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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA mRNA sequence ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA Coding sequence (CDS) ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA Protein sequence MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Homology
BLAST of MELO3C026611.1 vs. NCBI nr
Match: KAA0057194.1 (hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK18767.1 hypothetical protein E5676_scaffold257G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 214.5 bits (545), Expect = 4.4e-52 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD
Sbjct: 1 MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
Query: 61 MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61 MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 108
BLAST of MELO3C026611.1 vs. NCBI nr
Match: KGN59752.1 (hypothetical protein Csa_001232 [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40 Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0
Query: 1 MGLDDWELLDCHEDR-EEKSR-HENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRG 60
MGLDDWELLDCHED +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR G
Sbjct: 1 MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60
Query: 61 MDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
MDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61 MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 110
BLAST of MELO3C026611.1 vs. ExPASy TrEMBL
Match: A0A5D3D5E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00740 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.1e-52 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD
Sbjct: 1 MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
Query: 61 MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61 MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 108
BLAST of MELO3C026611.1 vs. ExPASy TrEMBL
Match: A0A0A0LG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41 Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0
Query: 1 MGLDDWELLDCHEDR-EEKSR-HENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRG 60
MGLDDWELLDCHED +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR G
Sbjct: 1 MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60
Query: 61 MDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
MDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61 MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 110
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0057194.1 | 4.4e-52 | 100.00 | hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK1876... | [more] |
| KGN59752.1 | 1.0e-40 | 84.55 | hypothetical protein Csa_001232 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D5E0 | 2.1e-52 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LG95 | 4.9e-41 | 84.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026611.1:exon:120460 | MELO3C026611.1:exon:120460 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026611.1:cds | MELO3C026611.1:cds | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MELO3C026611.1 | MELO3C026611.1-protein | polypeptide |
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