MELO3C009553.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C009553.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CSL zinc finger domain-containing protein
Location	chr04: 30065682 .. 30068376 (+)
Sequence length	1002
RNA-Seq Expression	MELO3C009553.1
Synteny	MELO3C009553.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTTTACCATCTCCGTTGACAACTTCGGTGCCGGTTTTTCTTCTTCGGCAGAAGGTTCCATTTCGACCATGGCGATTTCCTATCCCTCACCGGCGTCTGCCGTGCTGATTCTGTTGGTTACAGCGGTGCTCGTCGAAGCTGGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAACTTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGCAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTCGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGGTTAGTTCTTCAAACATCTGCGTTCTTTTTTGTTGTTGAATTTTTGGATTTTCTGTTTGCTCTTCGTTTGCAGATGAAACTAGTTTTAGTTAGAATTTGTGCGACTATTTGTCTAAGGCAACGATCAATTTGTTTTGTGGGATTGGAGTGATAGGTTTTTGTTAACTCTCCTACTAGGGTTTAGGATGCAAACAGAGCAGATCCTTATGAAATCACTTCGTTTACTTTGATTGCCCGATGCTAGCTCGATTTGATTTGGGATTTTCCGTGTGTTATTTGTTCATTGAGGGAATTTAGTAATCAATCTCCTTTGGTTGATAGTCTGCACGATTCAATTTTATTAAGAAACTCAAATCTCGAACTTTAGTAGAGAAAAAAGAAGGAACTTAGTTGGTGTTTGAGAGAGTTGAACCATATTAGAAGGAAGAAATTTATAGCTCTGCTAGTTTGATTTCTATTCCTCACATAAATATGAATTTCTTTCTTTTAGTTTATCTACGTTAACATGCTAGTTTTGGGTTCTTATTACAAGTTAGGATAGGGGAATTTGAACCTGGATCCTCTTGTTTGTCAGGACATACAAGTGCCGATTGAGCTAACTTCTTGATGACGATTTAGGTTCTTATTACCAACCATGGACTCATGATTCTTTTTTTCTTTTCGTTCATTACCAGTCTTCAAATGGCTATATGGTTGCATTTGCTGGCCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTAAGTTTATCTGTTTATCGTATAGAAAGTATGTAATGACGAGTTGTTCTAGCAGTAAACAGGGAGCATGATCTAATAAAAACCTAGGAGGTCATGAGTTTGATCCATGGTGGTTCTTAGGATTTAATATTCTATGAGTTTTCCTTTCTAAATGCTGTAGGGGTAGACCAGTTATCTCGTGAGATTAGTCCAAAATTCGTATAAGCTGCTCGGACACTCACGAATATAATATTATATATAAAGACATAGAACGGAGGAACTTAACCTAAAGACAAGAAAATAACACAATACTACACTAACTTGGTGGTATGTTTATTAAGAATTCAATGGATATATGGCAGGGTCACATTGTAACTAATTAACTTTTATGTGAAATTTGAGAGATAGCTGTGTAAAAGTTATTGAATATCGTTGCCCTAATATGGTAGTCTCCAATATTTTCATTGTTAATCTCTCGTTTATCCAACAATGTAAAACTAATCGTGACATTATGGCAGCATCCTTGGGTGAGAAGTGGGAGGGGTTATTGTTGGATATGTGAATGGGTAGGCTTGATAAAACATGATATGTTCAACATTTTCAAAACAGGATTTTAATTGTTTAGGGTCTCTCCATAGGCAATCCGAAAACAAAAGATTCGATGAAAACAAGGTTGTATGTATGTTTTAGATGTGTGTTTGATAGCATATTTAGAAATTACGTTTTAAGTTGAATAATTGTTCAGAATGTGTTTCATAAGCTATTTATAAACCATAAAACTACTTTACAATATTAGGTCGAGTATAAAATGTTAATTATTAAAATTTGTGACATGTTTTATTTTAAAATTTTCTATAATTATTATTTTGTAGTATCTCGTAATTTATAATACTTTGTTTTTTAATTTCCAAAAATATAATTTAGATTGCCTACCAAACACTTCTTCAACAAATCTAAAAACGTAAAAACATAATCTAGACTAACTATCAAACAGCTCATCCAAGATTGATAACAAATCCATTGAATTTTCTTGTGGATAGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGACGGTTGCGCTCAATGTTCAAACAACAATACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAACAATGGTGGTTCTGTCGATTGTAGTCTCGCAATTCAGTTAGCATTCTCCGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAATAGACCATATTTCTGTTGATGTATATTGTCATGATTTCCATCATTGTATGCTATAATTCAGTTTGTGCAACAAATTCGTTTGAAATCTTCTTCATTTCTCATTAATTAAATGTGTTAACAATAGGTTTGGGACGACTAGTGTTGTATGTATTTTGTATACAAATATCACAGTGTTGAATTTCTTCTCTTTCCCC

