MELO3C018923.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGATGTATCGGCGACTTTGAAGATGGCGATTGACTGTGCTTCGGCAGTGGCAATGGGTGCATCGGTGGTTATGACAGTGGCACCAATGTTGACCCCAGTTGTTGCTCCTGTCATGGCTTCAACCACTGTTGCTACATCGGTCACTGGTGTTATGGAGATTTTAGGATTTTGAATGGGAGATGTATCGGCGACTTTGAAGATGGCGATTGACTGTGCTTCGGCAGTGGCAATGGGTGCATCGGTGGTTATGACAGTGGCACCAATGTTGACCCCAGTTGTTGCTCCTGTCATGGCTTCAACCACTGTTGCTACATCGGTCACTGGTGTTATGGAGATTTTAGGATTTTGA ATGGGAGATGTATCGGCGACTTTGAAGATGGCGATTGACTGTGCTTCGGCAGTGGCAATGGGTGCATCGGTGGTTATGACAGTGGCACCAATGTTGACCCCAGTTGTTGCTCCTGTCATGGCTTCAACCACTGTTGCTACATCGGTCACTGGTGTTATGGAGATTTTAGGATTTTGA MGDVSATLKMAIDCASAVAMGASVVMTVAPMLTPVVAPVMASTTVATSVTGVMEILGF Homology
BLAST of MELO3C018923.jh1.t1 vs. NCBI nr
Match: KAA0054811.1 (hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 7.10e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. NCBI nr
Match: TYJ99647.1 (hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 2.04e-25 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. NCBI nr
Match: TYK09492.1 (hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 6.92e-15 Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. NCBI nr
Match: KGN65426.1 (hypothetical protein Csa_019847 [Cucumis sativus]) HSP 1 Score: 63.5 bits (153), Expect = 1.72e-11 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. NCBI nr
Match: KAA0068093.1 (LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa] >TYK26075.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 8.55e-11 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7UMM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00990 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.44e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3BKI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00240 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.87e-26 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3CE01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00920 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.35e-15 Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. ExPASy TrEMBL
Match: A0A0A0LZP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G420870 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 8.32e-12 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of MELO3C018923.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DRF6 (LPS-induced tumor necrosis factor alpha factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00340 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.14e-11 Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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