MELO3C025066 (gene) Melon (DHL92) v4

Overview
NameMELO3C025066
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Locationchr09: 14803381 .. 14803902 (+)
RNA-Seq ExpressionMELO3C025066
SyntenyMELO3C025066
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

mRNA sequence

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Coding sequence (CDS)

ATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGCAATGCCCCCTTATCCATATCTAGCTACCGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGGCTTTCACAGTTTTGGTTTGTATATTCATAACGATACCATGAGTGCTTTAGGGCATCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCATACTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGGTGGTGATTTAGACCTTGCTGAAAATTTTATCTCAAAAACAGCTAAAGCAACTTTCATTTAA

Protein sequence

MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQLQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATFI
Homology
[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: YP_004841783.1 (photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo] >YP_009860073.1 photosystem I P700 apoprotein A1 [Cucumis melo subsp. agrestis] >ASY96622.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. conomon] >ASY96710.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. makuwa] >ASY96797.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. momordica] >ASY96884.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. dudaim] >ASY96971.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. cantalupo] >ASY97145.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. inodorus] >ASY97319.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo var. flexuosus] >QJF46383.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: YP_009751738.1 (photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QJR52956.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: YP_009447450.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 PsaA [Cucurbita ecuadorensis] >ALO22332.1 PsaA [Cucurbita maxima subsp. andreana] >ATY69900.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: YP_009447535.1 (photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_009505080.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita pepo] >ALO21767.1 PsaA [Cucurbita argyrosperma] >ALO21803.1 PsaA [Cucurbita argyrosperma var. palmeri] >ALO21842.1 PsaA [Cucurbita argyrosperma subsp. sororia] >ALO21919.1 PsaA [Cucurbita cordata] >ALO21989.1 PsaA [Cucurbita digitata] >ALO22130.1 PsaA [Cucurbita ficifolia] >ALO22171.1 PsaA [Cucurbita foetidissima] >ALO22221.1 PsaA [Cucurbita lundelliana] >ALO22468.1 PsaA [Cucurbita okeechobeensis] >ALO22517.1 PsaA [Cucurbita okeechobeensis subsp. martinezii] >ALO22544.1 PsaA [Cucurbita pepo subsp. fraterna] >ALO22638.1 PsaA [Cucurbita pepo subsp. ovifera] >ALO22714.1 PsaA [Cucurbita pepo var. ozarkana] >ALO22742.1 PsaA [Cucurbita pepo subsp. pepo] >ALO22858.1 PsaA [Cucurbita pepo var. texana] >ALO22905.1 PsaA [Cucurbita pedatifolia])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. NCBI nr
Match: AHM91214.1 (photosystem I P700 apoprotein A1, partial [Lagenaria siceraria])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 6.3e-88
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAP ITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPRITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match: P58310 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=psaA PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 8.2e-88
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDLDLAENFIS 166
           LQP+FAQWIQNTH LAP ITAPGATTGTSLTWGGGDL    N ++
Sbjct: 476 LQPIFAQWIQNTHALAPGITAPGATTGTSLTWGGGDLVAVGNKVA 520

[Close]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match: Q6EW48 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.1e-87
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQP+FAQWIQNTH LAPS TAPGAT GTSLTWGGGDL
Sbjct: 476 LQPIFAQWIQNTHALAPSATAPGATAGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match: Q0G9W2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-86
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAPS TAPGATT TSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHALAPSATAPGATTSTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match: A0ZZ35 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 GN=psaA PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-86
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTI+VAHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAP  TAPGAT  TSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPGATAPGATASTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match: A0A249RZM5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensis OX=3658 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match: A0A1S4EU09 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo OX=3656 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match: A0A249RXK9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. agrestis OX=217619 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match: A0A286NG17 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. flexuosus OX=1120798 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match: A0A249RZ27 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. dudaim OX=2034236 GN=psaA PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL
Sbjct: 476 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 512

[Close]
BLAST of MELO3C025066 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-85
Identity = 146/157 (92.99%), Postives = 149/157 (94.90%), Query Frame = 0 

Query: 1   MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 60
           MLGSLTIIVAHHMY+MPPYPYLATDY TQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD
Sbjct: 356 MLGSLTIIVAHHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYD 415

Query: 61  PTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQ 120
           PT RYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALG PQDMFSDTAIQ
Sbjct: 416 PTNRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQ 475

Query: 121 LQPVFAQWIQNTHTLAPSITAPGATTGTSLTWGGGDL 158
           LQPVFAQWIQNTH LAP +TAPG T  TSLTWGGG+L
Sbjct: 476 LQPVFAQWIQNTHALAPGVTAPGETASTSLTWGGGEL 512

[Close]
BLAST of MELO3C025066 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38
Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 0 

Query: 2   LGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDP 61
           LG +T +VA HMY++P Y ++A D+ TQ +L+THH +I GF++ GA AH AIF +RDY+P
Sbjct: 341 LGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNP 400

Query: 62  TTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGHPQDMFSDTAIQL 121
               +++L R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I +
Sbjct: 401 EQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILI 460

Query: 122 QPVFAQWIQNTH--------TLAPSITAPGATTGTSLTWGGGDLDLAENFISKTAKATFI 174
           +P+FAQWIQ+ H         L  S + P    G S+ W  G L    N I++ + + F+
Sbjct: 461 EPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWL----NAINENSNSLFL 510

The following BLAST results are available for this feature:
BLAST of MELO3C025066 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004841783.13.3e-8699.36photosystem I P700 apoprotein A1 [Cucumis melo subsp. melo] >YP_009860073.1 phot... [more]
YP_009751738.11.3e-8598.73photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum] >QIT04471.1 photo... [more]
YP_009447450.11.3e-8598.73photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima] >ALO22061.1 Ps... [more]
YP_009447535.11.3e-8598.73photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata] >YP_00950508... [more]
AHM91214.11.3e-8598.73photosystem I P700 apoprotein A1, partial [Lagenaria siceraria][more]
BLAST of MELO3C025066 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QD896.3e-8898.09Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psa... [more]
P583108.2e-8892.73Photosystem I P700 chlorophyll a apoprotein A1 OS=Lotus japonicus OX=34305 GN=ps... [more]
Q6EW489.1e-8795.54Photosystem I P700 chlorophyll a apoprotein A1 OS=Nymphaea alba OX=34301 GN=psaA... [more]
Q0G9W22.0e-8696.18Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota OX=4039 GN=psaA ... [more]
A0ZZ352.7e-8695.54Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium barbadense OX=3634 G... [more]
BLAST of MELO3C025066 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A249RZM51.6e-8699.36Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. cantalupensi... [more]
A0A1S4EU091.6e-8699.36Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo OX=3656 GN=psaA P... [more]
A0A249RXK91.6e-8699.36Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo subsp. agrestis O... [more]
A0A286NG171.6e-8699.36Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. flexuosus OX... [more]
A0A249RZ271.6e-8699.36Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis melo var. dudaim OX=20... [more]
BLAST of MELO3C025066 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00350.13.9e-8592.99Photosystem I, PsaA/PsaB protein [more]
ATCG00340.11.6e-3843.33Photosystem I, PsaA/PsaB protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPRINTSPR00257PHOTSYSPSAABcoord: 78..100
score: 84.2
coord: 30..56
score: 73.8
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 1..157
e-value: 5.1E-79
score: 266.3
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10Photosystem I PsaA/PsaBcoord: 1..171
e-value: 2.5E-93
score: 315.2
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 1..165
IPR006243Photosystem I PsaAPANTHERPTHR30128:SF60PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1coord: 1..160
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025066.1MELO3C025066.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0046872 metal ion binding