mRNA sequence

ACTCTTTACCATCTCCGTTGACAACTTCGGTGCCGGTTTTTCTTCTTCGGCAGAAGGTTCCATTTCGACCATGGCGATTTCCTATCCCTCACCGGCGTCTGCCGTGCTGATTCTGTTGGTTACAGCGGTGCTCGTCGAAGCTGGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAACTTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGCAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTCGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGCCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGACGGTTGCGCTCAATGTTCAAACAACAATACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAACAATGGTGGTTCTGTCGATTGTAGTCTCGCAATTCAGTTAGCATTCTCCGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAATAGACCATATTTCTGTTGATGTATATTGTCATGATTTCCATCATTGTATGCTATAATTCAGTTTGTGCAACAAATTCGTTTGAAATCTTCTTCATTTCTCATTAATTAAATGTGTTAACAATAGGTTTGGGACGACTAGTGTTGTATGTATTTTGTATACAAATATCACAGTGTTGAATTTCTTCTCTTTCCCC

Coding sequence (CDS)

ATGGCGATTTCCTATCCCTCACCGGCGTCTGCCGTGCTGATTCTGTTGGTTACAGCGGTGCTCGTCGAAGCTGGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAACTTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGCAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTCGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCGTCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGCCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTCGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGACGGTTGCGCTCAATGTTCAAACAACAATACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAACAATGGTGGTTCTGTCGATTGTAGTCTCGCAATTCAGTTAGCATTCTCCGGCACAGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAAGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAA

Protein sequence

MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFNKTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF

Homology

[Close]

BLAST of MELO3C009553.1 vs. NCBI nr
Match: XP_008442938.1 (PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo] >KAA0043800.1 uncharacterized protein E6C27_scaffold236G001320 [Cucumis melo var. makuwa] >TYK25333.1 uncharacterized protein E5676_scaffold352G004720 [Cucumis melo var. makuwa])

HSP 1 Score: 489.2 bits (1258), Expect = 2.1e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. NCBI nr
Match: XP_004136522.1 (uncharacterized protein LOC101209667 [Cucumis sativus] >KGN59226.1 hypothetical protein Csa_001956 [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 235/245 (95.92%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAISY SPAS VLILLVTAV++EA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. NCBI nr
Match: XP_038903347.1 (uncharacterized protein LOC120089965 [Benincasa hispida])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 226/245 (92.24%), Postives = 234/245 (95.51%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAIS   PAS VL+L VTAV+VEAGDNNRVFS CTDTTVE SDGFTLGFAFAT+QKF FN
Sbjct: 1   MAISDLLPASVVLLLFVTAVVVEAGDNNRVFSTCTDTTVEKSDGFTLGFAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNNNTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHTVTSFTLVLEFEKGRLQNLFWKRDGCAKCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLFNLYSNLK SLTSQ
Sbjct: 181 RTNNCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKGSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. NCBI nr
Match: XP_022939140.1 (uncharacterized protein LOC111445105 [Cucurbita moschata])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 214/245 (87.35%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAI   S ASAVL+LL+TA  VEA D+NRVFSPC DTTVE SDGFTLG AFATQQKF FN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLIS+FRP VDEISLLTVNT+ SVS+F+PSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. NCBI nr
Match: XP_023538924.1 (uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 214/245 (87.35%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAI   S ASAVL+LL+TA  VEA D+NRVFSPC DTTVE SDGFTLG AFAT QKF FN
Sbjct: 1   MAIYDLSRASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATHQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLISVFRP VDEISLLTVNT+ SVS+F+PSSNGYMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVNTTPSVSNFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL
Match: A0A5A7TKL4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004720 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL
Match: A0A1S3B6Y8 (uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL
Match: A0A0A0LGU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.5e-130
Identity = 235/245 (95.92%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAISY SPAS VLILLVTAV++EA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL
Match: A0A6J1FLU2 (uncharacterized protein LOC111445105 OS=Cucurbita moschata OX=3662 GN=LOC111445105 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.8e-115
Identity = 214/245 (87.35%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAI   S ASAVL+LL+TA  VEA D+NRVFSPC DTTVE SDGFTLG AFATQQKF FN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL LSPCDSRL LTNGNSLIS+FRP VDEISLLTVNT+ SVS+F+PSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFVAD+QH VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RT++CK  GG VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL
Match: A0A6J1F5Z3 (uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC111442414 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.5e-114
Identity = 215/245 (87.76%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60
           MAIS  SP S VL+LLVTAV+VEA DNNRVFSPC DTTVE SDGFTLG AFAT+QKF FN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLTVNT+ SVSSF+PSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 244

[Close]

BLAST of MELO3C009553.1 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 307.8 bits (787), Expect = 8.0e-84
Identity = 148/233 (63.52%), Postives = 184/233 (78.97%), Query Frame = 0


