MELO3C025066.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C025066.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Location	chr09: 14803381 .. 14803902 (+)
Sequence length	522
RNA-Seq Expression	MELO3C025066.1
Synteny	MELO3C025066.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

mRNA sequence

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Coding sequence (CDS)

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Protein sequence

MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQLQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATFI

Homology

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BLAST of MELO3C025066.1 vs. NCBI nr
Match: YP_004841783.1 (photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo] >YP_009860073.1 photosystem I P700 apoprotein A1 [Cucumis melo subsp. agrestis] >ASY96622.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. conomon] >ASY96710.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. makuwa] >ASY96797.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. momordica] >ASY96884.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. dudaim] >ASY96971.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. cantalupo] >ASY97145.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. inodorus] >ASY97319.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. flexuosus] >QJF46383.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. NCBI nr
Match: YP_009751738.1 (photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QJR52956.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. NCBI nr
Match: YP_009447450.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 PsaA [Cucurbita ecuadorensis] >ALO22332.1 PsaA [Cucurbita maxima subsp. andreana] >ATY69900.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. NCBI nr
Match: YP_009447535.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_009505080.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita pepo] >ALO21767.1 PsaA [Cucurbita argyrosperma] >ALO21803.1 PsaA [Cucurbita argyrosperma var. palmeri] >ALO21842.1 PsaA [Cucurbita argyrosperma subsp. sororia] >ALO21919.1 PsaA [Cucurbita cordata] >ALO21989.1 PsaA [Cucurbita digitata] >ALO22130.1 PsaA [Cucurbita ficifolia] >ALO22171.1 PsaA [Cucurbita foetidissima] >ALO22221.1 PsaA [Cucurbita lundelliana] >ALO22468.1 PsaA [Cucurbita okeechobeensis] >ALO22517.1 PsaA [Cucurbita okeechobeensis subsp. martinezii] >ALO22544.1 PsaA [Cucurbita pepo subsp. fraterna] >ALO22638.1 PsaA [Cucurbita pepo subsp. ovifera] >ALO22714.1 PsaA [Cucurbita pepo var. ozarkana] >ALO22742.1 PsaA [Cucurbita pepo subsp. pepo] >ALO22858.1 PsaA [Cucurbita pepo var. texana] >ALO22905.1 PsaA [Cucurbita pedatifolia])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. NCBI nr
Match: AHM91214.1 (photosystem I P700 apoprotein A1, partial [Lagenaria siceraria])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 6.3e-88
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAP ITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPRITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot
Match: P58310 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=psaA PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 8.2e-88
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFIS 166
           LQP+FAQWIQNTH LAP ITAPGATTGTSLTWGGGDL    N ++
Sbjct: 476 LQPIFAQWIQNTHALAPGITAPGATTGTSLTWGGGDLVAVGNKVA 520

[Close]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot
Match: Q6EW48 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.1e-87
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQP+FAQWIQNTH LAPS TAPGAT GTSLTWGGGDL
Sbjct: 476 LQPIFAQWIQNTHALAPSATAPGATAGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot
Match: Q0G9W2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-86
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPS TAPGATT TSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSATAPGATTSTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot
Match: A0ZZ35 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 GN=psaA PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-86
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAP  TAPGAT  TSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPGATAPGATASTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL
Match: A0A249RZM5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensis OX=3658 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL
Match: A0A1S4EU09 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo OX=3656 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL
Match: A0A249RXK9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. agrestis OX=217619 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL
Match: A0A286NG17 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. flexuosus OX=1120798 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL
Match: A0A249RZ27 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. dudaim OX=2034236 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]

BLAST of MELO3C025066.1 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-85
Identity = 146/157 (92.99%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDY TQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PT RYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTNRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAP +TAPG T  TSLTWGGG+L
Sbjct: 476 LQPVFAQWIQNTHALAPGVTAPGETASTSLTWGGGEL 512

[Close]

BLAST of MELO3C025066.1 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 2   LGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDP 61
           LG +T +VA HMY++P Y ++A D+ TQ +L+THH +I GF++ GA AH AIF +RDY+P
Sbjct: 341 LGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNP 400

Query: 62  TTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQL 121
               +++L R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I +
Sbjct: 401 EQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILI 460

Query: 122 QPVFAQWIQNTH--------TLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATFI 174
           +P+FAQWIQ+ H         L  S + P    G S+ W  G L    N I++ + + F+
Sbjct: 461 EPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWL----NAINENSNSLFL 510

The following BLAST results are available for this feature:

BLAST of MELO3C025066.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841783.1	3.3e-86	99.36	photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo] >YP_009860073.1 phot...	[more]
YP_009751738.1	1.3e-85	98.73	photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photo...	[more]
YP_009447450.1	1.3e-85	98.73	photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 Ps...	[more]
YP_009447535.1	1.3e-85	98.73	photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_00950508...	[more]
AHM91214.1	1.3e-85	98.73	photosystem I P700 apoprotein A1, partial [Lagenaria siceraria]	[more]

BLAST of MELO3C025066.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD89	6.3e-88	98.09	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa...	[more]
P58310	8.2e-88	92.73	Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=ps...	[more]
Q6EW48	9.1e-87	95.54	Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA...	[more]
Q0G9W2	2.0e-86	96.18	Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA ...	[more]
A0ZZ35	2.7e-86	95.54	Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 G...	[more]

BLAST of MELO3C025066.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RZM5	1.6e-86	99.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensi...	[more]
A0A1S4EU09	1.6e-86	99.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo OX=3656 GN=psaA P...	[more]
A0A249RXK9	1.6e-86	99.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. agrestis O...	[more]
A0A286NG17	1.6e-86	99.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. flexuosus OX...	[more]
A0A249RZ27	1.6e-86	99.36	Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. dudaim OX=20...	[more]

BLAST of MELO3C025066.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00350.1	3.9e-85	92.99	Photosystem I, PsaA/PsaB protein	[more]
ATCG00340.1	1.6e-38	43.33	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 78..100 score: 84.2 coord: 30..56 score: 73.8
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 1..157 e-value: 5.1E-79 score: 266.3
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 1..171 e-value: 2.5E-93 score: 315.2
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 1..165
IPR006243	Photosystem I PsaA	PANTHER	PTHR30128:SF60	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 1..160
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 1..160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C025066	MELO3C025066	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C025066.1:exon:271943	MELO3C025066.1:exon:271943	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C025066.1:cds	MELO3C025066.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C025066.1	MELO3C025066.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding