MELO3C026066 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTCACAGTCAACTTTTTGATAAAAGTGAAAGATGGTATAGTATAACCCATACACCCAAAGATGATTTGTTTTATATTTAACTTTGTAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG ATGCAGGCAAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTAAAAGCAGATCAGTTCAAACCGACTGAGCAAGTAACACTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGCTGCCTAG MQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAAA Homology
BLAST of MELO3C026066 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2) HSP 1 Score: 141.7 bits (356), Expect = 3.6e-33 Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 5.3e-32 Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.9e-26 Identity = 57/78 (73.08%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 4.3e-26 Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy Swiss-Prot
Match: P35549 (rRNA 2'-O-methyltransferase fibrillarin OS=Leishmania major OX=5664 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 9.6e-26 Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of MELO3C026066 vs. NCBI nr
Match: XP_016903173.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo] >TYK15456.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo var. makuwa]) HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. NCBI nr
Match: XP_022152767.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia]) HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of MELO3C026066 vs. NCBI nr
Match: KGN57431.2 (hypothetical protein Csa_009607 [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. NCBI nr
Match: XP_022922917.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata]) HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 163.7 bits (413), Expect = 6.8e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy TrEMBL
Match: A0A5D3CYG2 (Mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00260 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy TrEMBL
Match: A0A1S4E4L3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103502201 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.7e-38 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy TrEMBL
Match: A0A0A0L9V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183360 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of MELO3C026066 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 ) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-34 Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of MELO3C026066 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 ) HSP 1 Score: 137.9 bits (346), Expect = 3.7e-33 Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of MELO3C026066 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein ) HSP 1 Score: 97.8 bits (242), Expect = 4.3e-21 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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