Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACATACAAACACAAACAAAATAACCTTACTTCTCATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGAAAAAAAGATAAAAAGAACAGAGAATATATGTTTTATTGTTTGTTCCATTTTTGTTGTATATGCTTCTCCCTCCTTCATCTAATTTATTTTTATATATGTTCCTCATATATAAAAATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTGCT
mRNA sequence
ATACATACAAACACAAACAAAATAACCTTACTTCTCATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGAAAAAAAGATAAAAAGAACAGAGAATATATGTTTTATTGTTTGTTCCATTTTTGTTGTATATGCTTCTCCCTCCTTCATCTAATTTATTTTTATATATGTTCCTCATATATAAAAATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTGCT
Coding sequence (CDS)
ATGGCTTCTCTTTACCCGTATTTCTTCATTTATCTCCTCTTCCTTCTTATTCTATCTTCTCCTACTCAATCTATGTGTGCTCGTTGCGTCCCCCCAAGCGCCCCTAGCACCATCGTTAGACCGCTTGCTGCCACGCCCGACAATGCTGAAGACTACGAGACTGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGGAATGAAGTCAAGAGCTGCCTTCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTATCATACTTCTGGTGGTTGTTCTCCGACTACTGATCATTCTATTAACACCAACCCTTGA
Protein sequence
MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Homology
BLAST of MELO3C026916.1 vs. NCBI nr
Match:
KAE8646888.1 (hypothetical protein Csa_020968, partial [Cucumis sativus])
HSP 1 Score: 201.4 bits (511), Expect = 3.9e-48
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0
Query: 1 MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
MASL+PYFFIYLLFLL+LSSPTQSMCARCVPPSAPSTIVRPL ATPDNAE YETVKPQLI
Sbjct: 3 MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPL-ATPDNAEAYETVKPQLI 62
Query: 61 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106
NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS
Sbjct: 63 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106
BLAST of MELO3C026916.1 vs. NCBI nr
Match:
KAA0035234.1 (hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK22389.1 hypothetical protein E5676_scaffold173G00130 [Cucumis melo var. makuwa])
HSP 1 Score: 181.0 bits (458), Expect = 5.5e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 25 MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 84
MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1 MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60
Query: 85 APSRFVNYHTSGGCSPTTDHSINTNP 111
APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61 APSRFVNYHTSGGCSPTTDHSINTNP 86
BLAST of MELO3C026916.1 vs. NCBI nr
Match:
KAG6570806.1 (hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0
Query: 1 MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
MASL+P+ F YLLFLL+LSSP+ SM ARCVPPSAPSTIV PL ATP+ AEDYETVKPQL
Sbjct: 1 MASLFPFLF-YLLFLLLLSSPSPSMAARCVPPSAPSTIVTPL-ATPE-AEDYETVKPQL- 60
Query: 61 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT 109
NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Sbjct: 61 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT 104
BLAST of MELO3C026916.1 vs. NCBI nr
Match:
KAF3961747.1 (hypothetical protein CMV_013666 [Castanea mollissima])
HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0
Query: 7 YFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLV 66
Y+ + L LL+LSS +M AR +P SAPSTIVRPL + A+DY T+KP L K V
Sbjct: 6 YYTLVLCLLLLLSSIDTNMAARKIPSSAPSTIVRPLVS---EAQDYVTMKP-LFKHKHRV 65
Query: 67 FGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG 98
F G EVKSCLPKGFR SSAPSRFVNYH GG
Sbjct: 66 FRGKEVKSCLPKGFRHSSAPSRFVNYHALGG 92
BLAST of MELO3C026916.1 vs. NCBI nr
Match:
PON66506.1 (hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii])
HSP 1 Score: 95.9 bits (237), Expect = 2.3e-16
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 3 SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
SLY +Y + LL+LSS SM R +P SAPST+VRPL D +DY +++P L
Sbjct: 27 SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 86
Query: 63 KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
+ VF G E K CLPKGFR +SAPSRFVNYH G SP
Sbjct: 87 QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122
BLAST of MELO3C026916.1 vs. ExPASy TrEMBL
Match:
A0A0A0KDD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 106/110 (96.36%), Postives = 108/110 (98.18%), Query Frame = 0
