MELO3C032944.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C032944.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	transcription factor RAX3-like
Location	chr08: 9722032 .. 9725814 (-)
Sequence length	2604
RNA-Seq Expression	MELO3C032944.1
Synteny	MELO3C032944.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACAAAACCCCAATTTCCCTCTTCCTTTCTCACAACTCACACGATCCTAAACTCACCCATCCAAAATGCCGCCAACGCTTTCCGTGCTCACCTATCCCGAACGCCGCCGAACGCCGAACGCTAACTTCCATTCAAAAGTCGAACGCCTAACACAAACGCGAACACCGCTCCCCTGCTCCTCTGCTCGCGGAACGTCGAATGCCAAACGCCGCTCCCCTGCTCGTCGAAAGCCTAGTCCATGGTGGTTCCAATGACGTTGGATCCATGGTGGCATGACGACGTGATTGATTTAGATGCATCTTATTTTCGCTTAGTTTTCTTACATCTATGATTTTGAGGAAAAAGGGGGAAGAATGGGAAGAGCTCCTTGCTGTGACAGAGCCAATGTTAAGAAAGGGCCATGGTCTCCTGAAGAAAATGCGAAACACAAGTCTTATATTGAAAAACATGGAACCGGTGGTAATTGGATTGCTTTGCCTCAAAAAATTGGTAAGAGTTCTTCCTTTTTTTTTTTTTTTTTGGGTTGTAGATTTTCTGTTGTATAAAGTTAATTGGGGTTTAATTAAAAGTATTTTTAATTTTAGGACTTAAGAGATGTGGGAAAAGCTATAGGTTGAGATCGTTGAATTATCTTCATCCAAATATTAAGCATGGAACTTTCTCTAAAGAACAAGACAGAATCATTTGTAGTCTTTATGTTAGTATTGAAAGCAGGTAATGCTTTTTTTTTTTCTTCTTCTTCCCTATTCCATTTAAATTTTTCCATTAAAAAAACCCCAAATCATTTTAGAGGCTTAATATTAGAGTTTTGGTTTCAAAAAGGGAATGAAATCTAGCTAAATATATCAACTAAATGATTGATCTATCTTTTTTGTGTTTTTTTAACCTATTTCCCTTTATGTTGTTGATTTTTGAAAATTAATTAAAACTATTTTTTCTTAGGAATTTAGGCTATACTACCGGTGGTTCAAAAGCAGCATCAGCTTCTTGTTACGTTGCTATTATGCAATGTCGTTGCAATGGAGGTAATTGAATTGATTGGATCCGGAGCTCCCCTATTTACAATGCATACATAACAGGGACATTTTCCATTTCTGTTGAAACGAGGATGGCATTTAGGTGGAGAAATTAGTACTATAAATTATGGGTTTTATCTATGAGATTTTTCAGTTGAACGACAAATATTTGTCATTCCTCAACGTATTCGTCGTGGTATCTGTATTGAATTTTGTATAGCTTCTCTGTTCTAACATTTTCTACCTGCAGGCACTTCCTATATACTTGGATAAACTTTTTAATCAGTATGTTGCTATAATTCTCTCTGTGACATTTATATTGGCATTTGGAGAGGTATGTTGCTTTTATATGGTTATAGTTTGTTCTGGTTTTTCCCTTAATACACAATGAGACATTGTTTAGGTGTGCACAATTAAAAGCTCTCGTCTCCATCCACAGTTTAGAGGTGCGTGAATAATTTTGCTGCAAAATGTTATAAATTCCAATAATCTTTTTTCCCTCTTAAATCTTACTACTTGTGTATAGGCCGAAAAGGGTGGTCAGTACGTCTATCGAGTGGTCATTCAATTCCTGTTCATGTGTAGGTTGTTGAAGGCCCATGTGATTCTGTAATTATTCCTGATGGGGCACCCTTATCTGCATACCAATACTTTGAGAATGTGAGAAACTTTTTGGTGGCCATAGAAGAAATGGGGTGAATTATATTATAAAAAGCCTACTTAATATAACAAGAACATCACTAGTGTAGCCATAATACTAATAATAATAGTTTTAACTTGTTTAAAAGGGGTGAAATGGTTATTTATTAATTAGACATTTCTTTATAGTTGCTCTGGAGATGTCCATTAATATCTATATTTTCTGTTGACATTTTCATTAAAGTACTGGGCGCTGTGTTTGTTTGGTTTTTATTGGTTTTTGGCACAAGTTTTACATTTGTTGAAATTATGTGTAGACTCATACAACGAACACGAGAAAGCCTGCATTTAGGTGGTTGGAAGTGAGGGGTAAAGTCAAAAATGAGTCAACCCTTCTTCCAGAGTCCAGAAAAAGGGCATTTGGAACTCAATTTGGACCCCTTTACTCCAATAACAGTAGCTAAAGTTGGTGTCTTGTACAATAACAATGTGAAGTGGACTCATGACTGGGAAAGTCTTTCCTCAACATTCCGTCCCCAGTATCACAACCAAGGTAAATCCTCTAATTAAGCACAGTTGAACAACGTTCTGTTTTATTTTGAAATGCCATAGTGGATTTAAGTGGCCAATTCGTTGAATGTCCAAACTCCAGTCACCTTTTCATATATCATCAGTTGTCCCATTAGTTTTCATTTTCAATTTTACTTTAGCACGCTTTTCATGCTTGATATTGTAACCTTTATTGGTCAATATTAGGTGACACGTTTCGAACTTTTAAGATGATCTTCAAACTTGATACAAACTAATATCGTGGTGTTTGTTTTTGGAATCGTCAGCCTTAAAAGAATTTTTCTCCCATTATGTGGAAGCTTGGAAATCATGGTATTCTAAAGCAGTGAAGAAAGCTATACAAATTTCTTGATGTGCTTTGTTGCTTGCTCGAAATATTTAATAAGTTTATCTCGATTAAGTGTTATTTCTGAAAGCTTGCCCTTTTCCTTGGTTGCATTTCCTTAGTGCACCAACGTATTATAAGGTCATCTTTAGAAGTGCCAAACACTTGCAATAGGTTCTTGTTTGTATTATCCAGAAAACAAGCCTAACATAATTGTTAGTAATTTTTTTTTCTCTCTTCCTTCTCCCCATGTTATTTTATTGTAGTTATTTCCTTTCCCCTACATTGTTCAATGAAATGGGCGACTTCGCCTTAGTTGAAAAGCAATTTCCTATTGAAATCAAAATGATATACATATTGAAATTTTCGTCTAGAAATCTTATTTTCTTGCCTGTCTGTTCGAGAACATCCTAGGTTTCTGGATGCAATTCTTTTGAAAGTAAATGATTGCAAAGAAAACTTCCAAATCAGAGAAGTTGGCTTATCGATTCTGGATGATCGTTTGGTACTAGTTCTTTATCTATAGCTTGCTGTCTGTTTCTTCCACTTGTTTCATGCCATATAATTCCTCAAGTCTAACAGGATTCTTTTCCTTTTCATCCTGCTGAACTATCATAGGACAGTAAATTTTGGAGAAATCGAGGGAAAATATGCAGCAGTGGTTTATTTTGATTAATTAGACTGTTACTTGGAAGATATATTGAACTTGAGTAAATTTTGTATAGATATACATGAGTTTCGTGCTTCTTCAGAATTTCGTGCTCTTGATTCACTTGCTGGAAACTCCTTATGCATCTATATAACAAAATGAGTAAATTTTGTATAGATATACAGAATTTGGTGTTCTCTCATTAGTTATCTTTTACTTTGTAAAGTTAATATATGAACTTAGAAATATATTATCATTATCCTTCAAGATTTCTTGCTGAGCAAGATTTCTTGCTGAGCAAGATTTCTTGCTGAGCAAGATTTCTTGAACATGCACTGTTTGCATTTTTTTTAATGGTTACTGTTTAATGGTTACTCTGCAAGGACAGTACGACAACGACGACATTTAGCAAGTCCATAAAATAGTAAGTCATTACTTGTAGATTACACATTTCAATTATCCATTATATAAGCATTTCTATAACTTATATTAATTTTGCTATCTTTTATTTTACATGTTTACAGATTGATACACGAAAACCATACTCACAAGTTGAGTTAGATGAGGTGCGGGTTGAGTTGG

mRNA sequence

CACACAAAACCCCAATTTCCCTCTTCCTTTCTCACAACTCACACGATCCTAAACTCACCCATCCAAAATGCCGCCAACGCTTTCCGTGCTCACCTATCCCGAACGCCGCCGAACGCCGAACGCTAACTTCCATTCAAAAGTCGAACGCCTAACACAAACGCGAACACCGCTCCCCTGCTCCTCTGCTCGCGGAACGTCGAATGCCAAACGCCGCTCCCCTGCTCGTCGAAAGCCTAGTCCATGGTGGTTCCAATGACGTTGGATCCATGGTGGCATGACGACGTGATTGATTTAGATGCATCTTATTTTCGCTTAGTTTTCTTACATCTATGATTTTGAGGAAAAAGGGGGAAGAATGGGAAGAGCTCCTTGCTGTGACAGAGCCAATGTTAAGAAAGGGCCATGGTCTCCTGAAGAAAATGCGAAACACAAGTCTTATATTGAAAAACATGGAACCGGTGGTAATTGGATTGCTTTGCCTCAAAAAATTGGACTTAAGAGATGTGGGAAAAGCTATAGGTTGAGATCGTTGAATTATCTTCATCCAAATATTAAGCATGGAACTTTCTCTAAAGAACAAGACAGAATCATTTGTAGTCTTTATGTTAGTATTGAAAGCAGGAATTTAGGCTATACTACCGGTGGTTCAAAAGCAGCATCAGCTTCTTGTTACGTTGCTATTATGCAATGTCGTTGCAATGGAGGTAATTGAATTGATTGGATCCGGAGCTCCCCTATTTACAATGCATACATAACAGGGACATTTTCCATTTCTGTTGAAACGAGGATGGCATTTAGGTGGAGAAATTAGTACTATAAATTATGGGTTTTATCTATGAGATTTTTCAGTTGAACGACAAATATTTGTCATTCCTCAACGTATTCGTCGTGGTATCTGTATTGAATTTTGTATAGCTTCTCTGTTCTAACATTTTCTACCTGCAGGCACTTCCTATATACTTGGATAAACTTTTTAATCAGTATGTTGCTATAATTCTCTCTGTGACATTTATATTGGCATTTGGAGAGGTATGTTGCTTTTATATGGTTATAGTTTGTTCTGGTTTTTCCCTTAATACACAATGAGACATTGTTTAGGTGTGCACAATTAAAAGCTCTCGTCTCCATCCACAGTTTAGAGGTGCGTGAATAATTTTGCTGCAAAATGTTATAAATTCCAATAATCTTTTTTCCCTCTTAAATCTTACTACTTGTGTATAGGCCGAAAAGGGTGGTCAGTACGTCTATCGAGTGGTCATTCAATTCCTGTTCATGTGTAGGTTGTTGAAGGCCCATGTGATTCTGTAATTATTCCTGATGGGGCACCCTTATCTGCATACCAATACTTTGAGAATGTGAGAAACTTTTTGGTGGCCATAGAAGAAATGGGGTGAATTATATTATAAAAAGCCTACTTAATATAACAAGAACATCACTAGTGTAGCCATAATACTAATAATAATAGTTTTAACTTGTTTAAAAGGGGTGAAATGGTTATTTATTAATTAGACATTTCTTTATAGTTGCTCTGGAGATGTCCATTAATATCTATATTTTCTGTTGACATTTTCATTAAAGTACTGGGCGCTGTGTTTGTTTGGTTTTTATTGGTTTTTGGCACAAGTTTTACATTTGTTGAAATTATGTGTAGACTCATACAACGAACACGAGAAAGCCTGCATTTAGGTGGTTGGAAGTGAGGGGTAAAGTCAAAAATGAGTCAACCCTTCTTCCAGAGTCCAGAAAAAGGGCATTTGGAACTCAATTTGGACCCCTTTACTCCAATAACAGTAGCTAAAGTTGGTGTCTTGTACAATAACAATGTGAAGTGGACTCATGACTGGGAAAGTCTTTCCTCAACATTCCGTCCCCAGTATCACAACCAAGGTTTCTGGATGCAATTCTTTTGAAAGTAAATGATTGCAAAGAAAACTTCCAAATCAGAGAAGTTGGCTTATCGATTCTGGATGATCGTTTGGTACTAGTTCTTTATCTATAGCTTGCTGTCTGTTTCTTCCACTTGTTTCATGCCATATAATTCCTCAAGTCTAACAGGATTCTTTTCCTTTTCATCCTGCTGAACTATCATAGGACAGTAAATTTTGGAGAAATCGAGGGAAAATATGCAGCAGTGGTTTATTTTGATTAATTAGACTGTTACTTGGAAGATATATTGAACTTGAGTAAATTTTGTATAGATATACATGAGTTTCGTGCTTCTTCAGAATTTCGTGCTCTTGATTCACTTGCTGGAAACTCCTTATGCATCTATATAACAAAATGAGTAAATTTTGTATAGATATACAGAATTTGGTGTTCTCTCATTAGTTATCTTTTACTTTGTAAAGTTAATATATGAACTTAGAAATATATTATCATTATCCTTCAAGATTTCTTGCTGAGCAAGATTTCTTGCTGAGCAAGATTTCTTGCTGAGCAAGATTTCTTGAACATGCACTGTTTGCATTTTTTTTAATGGTTACTGTTTAATGGTTACTCTGCAAGGACAGTACGACAACGACGACATTTAGCAAGTCCATAAAATAATTGATACACGAAAACCATACTCACAAGTTGAGTTAGATGAGGTGCGGGTTGAGTTGG