Query: 16  LVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFF---NKTLQLSPCDSRL 75
           ++T+ L EAGDNN+V+SPC+D+TV   DGFT G AFA +  FF    +K++Q SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  GLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVAD 135
              NGNS ++VFRPKVDEI+LLT+NTS S S    +S GYMVAFAG KYAARS PI VAD
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVAD 133

Query: 136 QQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAIRTNSCKNNGGSV 195
             HIVTSFTLVLEF+KGRL+N+FWK+DGC++CS ++ FVC++ ++CAI+  +CKN GG V
Sbjct: 134 SNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQV 193

Query: 196 DCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           DCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL+ LYSNLKDSLT+ +  IF
Sbjct: 194 DCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

[Close]

BLAST of MELO3C009553.1 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 145/222 (65.32%), Postives = 175/222 (78.83%), Query Frame = 0


Query: 24  AGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFNKTLQLSPCDSRLGLTNGNSLISV 83
           +G+ N ++SPC+DT ++ SDGFT G AF+++  FF N+T+ LSPCD RL L   NS  SV
Sbjct: 28  SGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSV 87

Query: 84  FRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVADQQHIVTSFTLV 143
           FRPK+DEISLL++NTS   + F  +  GYMVAFAGRKYAARS P F+A+   IVTSFTLV
Sbjct: 88  FRPKIDEISLLSINTS---AFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLV 147

Query: 144 LEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAIRTNSCKNNGGSVDCSLAIQLAFS 203
           +EF+KGRLQNL+WKRDGCA C  N  FVC++ QDCAIRT SCK  GG+VDCSL IQLAFS
Sbjct: 148 MEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFS 207

Query: 204 GTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           GTDKHL+V NSWYEV  L+QYSL+ LYSNLK SLT+Q+N  F
Sbjct: 208 GTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246

[Close]

BLAST of MELO3C009553.1 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-61
Identity = 120/239 (50.21%), Postives = 172/239 (71.97%), Query Frame = 0


Query: 12  VLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFNKTLQLSPCDSR 71
           ++I+++    V A DNN V+SPC+DT +   DGFT+G A ++++ FF ++ +QLSPCD+R
Sbjct: 130 MMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ-VQLSPCDTR 189

Query: 72  LGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPS-SNGYMVAFAGRKYAARSPPIFV 131
           LGL    + +++FRPKVDEISLL+++TS+    F+PS + G+MV FAG KYAARS P+ V
Sbjct: 190 LGLAAKMAQLALFRPKVDEISLLSIDTSK----FNPSEAGGFMVGFAGSKYAARSYPVKV 249

Query: 132 ADQQHIVTSFT---------LVLEFEKGRLQNLFWKRDGCAQC--SNNNTFVCIHNQDCA 191
           AD  + +T+FT         LVLEF+KG LQNLFWK  GC  C  + +++ VC++  DCA
Sbjct: 250 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 309

Query: 192 IRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLT 239
           + T+ CK NGG  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL +LY+N  DSL+
Sbjct: 310 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]

BLAST of MELO3C009553.1 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 112 YMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQ 164
           Y V   G +  +   P F+A+   IVTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of MELO3C009553.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442938.1	2.1e-134	100.00	PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo] >KAA0043800.1 unc...	[more]
XP_004136522.1	1.5e-129	95.92	uncharacterized protein LOC101209667 [Cucumis sativus] >KGN59226.1 hypothetical ...	[more]
XP_038903347.1	2.8e-123	92.24	uncharacterized protein LOC120089965 [Benincasa hispida]	[more]
XP_022939140.1	1.4e-114	87.35	uncharacterized protein LOC111445105 [Cucurbita moschata]	[more]
XP_023538924.1	1.4e-114	87.35	uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C009553.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009553.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKL4	1.0e-134	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6Y8	1.0e-134	100.00	uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=...	[more]
A0A0A0LGU1	7.5e-130	95.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1	[more]
A0A6J1FLU2	6.8e-115	87.35	uncharacterized protein LOC111445105 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1F5Z3	1.5e-114	87.76	uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]

BLAST of MELO3C009553.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11800.1	8.0e-84	63.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44150.1	3.1e-83	65.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	2.5e-61	50.21	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	4.5e-10	53.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 2..245
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 2..245

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009553	MELO3C009553	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009553.1:exon:124948	MELO3C009553.1:exon:124948	exon
MELO3C009553.1:exon:124949	MELO3C009553.1:exon:124949	exon
MELO3C009553.1:exon:124950	MELO3C009553.1:exon:124950	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009553.1:five_prime_utr	MELO3C009553.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009553.1:cds	MELO3C009553.1:cds	CDS
MELO3C009553.1:cds	MELO3C009553.1:cds_2	CDS
MELO3C009553.1:cds	MELO3C009553.1:cds_3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009553.1:three_prime_utr	MELO3C009553.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009553.1	MELO3C009553.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
molecular_function	GO:0046872	metal ion binding