Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT
mRNA sequence
GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT
Coding sequence (CDS)
GAGGATGAAGAAGAGCTCATCTCCTACCTCCAGCGCCGTGGAAGCGCCACATTGTCGGGCTCATCCACGTGGAAGATCCGAACCAACGAGTTGGCCCAACACGAGTTTCGAAGAGAACGTAGGGCCGCCGCCGCCGCCATCGCCGCCCGGAAGCTCTCCTACGAGGATCTTCTATCATCCGAAGACGGCAATCAACAACAATTTCCCGTTTGTCTCAACGCTCTGTCTTATTCCTCTGCCTCCTCCTCCTCTTCTTCTGCTGCTTCGTCTTCTCCGTTAGGTCAAGATTTTAAACAACAAAAGGTACTCACCCCGCCGCCGCCTCTAGTTGAGAACACATCAGAAGAAGCTGATGATCAGATTCCCTGCCTTCCCATTTCCATTGCCATTGCCATTGCCATTGCCACTGCTTCCCTTGTAATTATATTGCTTATATTTTCGCTCTGTTGTTTGGCCTTTACACCACACGCTGTTCATCAACAACCACCTCCATTTCTTTTAGTTCCAACT
Protein sequence
EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSSEDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSEEADDQIPCLPISIAIAIAIATASLVIILLIFSLCCLAFTPHAVHQQPPPFLLVPT
Homology
BLAST of MS001831 vs. NCBI nr
Match:
XP_022134742.1 (uncharacterized protein LOC111006938 [Momordica charantia])
HSP 1 Score: 188.0 bits (476), Expect = 6.9e-44
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS 60
EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS
Sbjct: 10 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS 69
Query: 61 EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE 116
EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQK + P +E +++
Sbjct: 70 EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKRMHGPGTELEQSAQ 124
BLAST of MS001831 vs. NCBI nr
Match:
KAG6589372.1 (hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 78.6 bits (192), Expect = 5.9e-11
Identity = 77/211 (36.49%), Postives = 103/211 (48.82%), Query Frame = 0
Query: 3 EEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAA--AAAIAARKLSYEDL--- 62
E++LIS L R G+AT S SSTWKIRTNELAQ E RERRAA R+LS++D+
Sbjct: 11 EDDLISSLHRHGTATFSASSTWKIRTNELAQDEILRERRAAMGVGKFMGRRLSFDDVDMG 70
Query: 63 -------------------------LSSEDGNQ-------------QQFPVCLNALSYSS 122
+ S D +Q ++ PVCLN LSYSS
Sbjct: 71 HALNTELLHGNYWNGFVQDQIVAPSVQSSDSSQDNRNRETGKEEEEEEVPVCLNGLSYSS 130
Query: 123 ASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSEEADDQIPCLPISIAIAIAIATASL 171
ASSSSSS++ S Q +++ V E ++ + +A +A AS
Sbjct: 131 ASSSSSSSSGSFAPPQVKEEENVRAS-----VGGKREIGNRCRIGTWEVGLA-CLAIAS- 190
BLAST of MS001831 vs. NCBI nr
Match:
TYJ98442.1 (hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08
Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
++E+ELIS L R G+ S WKIRTN+LA + RRERRAA A+ + R+LSY+D +
Sbjct: 7 QEEDELISSLNRHGTP----PSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAV 66
Query: 61 -------------------------------SSEDGNQ--QQFPVCLNALSYSSASSSSS 120
SS+ G + +Q PVCLNALSYS ASSSSS
Sbjct: 67 DMSLHLKNTDFLHGDYLDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCASSSSS 126
Query: 121 SAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASL 171
S++S + K++ KV +V E + + +A +A+A+ +
Sbjct: 127 SSSSGQLVPPQTKEEMAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPM 186
BLAST of MS001831 vs. NCBI nr
Match:
KAA0057761.1 (hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 66.2 bits (160), Expect = 3.0e-07
Identity = 75/209 (35.89%), Postives = 103/209 (49.28%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
++E+ELIS L R G+ S WKIRTN+LA + RRERRAA A+ + R+LSY+D +
Sbjct: 7 QEEDELISSLNRHGTP----PSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAV 66
Query: 61 ------------------------------SSEDGNQ--QQFPVCLNALSYSSASSSSSS 120
SS+ G + +Q PVCLNALSYS ASSSSSS
Sbjct: 67 DMSLHLKNTDFLHGDYLDEFPQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCASSSSSS 126
Query: 121 AASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVI 171
++ Q ++ KV +V E + + +A +A+A+ +V
Sbjct: 127 SSGQLVPPQTKEEMAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMV- 186
BLAST of MS001831 vs. NCBI nr
Match:
KGN63472.1 (hypothetical protein Csa_014116 [Cucumis sativus])
HSP 1 Score: 59.7 bits (143), Expect = 2.8e-05
Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
E++ ELIS L R + SS+WKIRTN+LA E R ERRAA A+ + AR+LSY+D +
Sbjct: 8 EEDAELISTLNRHATP----SSSWKIRTNQLAYEEIRTERRAAIASGNLKARRLSYDDAI 67
Query: 61 -----------------------------SSEDGNQQQFPVCLNALSYSSASSSSSSAAS 120
SS+ G ++ VCLNALSYS ASSSSSS
