Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAATGAGATAGAGAAGGAAGGGACCAAAGGAACATTGCTTGCTTGACGCGCACACAAGAAAACACAAAATACCGAGTCAGCGGCGGGCAACCCATTGCCCATTGCCACGAATTCAAACTTCAACTACTTTCAATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGGTTCACCCTACTATCTCCTCCTTGTACGTTTTCCTTTTTCCTCGCATTCTGTGATGGGGTATTTTTCTTTAATCCGAATCTCGATCTTGAACTTCCCAGATCCTGAAACGACTCTTGGAAGTGAAAAAATGGAGTTTGTAATGAAAAGAATCTGTATGTTGAATGTTTTTGTTTTTGCACGCCAGGTGTTTGATGTAATGACTGTGATGGATTTCTTTGCTTAGTTGTAAAATATGTTGCTAGTTGCTGCTACTGCTATGATTAGTTTGTGGCATCTCTTTGTTTTTGTTGTCTGGATGATTCTTGCTTGGAAGAAAGTTGTTAATTTCACTATACTTCCAATGTATGGGATTTATAACCTGAGAGATAGAGGATTAGTAACATGCAAAAGTTGATATTAATAGAGAGAAATGTACGAGCACACGCAGGACTATTGAATTCGATATGTGCTGATCTTTGTGTTTGAATTCAAAAGATGAGATTGCTGAGAAAATGTGTCAATTTTCGTTGAATGGAGGACTCTCATGATGTGATATGCTATGGCTACTACAATATTGTTGCATATGCATAAAAGTTGGCTTAAACGAAATAGTAGGCTTAAACTTGTGGTTTTCTAACTAAAAAACCCGAATCAAAGAGAGAAAGAGTGCCTATTCTCTCTTGAAGTCACGCGATCTGGTTAGTCTATGAATTGGAAACTATCAGTTTGGGAACGTAGTTGCTATGTAAACCAGCAGAAAAGAAACGAAAAGATTCTTATCTCTCTTAGACCATCTCAAGTCAGATTCATAACCAATCTGAGAGTCGGGGAAGACACAATATTTCCTTTTTATTAGATCTGCCCAATTCTTACATATTATGCAAGATCTCTTTAAATTTCAAATAAATGGTGGGTTGACATTAACTTTAAGCAGGAGAAAGAGGAAGGTGTAATCTCTTCAATTTCTCATCTAAGTAAGGTTAAACTTTAGATGATTCCTTCCTTATTTTCTCGAATGGTTTGGATTAGTTGATAATTGGTTCATTGATGATGAGGTAATAACCAAGATCACCTATTCAATTTCCTTTCCAAGTGAGCTTACTAGTCTTAATCTGAAGTCTGGCTATATACTTTCTTGCGCTTCTCTCTGAATTGATCATAGTTCTCTTTTTTTCTTCATTACATTGTGCTCGAAACTAGAATACCAGTATGGGTGACATTTACTTCAGCCACATGCCATGCAGTTGAATTTACTTTATTGGTGTCAAACATTAGTTGTCAGAGTGAGCTTAGCTCGACAAAACTAGCATGAACTTTCTCCTTTGAGGAGGGCGGTTGTTTGATTTACCACCCCAATTTTTGTTATGCAATTAAGACATCTACTCCTTCCTACAAGACCTTTGAACCCCTTCTTTTCACCCAAAGTTTTTATACTGAAAAGAAAACATTAAACATCAGTTTGCAATTGATGTGTATTATTCCATGCATTGCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGATAGTGAGATGTTGATTCTTTAAACAGTTCATTCTCTCATAACCGGTTAAAGCTCATTCAGGTAAATATGGTTGGTTGCTGCAGAATTTTCTTTAAGACTATTTTGTAGGTAAATGATTTATTGCGGTAGATTTGTTTGCTTGTAATATAATTCTAAGAATGTTAGCTCATATAATGTTCATTTTTTTTGTTGGTAAGTTTTATTATTATTATTTAAGAAGTCGAACTTCTGAGGCCGTTGATAATGA
mRNA sequence
AGAAAAATGAGATAGAGAAGGAAGGGACCAAAGGAACATTGCTTGCTTGACGCGCACACAAGAAAACACAAAATACCGAGTCAGCGGCGGGCAACCCATTGCCCATTGCCACGAATTCAAACTTCAACTACTTTCAATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGATAGTGAGATGTTGATTCTTTAAACAGTTCATTCTCTCATAACCGGTTAAAGCTCATTCAGGTAAATATGGTTGGTTGCTGCAGAATTTTCTTTAAGACTATTTTGTAGGTAAATGATTTATTGCGGTAGATTTGTTTGCTTGTAATATAATTCTAAGAATGTTAGCTCATATAATGTTCATTTTTTTTGTTGGTAAGTTTTATTATTATTATTTAAGAAGTCGAACTTCTGAGGCCGTTGATAATGA
Coding sequence (CDS)
ATGACGGCCTCACGAGAGCCACTCCCATCTTCATCTTCATCAACTTACTTACCTCCAAATGATTCACTACCTAAACGCTTCAAGGTCTTGTGGCGGATTCTATTGATTTCCAATTTCGCGCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAGACATTTTAATGAGCTGGAGAATGACCAGGTAGAAAAACAAAGTGATAGTGAAATTATTACAGAAATCCCTTCAACAATTATGGTGGATACGACTGGCATAGTTACTGAGAACGTGTTGGAAGATCAGCAGCAAGAACCAAACCAAGGGGTGGTTAGTGGTTGGAGAGAAAAGTTAGGTTTTAGTAGAAAAATGAATTGA
Protein sequence
MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Homology
BLAST of MELO3C015467.1 vs. NCBI nr
Match:
XP_008450851.1 (PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo])
HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND
Sbjct: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
Query: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Sbjct: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117
BLAST of MELO3C015467.1 vs. NCBI nr
Match:
XP_004135711.1 (uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus])
HSP 1 Score: 216.9 bits (551), Expect = 9.6e-53
Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
MT R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1 MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
Query: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRK+N
Sbjct: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117
BLAST of MELO3C015467.1 vs. NCBI nr
Match:
XP_011659979.1 (uncharacterized protein LOC101210247 isoform X2 [Cucumis sativus] >KGN66613.2 hypothetical protein Csa_007112 [Cucumis sativus])
HSP 1 Score: 142.5 bits (358), Expect = 2.3e-30
Identity = 71/74 (95.95%), Postives = 74/74 (100.00%), Query Frame = 0
Query: 44 YMFASARKRHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVV 103
YMFASARKRHFN+LENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVV
Sbjct: 21 YMFASARKRHFNQLENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVV 80
Query: 104 SGWREKLGFSRKMN 118
SGWREKLGFSRK+N
Sbjct: 81 SGWREKLGFSRKVN 94
BLAST of MELO3C015467.1 vs. NCBI nr
Match:
XP_023530326.1 (uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 139.8 bits (351), Expect = 1.5e-29
Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
M R L S SS LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+ ++END
Sbjct: 1 MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60
Query: 61 Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
+ +EK SDSEI+ EIPST+MVDTTGIVTEN+ EDQ Q+P +V GWRE
Sbjct: 61 EAEKDLGQLENDGIEKCSDSEIM-EIPSTLMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120
BLAST of MELO3C015467.1 vs. NCBI nr
Match:
KAG6588036.1 (hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021933.1 hypothetical protein SDJN02_15661 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 139.0 bits (349), Expect = 2.5e-29
Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
M R L S SS LPPND LP+RFKV+WR+LLISNFALSAYMFASARK+ ++END
Sbjct: 1 MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEND 60
Query: 61 Q------------VEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
+ +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P +V GWRE
Sbjct: 61 EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120
BLAST of MELO3C015467.1 vs. ExPASy TrEMBL
Match:
A0A1S3BR82 (uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND
Sbjct: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
Query: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN
Sbjct: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 117
BLAST of MELO3C015467.1 vs. ExPASy TrEMBL
Match:
A0A0A0M1X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 4.6e-53
Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEND 60
MT R PLPSSSSSTYLPPNDSLPKRFKVLWR+LLISNFALSAYMFASARKRHFN+LEND
Sbjct: 1 MTDPRAPLPSSSSSTYLPPNDSLPKRFKVLWRVLLISNFALSAYMFASARKRHFNQLEND 60
Query: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWREKLGFSRKMN 118
QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEP+QGVVSGWREKLGFSRK+N
Sbjct: 61 QVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPDQGVVSGWREKLGFSRKVN 117
BLAST of MELO3C015467.1 vs. ExPASy TrEMBL
Match:
A0A6J1HYA0 (uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467730 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 2.7e-29
Identity = 78/127 (61.42%), Postives = 89/127 (70.08%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARK--------- 60
M R L S SS LPPND LP+RFKV+WR+LLISNFALSAYMFASARK
Sbjct: 1 MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMESD 60
Query: 61 ---RHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
+ +LEND +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P +V GWRE
Sbjct: 61 EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENIPEDQHQKPFHWIVDGWRE 120
BLAST of MELO3C015467.1 vs. ExPASy TrEMBL
Match:
A0A6J1EIP0 (uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC111433716 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.0e-28
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 0
Query: 1 MTASREPLPSSSSSTYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARK--------- 60
M R L S SS L PND LP+RFKV+WR+LLISNFALSAYMFASARK
Sbjct: 1 MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENN 60
Query: 61 ---RHFNELENDQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQGVVSGWRE 116
+ +LEND +EK SDSEI+ EIPST MVDTTGIVTEN+ EDQ Q+P +V GWRE
Sbjct: 61 EAEKDLGQLENDGIEKCSDSEIM-EIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWRE 120
BLAST of MELO3C015467.1 vs. ExPASy TrEMBL
Match:
A0A6J1D315 (uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016544 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 3.7e-26
Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 0
Query: 1 MTASREPLPSSSS-STYLPPNDSLPKRFKVLWRILLISNFALSAYMFASARKRHFNELEN 60
MT R PLPSSSS LPPND LP+RFKV+WR+LLISNFAL+AYMFA+ARK+ +E
Sbjct: 1 MTDPRAPLPSSSSPPPPLPPNDLLPRRFKVIWRVLLISNFALAAYMFANARKKDLGRMEK 60
Query: 61 DQVEKQSDSEIITEIPSTIMVDTTGIVTENVLEDQQQEPNQ 101
D VEK SD E++T IPST+MVDTT I EN+ ED Q+EP Q
Sbjct: 61 DPVEKHSDGEVMTNIPSTLMVDTTAIAAENISEDHQREPFQ 101
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008450851.1 | 3.2e-56 | 100.00 | PREDICTED: uncharacterized protein LOC103492320 [Cucumis melo] | [more] |
XP_004135711.1 | 9.6e-53 | 94.02 | uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus] | [more] |
XP_011659979.1 | 2.3e-30 | 95.95 | uncharacterized protein LOC101210247 isoform X2 [Cucumis sativus] >KGN66613.2 hy... | [more] |
XP_023530326.1 | 1.5e-29 | 60.63 | uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo] | [more] |
KAG6588036.1 | 2.5e-29 | 60.63 | hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BR82 | 1.5e-56 | 100.00 | uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=... | [more] |
A0A0A0M1X9 | 4.6e-53 | 94.02 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1 | [more] |
A0A6J1HYA0 | 2.7e-29 | 61.42 | uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1EIP0 | 3.0e-28 | 60.63 | uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC1114337... | [more] |
A0A6J1D315 | 3.7e-26 | 65.35 | uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C015467.1:exon:40639 | MELO3C015467.1:exon:40639 | exon |
MELO3C015467.1:exon:40638 | MELO3C015467.1:exon:40638 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C015467.1:three_prime_utr | MELO3C015467.1:three_prime_utr | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C015467.1:cds | MELO3C015467.1:cds | CDS |
MELO3C015467.1:cds | MELO3C015467.1:cds_2 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C015467.1:five_prime_utr | MELO3C015467.1:five_prime_utr | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
MELO3C015467.1 | MELO3C015467.1-protein | polypeptide |