAATCTGCTTCTTATCCGGTCTTAGCGGAGAGGAAATGATGATGTTCATCGACACTTTTCCAGAAACTGGTATTGAAAAGATTACCCTCTTCTTTTTCATTTTAAGGAGAAGTTGGGACTTGGGATCTTTTAAAATCCAAAAGTACATTTGATCATTTGCATATTCCTTTACTCTCTTTCTCCATATTGTCATTCTCAAAACAGCACGGGTCTGTTATAGTATGATCACCACTAGCACCATGACCAGAGAAGCAGAGCAAAACTCTCTCTCTCTCTCTCTCTCAGTCTTGATTTTCTTATGGTGCAGGACTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGGTGCCAATAAACCAGTAGAGGAGTTAATAGCAGAGATTACGGGGGACCATGAAATGATGGTAAGGGAGAATTCC

mRNA sequence

GCTCCCATGGCTTCGCCTCTTTCCTTCTCTCCGTGTCGCCTTCTCAACTCTCGCGCGCTTGCAATTGCAAGCACTCACTTCCACGCCATTAATGGCGCGCCTTCCCATATTTCAGCGCCATCCGTTTCTTCTGTTACCAATCCCCTCAAGTTTAAGCTCAAACAACATCTCAGAGCGTCTTCTGAAGGAGCCCCTAATGAGTTAGTCGAAGATTCTAAGTTTGTTCCCTTGAATGCTGATGATCCCAGATATGGTCCACCTGCATTGCTGTTACTGGGCTTTGAATTGGAGGAAGCCATGAAGATTCAAGAGCTTTTGAAAGATTTGGGCGGTGAATTCATGCAGGTAGTTATTCTTTGTACTGAAGACATGATTGCCAGATCCCTGTGGGAAGCAGTGCATACAAGCCAGCCAGTTTTGGCAAACGTGAAGATAGCAAGATCATTGCCACGAATCTGCTTCTTATCCGGTCTTAGCGGAGAGGAAATGATGATGTTCATCGACACTTTTCCAGAAACTGGACTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGGTGCCAATAAACCAGTAGAGGAGTTAATAGCAGAGATTACGGGGGACCATGAAATGATGGTAAGGGAGAATTCC

Coding sequence (CDS)

GCTCCCATGGCTTCGCCTCTTTCCTTCTCTCCGTGTCGCCTTCTCAACTCTCGCGCGCTTGCAATTGCAAGCACTCACTTCCACGCCATTAATGGCGCGCCTTCCCATATTTCAGCGCCATCCGTTTCTTCTGTTACCAATCCCCTCAAGTTTAAGCTCAAACAACATCTCAGAGCGTCTTCTGAAGGAGCCCCTAATGAGTTAGTCGAAGATTCTAAGTTTGTTCCCTTGAATGCTGATGATCCCAGATATGGTCCACCTGCATTGCTGTTACTGGGCTTTGAATTGGAGGAAGCCATGAAGATTCAAGAGCTTTTGAAAGATTTGGGCGGTGAATTCATGCAGGTAGTTATTCTTTGTACTGAAGACATGATTGCCAGATCCCTGTGGGAAGCAGTGCATACAAGCCAGCCAGTTTTGGCAAACGTGAAGATAGCAAGATCATTGCCACGAATCTGCTTCTTATCCGGTCTTAGCGGAGAGGAAATGATGATGTTCATCGACACTTTTCCAGAAACTGGACTTGAACCAGCTGTATTTGCTGCTCTTGTTCCCAACGGTGCCAATAAACCAGTAGAGGAGTTAATAGCAGAGATTACGGGGGACCATGAAATGATGGTAAGGGAGAATTCC

Protein sequence

APMASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSEGAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTEDMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAALVPNGANKPVEELIAEITGDHEMMVRENS

Homology

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BLAST of MS004206.1 vs. NCBI nr
Match: XP_022138904.1 (uncharacterized protein LOC111009971 [Momordica charantia])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 195/209 (93.30%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MASPLSFSP RLLNSRALAIASTHFHAIN APS ISAPSVSSV+NPLKFKLKQ LRASSE
Sbjct: 1   MASPLSFSPRRLLNSRALAIASTHFHAINVAPSQISAPSVSSVSNPLKFKLKQPLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQ VILCTE
Sbjct: 61  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMIARSLW+AVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAV+AA
Sbjct: 121 DMIARSLWDAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVYAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPNGANKPV ELIAEI GDHEMM    S
Sbjct: 181 LVPNGANKPVGELIAEIMGDHEMMTGATS 208

