MELO3C009595.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C009595.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	serine/arginine-rich SC35-like splicing factor SCL33
Location	chr04: 29745994 .. 29749339 (-)
Sequence length	1036
RNA-Seq Expression	MELO3C009595.1
Synteny	MELO3C009595.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATCCAACAATTTTGCTCTTCCAGCTTGAACGAGGCGCCTCCGTTTGCTTCATCGGTTCTCCGATTCTCAGGTTTTTGACTTATTCTTTACTTTTTCAATATCTCTATATTTTCTCTGATGGAGATTACATTTGTACGAGTTTTTATTCGAGAATTGCTGATGATAAATATTATTATGCATGAGAATTTTTCCTTTTTTTTTTTTTATTTAATGCCGAATTCTGTTTGATTTCCACTTGATCTCGTTCGAAGATCGTTAGATGTGAATGAAGCTGCAATTATAGCCGTCGTGTGTGTTTCCCTGTGTATGGAAATATTTTGACTTGTTCGAAATTGATCTCTTTAGCTCTGAGGAAATATTGGAGCGGTTGATCGAAGGAAAAGCTTATATTGCTTTCGATAAAATTTATTAGGCTGTTTTTGGTTGATTGTGTGTGTTATTTCTAAATAGCAGATATCGTTTTTGTTTTCTAAATAAATAGTAGTCTGTTACTGATTCTTTCGTTAATCTGTCGTATGGTGGTACCTTGCTGATTGATTTGTTAGTGTCTGCAAACTTAGGCTTGTCTGCATCTTAATGTTCAGCACATTTGTTATTAAAATCTTGATTTATTTCAATTTTCTTCGTGTTGTTAAGGAAATCGAAAATGAGAGGTAGAAGTTACAGTTACAGTCCATCACCACCAAGAAGTTATGGCAGGAGATATCGTAGCCCTAGTCCAAGGAGTCGTGGAGGTCGTAGAAGGGACCTGCCAACAAGTCTTTTGGTTAGGAACTTGAGGCACGACTGCAGGTTTGTGACTGCATTCTATATTTCGTGGCTATTTCATTTGCCTGGTCTTTTATACATGAAATTGTGTGTTGGTTCTTCGTCTCTCATCACATATATTACATGCATGCGATGGAAAATGCTAAGGAACGCTTTATTTTGGAGAATACAAAGGGAAAAGGAGATTGTGTTTGGTTTTTTTCTCTATTGAGTTGATAAACTTTTTTATTCGTATGTACTTTGCAGGCCAGAGGACCTACGTGGATTATTTGGGCGGTTTGGTCCTCTCAAGGACATTTACTTGCCACGAGATTATTATTCTGGGTAGGGTACTTTGGAAGATCGTTATATTGATTTTCTATGCATTTGGTGCGTATGCATGTATGGATGTTTTTCCTGGATGTTTTAACTCATTTTAGTCCTTTAGTTTTGGACGCATCTGATCTACTTTACATATTTGTAAATATGTTTTTATTGATGGTTGTTCCTAGTGATTGCTTAATGGTGTGGAAATGGTCCTCTGTTTTCAATTATTTGGTTTTCCAATAATAACATACAATCTGTTTATGGAGTTTGGTTGTTTTTATTGAAAGTACTAGTGTTGAAGACAACCAATGAAGTAATAAGAGTATCTTGTGGAAGACAAGAAGCAAGTAATTTGTTTATTGTGTTGAAGACATTCAAGTAAGTTCTGATGACTTAATGTGTACATGAAGATTCGGTGGAAGTTGGGTTAGAGTACATTGAGAAGAAGTTCAAGTCTTGAAGAATTTCATCTCAATTTTTTCTTAGCCACTCAGAAGGTTAGCATGGTGATGTTAATATTCTCTTGTTAGAGCTCTCTGTCGATGTTTCTGTCACTCGCAATCGATGGATTAATGATCAATGATGCCACTGGTTTAAGTGACATTTTCTGAAATTTTCTGAATCAGTTAACATCCTTTGTTAAAAATTGTATTATGAACACTAAAATGTTTGTGACTGCAGAGAACCACGTGGTTTTGGATTCGTTCAGTTCGTTGATGCCGCTGATGCTGCTGATGCCAAGTATGAATTGGATGGCCAAGTTCTCCTGGGTCATGAACTAACTGTTGTGTTTGCTGAGGAGAACAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATCAAGGTTGCTATCTCTTTCCTTAACTGTTTTTTAATAACCAATTTCTGTTGCCAAGCTAGGATTGTATCTTTTCGAAATTCTCTAGAAGCATCCTCAAACTTCTCCTATATCTGTAAAGTATCTTTAGAGACTGAGGTACAACCAGAGCATTGGTCCAGACAGTTTTCATGTCTTTGAAAATTTGACCAAAAAGATGCATTATTGATGGCAAATCGTGTATGTTACTAGGGATGCACTAGTGCTAATATATTGGGAGGATTTGGGGAAAATACATGGAAGAGATGTAAAGTTACAAAAAACCTGCCTTCTTTTACATAAATGGAAGAGATGTTACTGCTCTTCACTCGTCGAACGATGTATGGTAATTGAGTGTTGAACTTACCATGAAATATAGACCAAATAAAATGTAGGAATCTGTAGGAATCTTAAGTTTCCATCTCTCGGAAGAAAATTCCAGAACGAAGTTGATTCCACTAAAAAAGAATTTAAGTACTTGAGTAAATTGACTGTAGCCATTTGATGATACCTATCACCCATCGACCATCGTTGTGCTTTCAGTCAAGGGAAAAGGAAGTTGTATGTTTGATTCAAAATTGCCTCTGGCTTCGTACTCTATCCTTGGCCTGCTCTTTTTTGTTTCCTTTGTGAAATGTTTCTGGCTGTTAGCGGCAACAATCTTTTGAGGAGTCCTTTATTAATTGTAAATATAAGTACTGATTATTATGGTTCGTGTGTGAAATTGTTAACAGGGGTCGGTCCTACAGTTACAGCCGCCGGCATTCACCGTTGCGATATTCACGATCACCACACTATGATCGAAAATATTCACGTAGTCCTGAGTATTATTCCCCTGCACGGTCCAGACGATATTCAAGGTGAGTGGTTATAATTTGTACTCTTCTCTCATTTATGATTATTTACTCCAAAAGAAACGGGGGGCAGAGGGGTGGTTTGTTCTAATTTCTAATCTCTCATTTATGTGACATAGGTCGCCTAGGGGCCGCAGATACAGGGAGCAATCCTACTCAAGGTCACCATATGATCCAAGGGGCCGCAGTTACAGCCGAAGCAGGAGCCGTAGCTATAGCCGAAGTTATTCTAGGTAAGTAAAAATACATAATCGAAGTTTTAAAAAGAAGCCAGCCAGCTGATGTTTCTGAAGACCCAGAAACTATGATTTTAATTATGTTTGGAATTTGGATTTCGGAGGCTTTTGTATATGTCTTCTTAGAAAATTCTTGTTTTAGAGATGACTGATTTTTATGCTCTTAGTTGAACAAATTTATGAGCTTTATGGCTGTTTTCTTCATGTAAAATGAAACTTTGGAATTTTAGACTTTTCTCTAAAATACTCCCCAACATTTCTATCAAAGATCATGTCTTAATGTTTGTCTGCTAGTGAGATTAAAACATTGAGACTGTATGCT