Query: 1 MASLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLI 60
MASL+PYFFIYLLFLL+LSSPTQSMCARCVPPSAPSTIVRPL ATPDNAE YETVKPQLI
Sbjct: 1 MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPL-ATPDNAEAYETVKPQLI 60
Query: 61 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 111
NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61 NRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109
BLAST of MELO3C026916.1 vs. ExPASy TrEMBL
Match:
A0A5D3DGK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00130 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 25 MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 84
MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1 MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60
Query: 85 APSRFVNYHTSGGCSPTTDHSINTNP 111
APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61 APSRFVNYHTSGGCSPTTDHSINTNP 86
BLAST of MELO3C026916.1 vs. ExPASy TrEMBL
Match:
A0A2P5CZN8 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109280 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 3 SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
SLY +Y + LL+LSS SM R +P SAPST+VRPL D +DY +++P L
Sbjct: 27 SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 86
Query: 63 KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
+ VF G E K CLPKGFR +SAPSRFVNYH G SP
Sbjct: 87 QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122
BLAST of MELO3C026916.1 vs. ExPASy TrEMBL
Match:
A0A2P5FTP0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_029170 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 5.6e-16
Identity = 51/98 (52.04%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 3 SLYPYFFIYLLFLLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINR 62
SLY +Y + L+LSS SM R +P SAPST+VRPL D +DY +++P L
Sbjct: 6 SLYVMILLYSIISLLLSSFDVSMAGRAIPSSAPSTVVRPLVTDAD--QDYVSLRPHLNPG 65
Query: 63 KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 101
+ VF G E K CLPKGFR +SAPSRFVNYH G SP
Sbjct: 66 QNQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 101
BLAST of MELO3C026916.1 vs. ExPASy TrEMBL
Match:
A0A314YWA3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_04778 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 15 LLILSSPTQSMCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKS 74
LL + S+ AR +P SAPST+VRPL + + Y ++KPQ +N K+ VF G EVK
Sbjct: 14 LLFFTCFDVSLAARNIPSSAPSTMVRPLVT--EGLDHYVSMKPQDLNHKQQVFHGTEVKD 73
Query: 75 CLPKGFRRSSAPSRFVNYHTSG-GCS 100
CLPKGFR +SAPSR+VNYHT G GCS
Sbjct: 74 CLPKGFRHASAPSRYVNYHTLGQGCS 97
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646888.1 | 3.9e-48 | 96.19 | hypothetical protein Csa_020968, partial [Cucumis sativus] | [more] |
| KAA0035234.1 | 5.5e-42 | 100.00 | hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK2238... | [more] |
| KAG6570806.1 | 1.5e-39 | 87.04 | hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAF3961747.1 | 2.1e-17 | 61.54 | hypothetical protein CMV_013666 [Castanea mollissima] | [more] |
| PON66506.1 | 2.3e-16 | 53.06 | hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KDD3 | 1.4e-51 | 96.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1 | [more] |
| A0A5D3DGK4 | 2.6e-42 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A2P5CZN8 | 1.1e-16 | 53.06 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
| A0A2P5FTP0 | 5.6e-16 | 52.04 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_029170 PE=4 SV... | [more] |
| A0A314YWA3 | 4.7e-15 | 55.81 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_047... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026916.1:exon:334731 | MELO3C026916.1:exon:334731 | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026916.1:five_prime_utr | MELO3C026916.1:five_prime_utr | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026916.1:cds | MELO3C026916.1:cds | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026916.1:three_prime_utr | MELO3C026916.1:three_prime_utr | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026916.1 | MELO3C026916.1-protein | polypeptide |