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BLAST of MS004206.1 vs. NCBI nr
Match: XP_038891527.1 (uncharacterized protein LOC120080918 isoform X2 [Benincasa hispida])

HSP 1 Score: 319.3 bits (817), Expect = 2.5e-83
Identity = 169/204 (82.84%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           +AS L+FSP  LLNSRAL    T FH INGAPS IS  SVSS +NPLK KL++  R SSE
Sbjct: 3   LASSLTFSPYPLLNSRAL--PPTFFHFINGAPSKISPLSVSSTSNPLKLKLRRTFRVSSE 62

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEA+KIQELLKDL GEFMQ VILCTE
Sbjct: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAVKIQELLKDLDGEFMQ-VILCTE 122

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI +SLWEAVHT+QPVLA VKIARSLPRICFLSGLSGEEMMMFID FPETGLEPAVFAA
Sbjct: 123 DMITQSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAA 182

Query: 183 LVPNGANKPVEELIAEITGDHEMM 207
           LVPN ANKPVEELI EI GDHE +
Sbjct: 183 LVPNAANKPVEELIEEIMGDHEAL 203

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BLAST of MS004206.1 vs. NCBI nr
Match: XP_038891526.1 (uncharacterized protein LOC120080918 isoform X1 [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 169/210 (80.48%), Postives = 178/210 (84.76%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           +AS L+FSP  LLNSRAL    T FH INGAPS IS  SVSS +NPLK KL++  R SSE
Sbjct: 3   LASSLTFSPYPLLNSRAL--PPTFFHFINGAPSKISPLSVSSTSNPLKLKLRRTFRVSSE 62

Query: 63  ------GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQV 122
                 GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEA+KIQELLKDL GEFMQ 
Sbjct: 63  VNFTSTGAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAVKIQELLKDLDGEFMQ- 122

Query: 123 VILCTEDMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLE 182
           VILCTEDMI +SLWEAVHT+QPVLA VKIARSLPRICFLSGLSGEEMMMFID FPETGLE
Sbjct: 123 VILCTEDMITQSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLE 182

Query: 183 PAVFAALVPNGANKPVEELIAEITGDHEMM 207
           PAVFAALVPN ANKPVEELI EI GDHE +
Sbjct: 183 PAVFAALVPNAANKPVEELIEEIMGDHEAL 209

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BLAST of MS004206.1 vs. NCBI nr
Match: XP_022956817.1 (uncharacterized protein LOC111458403 [Cucurbita moschata] >KAG7031981.1 hypothetical protein SDJN02_06023 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 165/209 (78.95%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSRAL   ST FH I GAPS I + SVSS++NPLK KL++ LRASSE
Sbjct: 1   MASSLTFSPYPFLNSRAL--PSTFFHFIIGAPSRIPSLSVSSISNPLKLKLRRTLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNEL+EDSKFVPLNADDP YGPPALLLLGFELE+A+KIQELLK L GEFMQ VILCTE
Sbjct: 61  GAPNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI RSLWEAVHT+QP LA VKIA+SLPRICFLSGLSGEE MMFID FPETGLEPAVFAA
Sbjct: 121 DMITRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPN ANKPVEELI EI GDHE +    S
Sbjct: 181 LVPNAANKPVEELIEEIMGDHEALTGATS 206

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BLAST of MS004206.1 vs. NCBI nr
Match: XP_023535741.1 (uncharacterized protein LOC111797077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.1 bits (788), Expect = 5.7e-80
Identity = 165/209 (78.95%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSRAL   ST FH I GAPS I   SVSS +NPLK KL++ LRASSE
Sbjct: 1   MASSLTFSPYPFLNSRAL--PSTFFHFIIGAPSRIPPLSVSSTSNPLKLKLRRTLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNEL+EDSKFVPLNADDP YGPPALLLLGFELE+A+KIQELLK L GEFMQ VILCTE
Sbjct: 61  GAPNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI RSLWEAVHT+QP LA VKIA+SLPRICFLSGLSGEE MMFID FPETGLEPAVFAA
Sbjct: 121 DMITRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPN ANKPVEELI EI GDHE +    S
Sbjct: 181 LVPNAANKPVEELIEEIMGDHEALTGATS 206

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BLAST of MS004206.1 vs. ExPASy TrEMBL
Match: A0A6J1CBE2 (uncharacterized protein LOC111009971 OS=Momordica charantia OX=3673 GN=LOC111009971 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.1e-100
Identity = 195/209 (93.30%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MASPLSFSP RLLNSRALAIASTHFHAIN APS ISAPSVSSV+NPLKFKLKQ LRASSE
Sbjct: 1   MASPLSFSPRRLLNSRALAIASTHFHAINVAPSQISAPSVSSVSNPLKFKLKQPLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQ VILCTE
Sbjct: 61  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMIARSLW+AVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAV+AA
Sbjct: 121 DMIARSLWDAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVYAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPNGANKPV ELIAEI GDHEMM    S
Sbjct: 181 LVPNGANKPVGELIAEIMGDHEMMTGATS 208

[Close]

BLAST of MS004206.1 vs. ExPASy TrEMBL
Match: A0A6J1GXF1 (uncharacterized protein LOC111458403 OS=Cucurbita moschata OX=3662 GN=LOC111458403 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.2e-81
Identity = 165/209 (78.95%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSRAL   ST FH I GAPS I + SVSS++NPLK KL++ LRASSE
Sbjct: 1   MASSLTFSPYPFLNSRAL--PSTFFHFIIGAPSRIPSLSVSSISNPLKLKLRRTLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNEL+EDSKFVPLNADDP YGPPALLLLGFELE+A+KIQELLK L GEFMQ VILCTE
Sbjct: 61  GAPNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI RSLWEAVHT+QP LA VKIA+SLPRICFLSGLSGEE MMFID FPETGLEPAVFAA
Sbjct: 121 DMITRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPN ANKPVEELI EI GDHE +    S
Sbjct: 181 LVPNAANKPVEELIEEIMGDHEALTGATS 206

[Close]

BLAST of MS004206.1 vs. ExPASy TrEMBL
Match: A0A6J1JNY6 (uncharacterized protein LOC111487032 OS=Cucurbita maxima OX=3661 GN=LOC111487032 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.6e-80
Identity = 163/209 (77.99%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSRAL   ST FH I G+PS IS  SVSS++NPLK KL++ LRASSE
Sbjct: 1   MASSLTFSPYAFLNSRAL--PSTFFHFIIGSPSRISPLSVSSISNPLKLKLRRTLRASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GAPNEL+EDSKFVPLNADDP YGPPALLLLGFELE+A+KIQELLK L GEFMQ VILCTE
Sbjct: 61  GAPNELIEDSKFVPLNADDPTYGPPALLLLGFELEDAVKIQELLKKLDGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DM  RSLWEAVHT+QP LA VKIA+SLPRICFLSGLSGEE MMFID FPETGLEPAVFAA
Sbjct: 121 DMFNRSLWEAVHTNQPDLAKVKIAKSLPRICFLSGLSGEETMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPN ANKPVEEL+ EI GDHE +    S
Sbjct: 181 LVPNAANKPVEELVEEIMGDHEALTGATS 206

[Close]

BLAST of MS004206.1 vs. ExPASy TrEMBL
Match: A0A0A0KRH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622600 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.3e-79
Identity = 162/209 (77.51%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSR L   ++ FH INGA S IS  S SS  NPLK K+++  +ASSE
Sbjct: 1   MASSLTFSPYPFLNSRTL--RTSLFHFINGASSKISPLSASSTCNPLKLKVRRTFKASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GA NEL+ED+KFVPLNADDPRYGPPALLLLGFEL+EA+KIQELLKDL GEFMQ VILCTE
Sbjct: 61  GASNELMEDAKFVPLNADDPRYGPPALLLLGFELDEAVKIQELLKDLDGEFMQ-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI RSLWEAVHT+QPVLA VKIARSLPRICFLSGLSG+EMMMFID FPETGLEPAVFAA
Sbjct: 121 DMITRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGDEMMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMMVRENS 212
           LVPN ANKPVEELI EI GDHE M    S
Sbjct: 181 LVPNAANKPVEELIEEIMGDHEAMTGATS 206

[Close]

BLAST of MS004206.1 vs. ExPASy TrEMBL
Match: A0A5A7SZ69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002460 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.2e-77
Identity = 159/204 (77.94%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 3   MASPLSFSPCRLLNSRALAIASTHFHAINGAPSHISAPSVSSVTNPLKFKLKQHLRASSE 62
           MAS L+FSP   LNSR L   +T FH INGA S I   S SS  NP K KL++  +ASSE
Sbjct: 1   MASSLTFSPYPFLNSRTL--RTTLFHFINGASSKIPPLSASSTCNPFKLKLRRASKASSE 60

Query: 63  GAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAMKIQELLKDLGGEFMQVVILCTE 122
           GA NEL+ED+KFV LNADDPRYGPPALLLLGFEL+E +KIQELLKDL GEFM+ VILCTE
Sbjct: 61  GASNELIEDTKFVHLNADDPRYGPPALLLLGFELDEVVKIQELLKDLDGEFMR-VILCTE 120

Query: 123 DMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSGEEMMMFIDTFPETGLEPAVFAA 182
           DMI RSLWEAVHT+QPVLA VKIARSLPRICFLSGLSGEEMMMFID FPETGLEPAVFAA
Sbjct: 121 DMITRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGEEMMMFIDAFPETGLEPAVFAA 180

Query: 183 LVPNGANKPVEELIAEITGDHEMM 207
           LVPN ANKPVEELI EI GDHE M
Sbjct: 181 LVPNAANKPVEELIEEIMGDHEAM 201

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BLAST of MS004206.1 vs. TAIR 10
Match: AT3G10405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-56
Identity = 112/171 (65.50%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 41  SVSSVTNPLKFKLKQHLRASSEGAPNELVEDSKFVPLNADDPRYGPPALLLLGFELEEAM 100
           S S  TN    K K  +R S++  P  L EDSKFVPL+  DPR+GPP LLLLG +L EA 
Sbjct: 42  SKSHHTNTKLKKQKLCVRNSAQEIPKTLEEDSKFVPLDPQDPRFGPPVLLLLGLQLHEAQ 101

Query: 101 KIQELLKDLGGEFMQVVILCTEDMIARSLWEAVHTSQPVLANVKIARSLPRICFLSGLSG 160
           KIQELLK+L GEFM++V  CT+DMI RSLWEAV T QP L  VKIA SLPRICFLSGL+G
Sbjct: 102 KIQELLKELDGEFMEIV-FCTDDMIKRSLWEAVTTKQPDLKRVKIAESLPRICFLSGLTG 161

Query: 161 EEMMMFIDTFPETGLEPAVFAALVPNGANKPVEELIAEITGDHEMMVRENS 212
           EEMMMFID FPETGLEP VFAA+VPN A+KP+ EL  EI GDHE++   +S
Sbjct: 162 EEMMMFIDAFPETGLEPVVFAAMVPNSADKPIFELTEEIMGDHELLTGSSS 211

The following BLAST results are available for this feature:

BLAST of MS004206.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138904.1	1.9e-99	93.30	uncharacterized protein LOC111009971 [Momordica charantia]	[more]
XP_038891527.1	2.5e-83	82.84	uncharacterized protein LOC120080918 isoform X2 [Benincasa hispida]	[more]
XP_038891526.1	2.3e-81	80.48	uncharacterized protein LOC120080918 isoform X1 [Benincasa hispida]	[more]
XP_022956817.1	1.5e-80	78.95	uncharacterized protein LOC111458403 [Cucurbita moschata] >KAG7031981.1 hypothet...	[more]
XP_023535741.1	5.7e-80	78.95	uncharacterized protein LOC111797077 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS004206.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS004206.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBE2	9.1e-100	93.30	uncharacterized protein LOC111009971 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1GXF1	7.2e-81	78.95	uncharacterized protein LOC111458403 OS=Cucurbita moschata OX=3662 GN=LOC1114584...	[more]
A0A6J1JNY6	3.6e-80	77.99	uncharacterized protein LOC111487032 OS=Cucurbita maxima OX=3661 GN=LOC111487032...	[more]
A0A0A0KRH8	2.3e-79	77.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622600 PE=4 SV=1	[more]
A0A5A7SZ69	2.2e-77	77.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS004206.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10405.1	2.1e-56	65.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen d...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016621	Uncharacterised conserved protein UCP014543	PFAM	PF12646	DUF3783	coord: 151..206 e-value: 2.2E-14 score: 53.2
None	No IPR available	PANTHER	PTHR35732	OS10G0545100 PROTEIN	coord: 3..211

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS004206	MS004206	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS004206.1-cds	MS004206.1-cds-scaffold92:823521..823707	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:823989..824062	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:824464..824505	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:825264..825308	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:825917..826000	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:826199..826286	CDS
MS004206.1-cds	MS004206.1-cds-scaffold92:826525..826637	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS004206.1	MS004206.1-protein	polypeptide