Sbjct: 68 DMSLHLNTNFLLHGDYLDESPQDDDQMIPSSDPGEEKAEQVCLNALSYSCASSSSSS-GK 127
Query: 121 SSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIIL 171
PL + ++ + + EN + + + C + + +A +A AS + +
Sbjct: 128 FVPL----QMKEQMAAKAEVEENVRAVVGEIKMETRNGCKIGNWKVGLACLAIAS--VPM 187
BLAST of MS001831 vs. ExPASy TrEMBL
Match:
A0A6J1C0G4 (uncharacterized protein LOC111006938 OS=Momordica charantia OX=3673 GN=LOC111006938 PE=4 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 3.3e-44
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS 60
EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS
Sbjct: 10 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAAIAARKLSYEDLLSS 69
Query: 61 EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKVLTPPPPLVENTSE 116
EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQK + P +E +++
Sbjct: 70 EDGNQQQFPVCLNALSYSSASSSSSSAASSSPLGQDFKQQKRMHGPGTELEQSAQ 124
BLAST of MS001831 vs. ExPASy TrEMBL
Match:
A0A5D3BFC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00430 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 3.0e-08
Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
++E+ELIS L R G+ S WKIRTN+LA + RRERRAA A+ + R+LSY+D +
Sbjct: 7 QEEDELISSLNRHGTP----PSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAV 66
Query: 61 -------------------------------SSEDGNQ--QQFPVCLNALSYSSASSSSS 120
SS+ G + +Q PVCLNALSYS ASSSSS
Sbjct: 67 DMSLHLKNTDFLHGDYLDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCASSSSS 126
Query: 121 SAASSSPLGQDFKQQ-----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASL 171
S++S + K++ KV +V E + + +A +A+A+ +
Sbjct: 127 SSSSGQLVPPQTKEEMAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPM 186
BLAST of MS001831 vs. ExPASy TrEMBL
Match:
A0A5A7UWC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00440 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07
Identity = 75/209 (35.89%), Postives = 103/209 (49.28%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
++E+ELIS L R G+ S WKIRTN+LA + RRERRAA A+ + R+LSY+D +
Sbjct: 7 QEEDELISSLNRHGTP----PSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAV 66
Query: 61 ------------------------------SSEDGNQ--QQFPVCLNALSYSSASSSSSS 120
SS+ G + +Q PVCLNALSYS ASSSSSS
Sbjct: 67 DMSLHLKNTDFLHGDYLDEFPQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCASSSSSS 126
Query: 121 AASSSPLGQDFKQQ----KVLTPPPPLVENTSEEADDQIPCLPISIAIA-IAIATASLVI 171
++ Q ++ KV +V E + + +A +A+A+ +V
Sbjct: 127 SSGQLVPPQTKEEMAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMV- 186
BLAST of MS001831 vs. ExPASy TrEMBL
Match:
A0A0A0LRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001440 PE=4 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 0
Query: 1 EDEEELISYLQRRGSATLSGSSTWKIRTNELAQHEFRRERRAAAAA--IAARKLSYEDLL 60
E++ ELIS L R + SS+WKIRTN+LA E R ERRAA A+ + AR+LSY+D +
Sbjct: 8 EEDAELISTLNRHATP----SSSWKIRTNQLAYEEIRTERRAAIASGNLKARRLSYDDAI 67
Query: 61 -----------------------------SSEDGNQQQFPVCLNALSYSSASSSSSSAAS 120
SS+ G ++ VCLNALSYS ASSSSSS
Sbjct: 68 DMSLHLNTNFLLHGDYLDESPQDDDQMIPSSDPGEEKAEQVCLNALSYSCASSSSSS-GK 127
Query: 121 SSPLGQDFKQQKVLTPPPPLVENTSE-----EADDQIPCLPISIAIAIA-IATASLVIIL 171
PL + ++ + + EN + + + C + + +A +A AS + +
Sbjct: 128 FVPL----QMKEQMAAKAEVEENVRAVVGEIKMETRNGCKIGNWKVGLACLAIAS--VPM 187
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134742.1 | 6.9e-44 | 89.57 | uncharacterized protein LOC111006938 [Momordica charantia] | [more] |
KAG6589372.1 | 5.9e-11 | 36.49 | hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TYJ98442.1 | 6.1e-08 | 36.02 | hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa] | [more] |
KAA0057761.1 | 3.0e-07 | 35.89 | hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa] | [more] |
KGN63472.1 | 2.8e-05 | 34.78 | hypothetical protein Csa_014116 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C0G4 | 3.3e-44 | 89.57 | uncharacterized protein LOC111006938 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A5D3BFC1 | 3.0e-08 | 36.02 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UWC4 | 1.5e-07 | 35.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0LRR5 | 1.4e-05 | 34.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001440 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |