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MS001831.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSEEADDQIPCLPISIAIAIAIATASLVIILLIFSLCCLAFTPHAVHQQPPPFLLVPT Homology
BLAST of MS001831.1 vs. NCBI nr
Match: XP_022134742.1 (uncharacterized protein LOC111006938 [Momordica charantia]) HSP 1 Score: 188.0 bits (476), Expect = 6.9e-44 Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of MS001831.1 vs. NCBI nr
Match: KAG6589372.1 (hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.6 bits (192), Expect = 5.9e-11 Identity = 77/211 (36.49%), Postives = 103/211 (48.82%), Query Frame = 0
BLAST of MS001831.1 vs. NCBI nr
Match: TYJ98442.1 (hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08 Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0
BLAST of MS001831.1 vs. NCBI nr
Match: KAA0057761.1 (hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 3.0e-07 Identity = 75/209 (35.89%), Postives = 103/209 (49.28%), Query Frame = 0
BLAST of MS001831.1 vs. NCBI nr
Match: KGN63472.1 (hypothetical protein Csa_014116 [Cucumis sativus]) HSP 1 Score: 59.7 bits (143), Expect = 2.8e-05 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 0
BLAST of MS001831.1 vs. ExPASy TrEMBL
Match: A0A6J1C0G4 (uncharacterized protein LOC111006938 OS=Momordica charantia OX=3673 GN=LOC111006938 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.3e-44 Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of MS001831.1 vs. ExPASy TrEMBL
Match: A0A5D3BFC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00430 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08 Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0
BLAST of MS001831.1 vs. ExPASy TrEMBL
Match: A0A5A7UWC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00440 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 75/209 (35.89%), Postives = 103/209 (49.28%), Query Frame = 0
BLAST of MS001831.1 vs. ExPASy TrEMBL
Match: A0A0A0LRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001440 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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