Coding sequence (CDS)

ATGGGAAGAGCTCCTTGCTGTGACAGAGCCAATGTTAAGAAAGGGCCATGGTCTCCTGAAGAAAATGCGAAACACAAGTCTTATATTGAAAAACATGGAACCGGTGGTAATTGGATTGCTTTGCCTCAAAAAATTGGACTTAAGAGATGTGGGAAAAGCTATAGGTTGAGATCGTTGAATTATCTTCATCCAAATATTAAGCATGGAACTTTCTCTAAAGAACAAGACAGAATCATTTGTAGTCTTTATGTTAGTATTGAAAGCAGGAATTTAGGCTATACTACCGGTGGTTCAAAAGCAGCATCAGCTTCTTGTTACGTTGCTATTATGCAATGTCGTTGCAATGGAGGTAATTGA

Protein sequence

MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLNYLHPNIKHGTFSKEQDRIICSLYVSIESRNLGYTTGGSKAASASCYVAIMQCRCNGGN

Homology

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BLAST of MELO3C032944.1 vs. NCBI nr
Match: XP_016902141.1 (PREDICTED: transcription factor RAX3-like isoform X2 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 93/109 (85.32%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
           MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN
Sbjct: 1   MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60

Query: 61  YLHPNIKHGTFSKEQDRIICSLYVSIESRNLGYTTGGSKAASASCYVAI 110
           YLHPNIKHGTFSKEQDRIICSLYVSIESR        S +    CY A+
Sbjct: 61  YLHPNIKHGTFSKEQDRIICSLYVSIESRLYYRWFKSSISFLLRCYYAM 109

[Close]

BLAST of MELO3C032944.1 vs. NCBI nr
Match: XP_022996951.1 (transcription factor RAX3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. NCBI nr
Match: XP_008444511.1 (PREDICTED: transcription factor RAX3-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. NCBI nr
Match: XP_004143035.1 (transcription factor RAX3 [Cucumis sativus] >KAE8652059.1 hypothetical protein Csa_018644 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. NCBI nr
Match: XP_038886327.1 (transcription factor RAX3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+ K K YI+K+GTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRII SLY+SI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-38
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIE  GTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E++ IICSLY++I SR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-35
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVK+GPWSPEE+AK K YIEK GTGGNWIALP K GL+RCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNI+HG F++E+D II SL+ SI SR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+  VKKGPWS EE+A  KSYIEKHGTG NWI+LPQ+IG+KRCGKS RLR LN
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PN+KHG F+ E+D IICSLY++I SR
Sbjct: 61 YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.2e-33
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+  VK+GPWSPEE++K + YIEK+G GGNWI+ P K GL+RCGKS RLR LN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRII SL+ +I SR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL
Match: A0A1S4E1N8 (transcription factor RAX3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497259 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.5e-47
Identity = 93/109 (85.32%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
           MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN
Sbjct: 1   MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60

Query: 61  YLHPNIKHGTFSKEQDRIICSLYVSIESRNLGYTTGGSKAASASCYVAI 110
           YLHPNIKHGTFSKEQDRIICSLYVSIESR        S +    CY A+
Sbjct: 61  YLHPNIKHGTFSKEQDRIICSLYVSIESRLYYRWFKSSISFLLRCYYAM 109

[Close]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL
Match: A0A6J1K654 (transcription factor RAX3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492028 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL
Match: A0A0A0LKH5 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G352940 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL
Match: A0A6J1HEB2 (transcription factor RAX3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462761 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL
Match: A0A1S3BAJ2 (transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487807 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIEKHGTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRIICSLYVSI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIICSLYVSIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 160.6 bits (405), Expect = 7.6e-40
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+ K K YI+K+GTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+DRII SLY+SI SR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-39
Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK KSYIE  GTGGNWIALPQKIGLKRCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E++ IICSLY++I SR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-39
Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVKKGPWSPEE+AK K YIE  GTGGNWIALPQKIGL+RCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNIKHG FS+E+D IIC+LYV+I SR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-36
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+ANVK+GPWSPEE+AK K YIEK GTGGNWIALP K GL+RCGKS RLR LN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PNI+HG F++E+D II SL+ SI SR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of MELO3C032944.1 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 148.3 bits (373), Expect = 3.9e-36
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDRANVKKGPWSPEENAKHKSYIEKHGTGGNWIALPQKIGLKRCGKSYRLRSLN 60
          MGRAPCCD+  VKKGPWS EE+A  KSYIEKHGTG NWI+LPQ+IG+KRCGKS RLR LN
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61 YLHPNIKHGTFSKEQDRIICSLYVSIESR 90
          YL PN+KHG F+ E+D IICSLY++I SR
Sbjct: 61 YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

The following BLAST results are available for this feature:

BLAST of MELO3C032944.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902141.1	1.8e-46	85.32	PREDICTED: transcription factor RAX3-like isoform X2 [Cucumis melo]	[more]
XP_022996951.1	4.6e-39	88.76	transcription factor RAX3-like isoform X2 [Cucurbita maxima]	[more]
XP_008444511.1	4.6e-39	88.76	PREDICTED: transcription factor RAX3-like [Cucumis melo]	[more]
XP_004143035.1	4.6e-39	88.76	transcription factor RAX3 [Cucumis sativus] >KAE8652059.1 hypothetical protein C...	[more]
XP_038886327.1	4.6e-39	88.76	transcription factor RAX3-like isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C032944.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKL2	1.1e-38	82.02	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9M2Y9	1.4e-38	82.02	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9SJL7	2.5e-35	75.28	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
F4JSU0	5.5e-35	74.16	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9FG68	5.2e-33	69.66	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of MELO3C032944.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1N8	8.5e-47	85.32	transcription factor RAX3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349725...	[more]
A0A6J1K654	2.2e-39	88.76	transcription factor RAX3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LKH5	2.2e-39	88.76	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G35294...	[more]
A0A6J1HEB2	2.2e-39	88.76	transcription factor RAX3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3BAJ2	2.2e-39	88.76	transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487807 PE=4 SV=1	[more]

BLAST of MELO3C032944.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57620.1	7.6e-40	82.02	myb domain protein 36	[more]
AT3G49690.1	1.0e-39	82.02	myb domain protein 84	[more]
AT5G65790.1	2.2e-39	80.90	myb domain protein 68	[more]
AT2G36890.1	1.8e-36	75.28	Duplicated homeodomain-like superfamily protein	[more]
AT4G37780.1	3.9e-36	74.16	myb domain protein 87	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 8.5E-12 score: 46.7
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR48000:SF26	MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED	coord: 1..89
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 5.9E-6 score: 26.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..66 score: 10.755817
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 7.735266
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..87

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032944	MELO3C032944	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032944.1:exon:231492	MELO3C032944.1:exon:231492	exon
MELO3C032944.1:exon:231491	MELO3C032944.1:exon:231491	exon
MELO3C032944.1:exon:231490	MELO3C032944.1:exon:231490	exon
MELO3C032944.1:exon:231489	MELO3C032944.1:exon:231489	exon
MELO3C032944.1:exon:231488	MELO3C032944.1:exon:231488	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032944.1:three_prime_utr	MELO3C032944.1:three_prime_utr	three_prime_UTR
MELO3C032944.1:three_prime_utr	MELO3C032944.1:three_prime_utr_2	three_prime_UTR
MELO3C032944.1:three_prime_utr	MELO3C032944.1:three_prime_utr_3	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032944.1:cds	MELO3C032944.1:cds	CDS
MELO3C032944.1:cds	MELO3C032944.1:cds_2	CDS
MELO3C032944.1:cds	MELO3C032944.1:cds_3	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032944.1:five_prime_utr	MELO3C032944.1:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032944.1	MELO3C032944.1-protein	polypeptide