MELO3C026476.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C026476.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histone-lysine N-methyltransferase ASHR1 isoform X1
Location	chr10: 24542037 .. 24542276 (-)
Sequence length	240
RNA-Seq Expression	MELO3C026476.1
Synteny	MELO3C026476.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAAGGAAAAATCAACATTATCTGAAGGAATAGAGGAGTTATCGAGCAGAGAACAATTGATTGAGAGAATCGTCGAAGCAGGAGGAGCAACGATGGTAGAAATCAAGATCGACGGAAAGATGAATAAAACTGAAGGAGACGAGAACTCGAATGATCGAAGTAAGTCTAAGAAAGTTGTGATGCCTGTGTTCAGCGGCATTGATCTAGATTCATGGCTGTTTAGAGTCGATCGATAA

mRNA sequence

ATGACAAAGGAAAAATCAACATTATCTGAAGGAATAGAGGAGTTATCGAGCAGAGAACAATTGATTGAGAGAATCGTCGAAGCAGGAGGAGCAACGATGGTAGAAATCAAGATCGACGGAAAGATGAATAAAACTGAAGGAGACGAGAACTCGAATGATCGAAGTAAGTCTAAGAAAGTTGTGATGCCTGTGTTCAGCGGCATTGATCTAGATTCATGGCTGTTTAGAGTCGATCGATAA

Coding sequence (CDS)

ATGACAAAGGAAAAATCAACATTATCTGAAGGAATAGAGGAGTTATCGAGCAGAGAACAATTGATTGAGAGAATCGTCGAAGCAGGAGGAGCAACGATGGTAGAAATCAAGATCGACGGAAAGATGAATAAAACTGAAGGAGACGAGAACTCGAATGATCGAAGTAAGTCTAAGAAAGTTGTGATGCCTGTGTTCAGCGGCATTGATCTAGATTCATGGCTGTTTAGAGTCGATCGATAA

Protein sequence

MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKVVMPVFSGIDLDSWLFRVDR

Homology

[Close]

BLAST of MELO3C026476.1 vs. NCBI nr
Match: KAA0065441.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
          MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV
Sbjct: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60

Query: 61 VMPVFSGIDLDSWLFRVDR 80
          VMPVFSGIDLDSWLFRVDR
Sbjct: 61 VMPVFSGIDLDSWLFRVDR 79

[Close]

BLAST of MELO3C026476.1 vs. NCBI nr
Match: KAA0054239.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-18
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1   MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
           + KEKST+  G+EE SSR   IE I+E G  T+ EIKI+GKMNK+EGDENSNDRSK KKV
Sbjct: 33  IAKEKSTIFGGVEEWSSRGSTIESIIEGGCMTLKEIKIEGKMNKSEGDENSNDRSKFKKV 92

Query: 61  VMPVFSGIDLDSWLFRV 78
            MPVFSG DLDSWL  +
Sbjct: 93  EMPVFSGSDLDSWLLEL 109

[Close]

BLAST of MELO3C026476.1 vs. NCBI nr
Match: TYK27434.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 7.5e-09
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
          + KEKST++EG+E  SS+ +  E I+E G  TM EI+ + +++K EG+E+SNDRSK KKV
Sbjct: 28 IVKEKSTMTEGMEGSSSKGRPFESILEGGDTTMKEIESEVRISKAEGEEHSNDRSKLKKV 87

Query: 61 VMPVFSG 68
           MPVFSG
Sbjct: 88 EMPVFSG 94

[Close]

BLAST of MELO3C026476.1 vs. NCBI nr
Match: TYK29110.1 (putative polyketide hydroxylase [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 16  SSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKVVMPVFSGIDLDSWLF 75
           SSR  + +  ++       E+K +G+ NK +GDE  +D  K K V MPVF G+DLDSWLF
Sbjct: 194 SSRNTVNDSTIDGDETMTKEVKNEGQTNKADGDEPLSDSDKFKNVDMPVFCGLDLDSWLF 253

Query: 76  RVDR 80
           R DR
Sbjct: 254 RADR 257

[Close]

BLAST of MELO3C026476.1 vs. NCBI nr
Match: KAA0056408.1 (putative polyketide hydroxylase [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 16  SSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKVVMPVFSGIDLDSWLF 75
           SSR  + +  ++       E+K +G+ NK +GDE  +D  K K V MPVF G+DLDSWLF
Sbjct: 194 SSRNTVNDSTIDGDETMTKEVKNEGQTNKADGDEPLSDSDKFKNVDMPVFCGLDLDSWLF 253

Query: 76  RVDR 80
           R DR
Sbjct: 254 RADR 257

[Close]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL
Match: A0A5A7VI81 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001220 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-34
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
          MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV
Sbjct: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60

Query: 61 VMPVFSGIDLDSWLFRVDR 80
          VMPVFSGIDLDSWLFRVDR
Sbjct: 61 VMPVFSGIDLDSWLFRVDR 79

[Close]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL
Match: A0A5A7UL99 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001840 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-18
Identity = 52/77 (67.53%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1   MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
           + KEKST+  G+EE SSR   IE I+E G  T+ EIKI+GKMNK+EGDENSNDRSK KKV
Sbjct: 33  IAKEKSTIFGGVEEWSSRGSTIESIIEGGCMTLKEIKIEGKMNKSEGDENSNDRSKFKKV 92

Query: 61  VMPVFSGIDLDSWLFRV 78
            MPVFSG DLDSWL  +
Sbjct: 93  EMPVFSGSDLDSWLLEL 109

[Close]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL
Match: A0A5D3DV95 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001300 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.6e-09
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1  MTKEKSTLSEGIEELSSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKV 60
          + KEKST++EG+E  SS+ +  E I+E G  TM EI+ + +++K EG+E+SNDRSK KKV
Sbjct: 28 IVKEKSTMTEGMEGSSSKGRPFESILEGGDTTMKEIESEVRISKAEGEEHSNDRSKLKKV 87

Query: 61 VMPVFSG 68
           MPVFSG
Sbjct: 88 EMPVFSG 94

[Close]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL
Match: A0A5A7UMT6 (Putative polyketide hydroxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001620 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.9e-07
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 16  SSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKVVMPVFSGIDLDSWLF 75
           SSR  + +  ++       E+K +G+ NK +GDE  +D  K K V MPVF G+DLDSWLF
Sbjct: 194 SSRNTVNDSTIDGDETMTKEVKNEGQTNKADGDEPLSDSDKFKNVDMPVFCGLDLDSWLF 253

Query: 76  RVDR 80
           R DR
Sbjct: 254 RADR 257

[Close]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL
Match: A0A5D3E0S5 (Putative polyketide hydroxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002460 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.9e-07
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 16  SSREQLIERIVEAGGATMVEIKIDGKMNKTEGDENSNDRSKSKKVVMPVFSGIDLDSWLF 75
           SSR  + +  ++       E+K +G+ NK +GDE  +D  K K V MPVF G+DLDSWLF
Sbjct: 194 SSRNTVNDSTIDGDETMTKEVKNEGQTNKADGDEPLSDSDKFKNVDMPVFCGLDLDSWLF 253

Query: 76  RVDR 80
           R DR
Sbjct: 254 RADR 257

The following BLAST results are available for this feature:

BLAST of MELO3C026476.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065441.1	1.1e-33	100.00	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0054239.1	5.2e-18	67.53	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
TYK27434.1	7.5e-09	55.22	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa]	[more]
TYK29110.1	2.0e-06	46.88	putative polyketide hydroxylase [Cucumis melo var. makuwa]	[more]
KAA0056408.1	2.0e-06	46.88	putative polyketide hydroxylase [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C026476.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI81	5.5e-34	100.00	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7UL99	2.5e-18	67.53	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3DV95	3.6e-09	55.22	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7UMT6	9.9e-07	46.88	Putative polyketide hydroxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3E0S5	9.9e-07	46.88	Putative polyketide hydroxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C026476.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026476	MELO3C026476	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C026476.1:exon:305794	MELO3C026476.1:exon:305794	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C026476.1:cds	MELO3C026476.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C026476.1	MELO3C026476.1-protein	polypeptide