mRNA sequence

ACATCCAACAATTTTGCTCTTCCAGCTTGAACGAGGCGCCTCCGTTTGCTTCATCGGTTCTCCGATTCTCAGGAAATCGAAAATGAGAGGTAGAAGTTACAGTTACAGTCCATCACCACCAAGAAGTTATGGCAGGAGATATCGTAGCCCTAGTCCAAGGAGTCGTGGAGGTCGTAGAAGGGACCTGCCAACAAGTCTTTTGGTTAGGAACTTGAGGCACGACTGCAGGCCAGAGGACCTACGTGGATTATTTGGGCGGTTTGGTCCTCTCAAGGACATTTACTTGCCACGAGATTATTATTCTGGAGAACCACGTGGTTTTGGATTCGTTCAGTTCGTTGATGCCGCTGATGCTGCTGATGCCAAGTATGAATTGGATGGCCAAGTTCTCCTGGGTCATGAACTAACTGTTGTGTTTGCTGAGGAGAACAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGCCGCCGGCATTCACCGTTGCGATATTCACGATCACCACACTATGATCGAAAATATTCACGTAGTCCTGAGTATTATTCCCCTGCACGGTCCAGACGATATTCAAGGTCGCCTAGGGGCCGCAGATACAGGGAGCAATCCTACTCAAGGTCACCATATGATCCAAGGGGCCGCAGTTACAGCCGAAGCAGGAGCCGTAGCTATAGCCGAAGTTATTCTAGGTAAGTAAAAATACATAATCGAAGTTTTAAAAAGAAGCCAGCCAGCTGATGTTTCTGAAGACCCAGAAACTATGATTTTAATTATGTTTGGAATTTGGATTTCGGAGGCTTTTGTATATGTCTTCTTAGAAAATTCTTGTTTTAGAGATGACTGATTTTTATGCTCTTAGTTGAACAAATTTATGAGCTTTATGGCTGTTTTCTTCATGTAAAATGAAACTTTGGAATTTTAGACTTTTCTCTAAAATACTCCCCAACATTTCTATCAAAGATCATGTCTTAATGTTTGTCTGCTAGTGAGATTAAAACATTGAGACTGTATGCT

Coding sequence (CDS)

ATGAGAGGTAGAAGTTACAGTTACAGTCCATCACCACCAAGAAGTTATGGCAGGAGATATCGTAGCCCTAGTCCAAGGAGTCGTGGAGGTCGTAGAAGGGACCTGCCAACAAGTCTTTTGGTTAGGAACTTGAGGCACGACTGCAGGCCAGAGGACCTACGTGGATTATTTGGGCGGTTTGGTCCTCTCAAGGACATTTACTTGCCACGAGATTATTATTCTGGAGAACCACGTGGTTTTGGATTCGTTCAGTTCGTTGATGCCGCTGATGCTGCTGATGCCAAGTATGAATTGGATGGCCAAGTTCTCCTGGGTCATGAACTAACTGTTGTGTTTGCTGAGGAGAACAGGAAGAGACCTGAAGAGATGAGAGCAAGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGCCGCCGGCATTCACCGTTGCGATATTCACGATCACCACACTATGATCGAAAATATTCACGTAGTCCTGAGTATTATTCCCCTGCACGGTCCAGACGATATTCAAGGTCGCCTAGGGGCCGCAGATACAGGGAGCAATCCTACTCAAGGTCACCATATGATCCAAGGGGCCGCAGTTACAGCCGAAGCAGGAGCCGTAGCTATAGCCGAAGTTATTCTAGGTAA

Protein sequence

MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRPEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYREQSYSRSPYDPRGRSYSRSRSRSYSRSYSR

Homology

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BLAST of MELO3C009595.1 vs. NCBI nr
Match: XP_008443002.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL33 [Cucumis melo])

HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180
           EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR
Sbjct: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180

Query: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 210

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BLAST of MELO3C009595.1 vs. NCBI nr
Match: XP_011652066.1 (serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus] >KAE8645777.1 hypothetical protein Csa_017367 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPR RGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRGRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180
           EEMRARDSSRGRSYSYS RHSPLRYS+SPHYDRKYSR PEYYSPARSRRYSRSPRG RYR
Sbjct: 121 EEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRYSRSPRGPRYR 180

Query: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           EQSYSRSP DPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 EQSYSRSPSDPRGRSYSRSRSRSYSRSYSR 210

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BLAST of MELO3C009595.1 vs. NCBI nr
Match: XP_011652068.1 (serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPR RGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRGRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180
           EEMRARDSSRGRSYSYS RHSPLRYS+SPHYDRKYSR PEYYSPARSRRYSRSPRG RYR
Sbjct: 121 EEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRYSRSPRGPRYR 180

Query: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           EQSYSRSP DPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 EQSYSRSPSDPRGRSYSRSRSRSYSRSYSR 210

[Close]

BLAST of MELO3C009595.1 vs. NCBI nr
Match: XP_031739396.1 (serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 204/211 (96.68%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPR RGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRGRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQF-VDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120
           GPLKDIYLPRDYYSGEPRGFGFVQF VDAADAADAKYELDGQVLLGHELTVVFAEENRKR
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVVDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120

Query: 121 PEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRY 180
           PEEMRARDSSRGRSYSYS RHSPLRYS+SPHYDRKYSR PEYYSPARSRRYSRSPRG RY
Sbjct: 121 PEEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRYSRSPRGPRY 180

Query: 181 REQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           REQSYSRSP DPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 REQSYSRSPSDPRGRSYSRSRSRSYSRSYSR 211

[Close]

BLAST of MELO3C009595.1 vs. NCBI nr
Match: KAE8651124.1 (hypothetical protein Csa_000954 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104
Identity = 204/211 (96.68%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPR RGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 5   MRGRSYSYSPSPPRSYGRRYRSPSPRGRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 64

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQF-VDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120
           GPLKDIYLPRDYYSGEPRGFGFVQF VDAADAADAKYELDGQVLLGHELTVVFAEENRKR
Sbjct: 65  GPLKDIYLPRDYYSGEPRGFGFVQFVVDAADAADAKYELDGQVLLGHELTVVFAEENRKR 124

Query: 121 PEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRY 180
           PEEMRARDSSRGRSYSYS RHSPLRYS+SPHYDRKYSR PEYYSPARSRRYSRSPRG RY
Sbjct: 125 PEEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRYSRSPRGPRY 184

Query: 181 REQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           REQSYSRSP DPRGRSYSRSRSRSYSRSYSR
Sbjct: 185 REQSYSRSPSDPRGRSYSRSRSRSYSRSYSR 215

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BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 143/222 (64.41%), Postives = 160/222 (72.07%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR-GGRRRDLPTSLLVRNLRHDCRPEDLRGLFGR 60
           MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNLRHDCR EDLR  F +
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQ 60

Query: 61  FGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120
           FGP+KDIYLPRDYY+G+PRGFGFVQF+D ADAADAK+ +DG +LLG ELTVVFAEENRK+
Sbjct: 61  FGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKK 120

Query: 121 PEEMRARDSSRGRSYSYSRRHSPLRYSRS----PHYDRKYSRSPEYYSPARSRRYSR--S 180
           P EMRAR+   GR +   RR  P  YSRS    P   R  SRS +YYSP   R + R  S
Sbjct: 121 PTEMRARERGGGR-FRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSIS 180

Query: 181 PRGRRY-REQSYSRSPYD--PRGRSYS--RSRSRSYSRSYSR 211
           PR  RY   +SYSRSP     RGRS +  R +SRS S S  R
Sbjct: 181 PREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRR 219

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BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.3e-55
Identity = 139/220 (63.18%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR--GGRRRDLPTSLLVRNLRHDCRPEDLRGLFG 60
           MRGR  SY+PSPPR YGRR RSPSPR R  G R  DLPTSLLVRNLRHDCR EDLR  F 
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFE 60

Query: 61  RFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRK 120
           +FGP+KDIYLPRDYY+G+PRGFGF+QF+D ADAA+AK+++DG +LLG ELTVVFAEENRK
Sbjct: 61  QFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRK 120

Query: 121 RPEEMRARDSSRGRSYSYSRRHSPLRYSRSP---HYDRKYSRSPEYYSPARSRRYSR--S 180
           +P EMR RD     +    RR SP RYSRSP      R  SRS  Y SP   R  SR  S
Sbjct: 121 KPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVS 180

Query: 181 PRGRRY-REQSYSRSP--YDPRGRSYSRSRSRSYSRSYSR 211
           P+ RRY +E+SYSRSP     R RS S  R +S+SRS  R
Sbjct: 181 PQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRR 218

[Close]

BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-33
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSP----------RSRGGRRRDLPTSLLVRNLRHDCRP 60
           MR  S  Y   P R YG R RSP P             GGRR     SLLVRN+  DCRP
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60

Query: 61  EDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTV 120
           E+LR  F RFGP++D+Y+PRDYYSG+PRGF FV+FVDA DA +A+  ++ +   G E+TV
Sbjct: 61  EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120

Query: 121 VFAEENRKRPEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRY 180
           V A E+RKRPEEMR +  +R R  S SR  S  R SRS    R  SRSP   S +RS   
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSGSRDRSHGR-SRSRSISR--SRSPRRPSDSRS--- 180

Query: 181 SRSPRGRRYREQSYSRSPY----DPRGRSYSRSRSRSYSRSY 209
                  RYR +SYS +P      PRG        RSYS  Y
Sbjct: 181 -------RYRSRSYSPAPRRRGGPPRGEEDENYSRRSYSPGY 209

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BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 114/239 (47.70%), Postives = 136/239 (56.90%), Query Frame = 0


Query: 2   RGRSYSYSPSPPRSYGRRYRSPSPRSRGG----RRRDLPTS----------LLVRNLRHD 61
           R RS SYSP P      R RSP PR R G    R R+ P+S          LL+RNL  D
Sbjct: 5   RSRSRSYSPRP------RDRSP-PRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLD 64

Query: 62  CRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHE 121
            RP DLR  F RFGPLKDIYLPR+YY+GEPRGFGFV++  A DAA+A   ++ +V+ G E
Sbjct: 65  ARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGRE 124

Query: 122 LTVVFAEENRKRPEEMRARDSSRGRSYSYSR--RHSPLRYSRS-------PHYDRKYS-- 181
           + +VFAEENRK P+EMR  + + GR   Y R    SP R  RS       P  + ++S  
Sbjct: 125 IAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKV 184

Query: 182 RSPEYYSP-ARSRRYSRSPRGRRYRE--QSYSRSPYDP------RGRSYSRSRSRSYSR 207
           R  + YSP  RSR  SRSP  R  RE      RSP +       R R  SRSRSRS SR
Sbjct: 185 REDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTPIRSRCLSRSRSRSLSR 236

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BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot
Match: O75494 (Serine/arginine-rich splicing factor 10 OS=Homo sapiens OX=9606 GN=SRSF10 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 78/182 (42.86%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 37  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKY 96
           TSL VRN+  D R EDLR  FGR+GP+ D+Y+P D+Y+  PRGF +VQF D  DA DA +
Sbjct: 10  TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69

Query: 97  ELDGQVLLGHELTVVFAEENRKRPEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYS 156
            LD + + G ++ + FA+ +RK P +M+A++     S S    +   R SRS  Y+R+ S
Sbjct: 70  NLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRS 129

Query: 157 RSPEY-------YSPARSRRYSRSPRGRRYREQSYS-RSPYDPRGRSYSRSRSRSYSRSY 211
           RS  +       YSP  SR     P GR  R +S+S    +  R RS+SRS+S S SRS 
Sbjct: 130 RSRSFDYNYRRSYSPRNSR-----PTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRSK 186

[Close]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL
Match: A0A1S3B7U0 (serine/arginine-rich SC35-like splicing factor SCL33 OS=Cucumis melo OX=3656 GN=LOC103486733 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180
           EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR
Sbjct: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180

Query: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 210

[Close]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL
Match: A0A0A0LGW4 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G792060 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRRYRSPSPR RGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRGRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSRSPRGRRYR 180
           EEMRARDSSRGRSYSYS RHSPLRYS+SPHYDRKYSR PEYYSPARSRRYSRSPRG RYR
Sbjct: 121 EEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRYSRSPRGPRYR 180

Query: 181 EQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           EQSYSRSP DPRGRSYSRSRSRSYSRSYSR
Sbjct: 181 EQSYSRSPSDPRGRSYSRSRSRSYSRSYSR 210

[Close]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL
Match: A0A6J1DCY5 (serine/arginine-rich SC35-like splicing factor SCL33 OS=Momordica charantia OX=3673 GN=LOC111019338 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 193/212 (91.04%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRR+RSPSPR RGGR RDLPTSLLVRNLRHDCRPEDLRGLFGRF
Sbjct: 1   MRGRSYSYSPSPPRSYGRRHRSPSPRDRGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSGEPRGFGFVQFVD ADA DAKYELDGQVLLG ELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDPADATDAKYELDGQVLLGRELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSR--SPRGRR 180
           EEMRARDSSRGRSY+Y  R SPLRYSRSPHYDRKYSRSPEYYSPA+S RYSR  SPR RR
Sbjct: 121 EEMRARDSSRGRSYNY--RRSPLRYSRSPHYDRKYSRSPEYYSPAQSGRYSRSISPRDRR 180

Query: 181 YREQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           YRE+SY RSPYD RGRSYSRSRSRSYSRSY R
Sbjct: 181 YRERSYLRSPYDSRGRSYSRSRSRSYSRSYCR 210

[Close]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL
Match: A0A6J1KYI3 (serine/arginine-rich SC35-like splicing factor SCL33 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111498719 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.1e-88
Identity = 180/212 (84.91%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRR RS SPR  GGR RDLPTSLLVRNLRHDCRPEDLRGLFG+F
Sbjct: 1   MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGQF 60

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSG+PRGFGFVQ++D ADAADAKYELDGQVLLG ELTVVFAEENRKRP
Sbjct: 61  GPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDGQVLLGRELTVVFAEENRKRP 120

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSR--SPRGRR 180
           E+MRARDSSRGRSYSY  R SPL+YS+SP + RKYSRSPEYYSPARSRRYSR  SPR + 
Sbjct: 121 EQMRARDSSRGRSYSY--RRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRSISPRDQM 180

Query: 181 YREQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           +RE+SYSRSPY+ R R YSRSRSRS SRSYSR
Sbjct: 181 HRERSYSRSPYNSRDRGYSRSRSRSRSRSYSR 210

[Close]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL
Match: A0A6J1L0E4 (serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498719 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.1e-88
Identity = 180/212 (84.91%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSRGGRRRDLPTSLLVRNLRHDCRPEDLRGLFGRF 60
           MRGRSYSYSPSPPRSYGRR RS SPR  GGR RDLPTSLLVRNLRHDCRPEDLRGLFG+F
Sbjct: 5   MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGQF 64

Query: 61  GPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKRP 120
           GPLKDIYLPRDYYSG+PRGFGFVQ++D ADAADAKYELDGQVLLG ELTVVFAEENRKRP
Sbjct: 65  GPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDGQVLLGRELTVVFAEENRKRP 124

Query: 121 EEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRYSR--SPRGRR 180
           E+MRARDSSRGRSYSY  R SPL+YS+SP + RKYSRSPEYYSPARSRRYSR  SPR + 
Sbjct: 125 EQMRARDSSRGRSYSY--RRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRSISPRDQM 184

Query: 181 YREQSYSRSPYDPRGRSYSRSRSRSYSRSYSR 211
           +RE+SYSRSPY+ R R YSRSRSRS SRSYSR
Sbjct: 185 HRERSYSRSPYNSRDRGYSRSRSRSRSRSYSR 214

[Close]

BLAST of MELO3C009595.1 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57
Identity = 139/217 (64.06%), Postives = 155/217 (71.43%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR-GGRRRDLPTSLLVRNLRHDCRPEDLRGLFGR 60
           MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNLRHDCR EDLR  F +
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQ 60

Query: 61  FGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120
           FGP+KDIYLPRDYY+G+PRGFGFVQF+D ADAADAK+ +DG +LLG ELTVVFAEENRK+
Sbjct: 61  FGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKK 120

Query: 121 PEEMRARDSSRGRSYSYSRRHSPLRYSRS----PHYDRKYSRSPEYYSPARSRRYSR--S 180
           P EMRAR+   GR +   RR  P  YSRS    P   R  SRS +YYSP   R + R  S
Sbjct: 121 PTEMRARERGGGR-FRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSIS 180

Query: 181 PRGRRY-REQSYSRSPYDPRGRSYSRSRSRSYSRSYS 210
           PR  RY   +SYSRSP     R  S +  R  SRS S
Sbjct: 181 PREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLS 214

[Close]

BLAST of MELO3C009595.1 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 143/222 (64.41%), Postives = 160/222 (72.07%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR-GGRRRDLPTSLLVRNLRHDCRPEDLRGLFGR 60
           MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNLRHDCR EDLR  F +
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQ 60

Query: 61  FGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRKR 120
           FGP+KDIYLPRDYY+G+PRGFGFVQF+D ADAADAK+ +DG +LLG ELTVVFAEENRK+
Sbjct: 61  FGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKK 120

Query: 121 PEEMRARDSSRGRSYSYSRRHSPLRYSRS----PHYDRKYSRSPEYYSPARSRRYSR--S 180
           P EMRAR+   GR +   RR  P  YSRS    P   R  SRS +YYSP   R + R  S
Sbjct: 121 PTEMRARERGGGR-FRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSIS 180

Query: 181 PRGRRY-REQSYSRSPYD--PRGRSYS--RSRSRSYSRSYSR 211
           PR  RY   +SYSRSP     RGRS +  R +SRS S S  R
Sbjct: 181 PREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRR 219

[Close]

BLAST of MELO3C009595.1 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 217.6 bits (553), Expect = 9.4e-57
Identity = 139/220 (63.18%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR--GGRRRDLPTSLLVRNLRHDCRPEDLRGLFG 60
           MRGR  SY+PSPPR YGRR RSPSPR R  G R  DLPTSLLVRNLRHDCR EDLR  F 
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFE 60

Query: 61  RFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTVVFAEENRK 120
           +FGP+KDIYLPRDYY+G+PRGFGF+QF+D ADAA+AK+++DG +LLG ELTVVFAEENRK
Sbjct: 61  QFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRK 120

Query: 121 RPEEMRARDSSRGRSYSYSRRHSPLRYSRSP---HYDRKYSRSPEYYSPARSRRYSR--S 180
           +P EMR RD     +    RR SP RYSRSP      R  SRS  Y SP   R  SR  S
Sbjct: 121 KPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVS 180

Query: 181 PRGRRY-REQSYSRSP--YDPRGRSYSRSRSRSYSRSYSR 211
           P+ RRY +E+SYSRSP     R RS S  R +S+SRS  R
Sbjct: 181 PQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRR 218

[Close]

BLAST of MELO3C009595.1 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55
Identity = 142/234 (60.68%), Postives = 159/234 (67.95%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSPRSR-GGRRRDLPTSLLVRNLRHDCRPEDLRGLFGR 60
           MRGR  SY+PSPPR YGRR RSPSPR R GGR RDLPTSLLVRNLRHDCR EDLR  F +
Sbjct: 1   MRGR--SYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQ 60

Query: 61  FGPLKDIYLPRDYYSG------------EPRGFGFVQFVDAADAADAKYELDGQVLLGHE 120
           FGP+KDIYLPRDYY+G            +PRGFGFVQF+D ADAADAK+ +DG +LLG E
Sbjct: 61  FGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLLLGRE 120

Query: 121 LTVVFAEENRKRPEEMRARDSSRGRSYSYSRRHSPLRYSRS----PHYDRKYSRSPEYYS 180
           LTVVFAEENRK+P EMRAR+   G  +   RR  P  YSRS    P   R  SRS +YYS
Sbjct: 121 LTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYS 180

Query: 181 PARSRRYSR--SPRGRRY-REQSYSRSPYD--PRGRSYS--RSRSRSYSRSYSR 211
           P   R + R  SPR  RY   +SYSRSP     RGRS +  R +SRS S S  R
Sbjct: 181 PPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRR 232

[Close]

BLAST of MELO3C009595.1 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 142.1 bits (357), Expect = 5.0e-34
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 0


Query: 1   MRGRSYSYSPSPPRSYGRRYRSPSP----------RSRGGRRRDLPTSLLVRNLRHDCRP 60
           MR  S  Y   P R YG R RSP P             GGRR     SLLVRN+  DCRP
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60

Query: 61  EDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTV 120
           E+LR  F RFGP++D+Y+PRDYYSG+PRGF FV+FVDA DA +A+  ++ +   G E+TV
Sbjct: 61  EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120

Query: 121 VFAEENRKRPEEMRARDSSRGRSYSYSRRHSPLRYSRSPHYDRKYSRSPEYYSPARSRRY 180
           V A E+RKRPEEMR +  +R R  S SR  S  R SRS    R  SRSP   S +RS   
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSGSRDRSHGR-SRSRSISR--SRSPRRPSDSRS--- 180

Query: 181 SRSPRGRRYREQSYSRSPY----DPRGRSYSRSRSRSYSRSY 209
                  RYR +SYS +P      PRG        RSYS  Y
Sbjct: 181 -------RYRSRSYSPAPRRRGGPPRGEEDENYSRRSYSPGY 209

The following BLAST results are available for this feature:

BLAST of MELO3C009595.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443002.1	5.2e-110	100.00	PREDICTED: serine/arginine-rich SC35-like splicing factor SCL33 [Cucumis melo]	[more]
XP_011652066.1	4.6e-106	97.14	serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus...	[more]
XP_011652068.1	4.6e-106	97.14	serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 [Cucumis sativus...	[more]
XP_031739396.1	1.1e-104	96.68	serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucumis sativus...	[more]
KAE8651124.1	1.1e-104	96.68	hypothetical protein Csa_000954 [Cucumis sativus]	[more]

BLAST of MELO3C009595.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU4	2.0e-56	64.41	Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=...	[more]
Q9LHP2	1.3e-55	63.18	Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX...	[more]
Q8L3X8	7.0e-33	47.30	Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=...	[more]
Q1PDV2	1.3e-31	47.70	Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=...	[more]
O75494	4.1e-25	42.86	Serine/arginine-rich splicing factor 10 OS=Homo sapiens OX=9606 GN=SRSF10 PE=1 S...	[more]

BLAST of MELO3C009595.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7U0	2.5e-110	100.00	serine/arginine-rich SC35-like splicing factor SCL33 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LGW4	2.2e-106	97.14	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G792060 PE=4 SV...	[more]
A0A6J1DCY5	1.2e-96	91.04	serine/arginine-rich SC35-like splicing factor SCL33 OS=Momordica charantia OX=3...	[more]
A0A6J1KYI3	6.1e-88	84.91	serine/arginine-rich SC35-like splicing factor SCL33 isoform X3 OS=Cucurbita max...	[more]
A0A6J1L0E4	6.1e-88	84.91	serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 OS=Cucurbita max...	[more]

BLAST of MELO3C009595.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55310.2	1.1e-57	64.06	SC35-like splicing factor 33	[more]
AT1G55310.1	1.4e-57	64.41	SC35-like splicing factor 33	[more]
AT3G13570.1	9.4e-57	63.18	SC35-like splicing factor 30A	[more]
AT1G55310.3	1.8e-55	60.68	SC35-like splicing factor 33	[more]
AT3G55460.1	5.0e-34	47.30	SC35-like splicing factor 30	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 38..111 e-value: 8.2E-22 score: 88.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 39..108 e-value: 6.0E-19 score: 67.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 37..115 score: 17.284681
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 18..148 e-value: 1.2E-26 score: 95.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 1..208
None	No IPR available	PANTHER	PTHR23147:SF155	SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A	coord: 1..208
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 37..141

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009595	MELO3C009595	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009595.1:exon:124732	MELO3C009595.1:exon:124732	exon
MELO3C009595.1:exon:124731	MELO3C009595.1:exon:124731	exon
MELO3C009595.1:exon:124730	MELO3C009595.1:exon:124730	exon
MELO3C009595.1:exon:124729	MELO3C009595.1:exon:124729	exon
MELO3C009595.1:exon:124728	MELO3C009595.1:exon:124728	exon
MELO3C009595.1:exon:124727	MELO3C009595.1:exon:124727	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009595.1:three_prime_utr	MELO3C009595.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009595.1:cds	MELO3C009595.1:cds	CDS
MELO3C009595.1:cds	MELO3C009595.1:cds_2	CDS
MELO3C009595.1:cds	MELO3C009595.1:cds_3	CDS
MELO3C009595.1:cds	MELO3C009595.1:cds_4	CDS
MELO3C009595.1:cds	MELO3C009595.1:cds_5	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009595.1:five_prime_utr	MELO3C009595.1:five_prime_utr	five_prime_UTR
MELO3C009595.1:five_prime_utr	MELO3C009595.1:five_prime_utr_2	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009595.1	MELO3C009595.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding