MELO3C026066.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C026066.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	rRNA 2'-O-methyltransferase fibrillarin 2
Location	chr12: 14758635 .. 14758978 (+)
Sequence length	252
RNA-Seq Expression	MELO3C026066.1
Synteny	MELO3C026066.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTCACAGTCAACTTTTTGATAAAAGTGAAAGATGGTATAGTATAACCCATACACCCAAAGATGATTTGTTTTATATTTAACTTTGTAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

mRNA sequence

ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

Coding sequence (CDS)

ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG

Protein sequence

MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA

Homology

[Close]

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 3.6e-33
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEP
Sbjct: 237 QARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEP 296

Query: 62  FERDHACVVGIYRAPKKQKAA 83
           FERDHACVVG YR PKK KAA
Sbjct: 297 FERDHACVVGGYRMPKKPKAA 317

[Close]

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-32
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEP
Sbjct: 226 QARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEP 285

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVG YR PKKQK  A
Sbjct: 286 FERDHACVVGGYRMPKKQKTPA 307

[Close]

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-26
Identity = 57/78 (73.08%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           Q RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP
Sbjct: 268 QGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEP 327

Query: 62  FERDHACVVGIYRAPKKQ 80
           +ERDHA VVG+YR P KQ
Sbjct: 328 YERDHAVVVGVYRPPPKQ 345

[Close]

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.3e-26
Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           Q RI+ALNA +FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP
Sbjct: 267 QGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEP 326

Query: 62  FERDHACVVGIYRAPKKQ 80
           +ERDHA VVG+YR P KQ
Sbjct: 327 YERDHAVVVGVYRPPPKQ 344

[Close]

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot
Match: P35549 (rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major OX=5664 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.6e-26
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNA  FL+ GGH+VISIKANCIDST+ A  V ASE+NKLK D+ KP EQV+LEP
Sbjct: 218 QARILALNAQAFLQNGGHYVISIKANCIDSTLEAPVVIASELNKLKKDKLKPLEQVSLEP 277

Query: 62  FERDHACVVGIYRAPKKQK 81
           FERDHA VVG+YR  KK K
Sbjct: 278 FERDHAVVVGVYRPVKKSK 296

[Close]

BLAST of MELO3C026066.1 vs. NCBI nr
Match: XP_016903173.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo] >TYK15456.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 61 PFERDHACVVGIYRAPKKQKAAA 84
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of MELO3C026066.1 vs. NCBI nr
Match: XP_022152767.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37
Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 61 PFERDHACVVGIYRAPKKQKAAA 84
          PFERDHACVVGIYRAPKKQK AA
Sbjct: 61 PFERDHACVVGIYRAPKKQKPAA 83

[Close]

BLAST of MELO3C026066.1 vs. NCBI nr
Match: KGN57431.2 (hypothetical protein Csa_009607 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 203 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 262

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 263 FERDHACVVGIYRAPKKQKAAA 284

[Close]

BLAST of MELO3C026066.1 vs. NCBI nr
Match: XP_022922917.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata])

HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 223 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 282

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 283 FERDHACVVGIYRAPKKQKAAA 304

[Close]

BLAST of MELO3C026066.1 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 224 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 283

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 284 FERDHACVVGIYRAPKKQKAAA 305

[Close]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL
Match: A0A5D3CYG2 (Mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00260 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 61 PFERDHACVVGIYRAPKKQKAAA 84
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL
Match: A0A1S4E4L3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103502201 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60
          MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE
Sbjct: 1  MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLE 60

Query: 61 PFERDHACVVGIYRAPKKQKAAA 84
          PFERDHACVVGIYRAPKKQKAAA
Sbjct: 61 PFERDHACVVGIYRAPKKQKAAA 83

[Close]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 223 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 282

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 283 FERDHACVVGIYRAPKKQKAAA 304

[Close]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 285

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 286 FERDHACVVGIYRAPKKQKAAA 307

[Close]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP
Sbjct: 226 QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 285

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVGIYRAPKKQKAAA
Sbjct: 286 FERDHACVVGIYRAPKKQKAAA 307

[Close]

BLAST of MELO3C026066.1 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 141.7 bits (356), Expect = 2.6e-34
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEP
Sbjct: 237 QARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEP 296

Query: 62  FERDHACVVGIYRAPKKQKAA 83
           FERDHACVVG YR PKK KAA
Sbjct: 297 FERDHACVVGGYRMPKKPKAA 317

[Close]

BLAST of MELO3C026066.1 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-33
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QARILALNAS+FLK GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEP
Sbjct: 226 QARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEP 285

Query: 62  FERDHACVVGIYRAPKKQKAAA 84
           FERDHACVVG YR PKKQK  A
Sbjct: 286 FERDHACVVGGYRMPKKQKTPA 307

[Close]

BLAST of MELO3C026066.1 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.3e-21
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 2   QARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEP 61
           QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+ 
Sbjct: 216 QANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDS 275

Query: 62  FERDHACVVGIYRAPKK 79
            E  HACV G YR P+K
Sbjct: 276 CEEKHACVFGGYRLPRK 292

The following BLAST results are available for this feature:

BLAST of MELO3C026066.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	3.6e-33	86.42	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	5.3e-32	84.15	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	1.9e-26	73.08	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	4.3e-26	71.79	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P35549	9.6e-26	73.42	rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major OX=5664 PE=3 SV=1	[more]

BLAST of MELO3C026066.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903173.1	1.8e-37	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
XP_022152767.1	6.8e-37	98.80	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
KGN57431.2	6.8e-37	100.00	hypothetical protein Csa_009607 [Cucumis sativus]	[more]
XP_022922917.1	6.8e-37	100.00	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc...	[more]
XP_023552409.1	6.8e-37	100.00	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]

BLAST of MELO3C026066.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYG2	8.7e-38	100.00	Mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo var...	[more]
A0A1S4E4L3	8.7e-38	100.00	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1JA27	3.3e-37	100.00	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A0A0L9V7	3.3e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1	[more]
A0A0A0KLF9	3.3e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1	[more]

BLAST of MELO3C026066.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	2.6e-34	86.42	fibrillarin 2	[more]
AT5G52470.1	3.7e-33	84.15	fibrillarin 1	[more]
AT5G52490.1	4.3e-21	61.04	Fibrillarin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 1..75 e-value: 9.0E-10 score: -26.3
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 2..74 e-value: 2.1E-27 score: 95.7
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 1..75 e-value: 4.3E-25 score: 90.3
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 2..82
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 2..82
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 3..73

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C026066	MELO3C026066	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C026066.1:exon:354485	MELO3C026066.1:exon:354485	exon
MELO3C026066.1:exon:354486	MELO3C026066.1:exon:354486	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C026066.1:cds	MELO3C026066.1:cds	CDS
MELO3C026066.1:cds	MELO3C026066.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C026066.1	MELO3C026066.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding