MELO3C009357.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C009357.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ABC transporter B family member 1-like
Location	chr04: 31439048 .. 31439721 (+)
Sequence length	525
RNA-Seq Expression	MELO3C009357.1
Synteny	MELO3C009357.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCATTCGCTAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGTATAATTGACCATAAGCCTACTCTAAACCGCAACAACAAATCTGGTTTGGAATTAGAATCAGTTTCGGGACTGATTGAGCTGAAGAATGTTGATTTCGCATACCCATCAAGGCCAGATGTAAGAATCCTCAACAATTTCTCCCTAACTGTCCCTGCTGGAAAAACTATAGCTCTGGTTGGAAGCAGCGGCTCCGGCAAGAGCACGGTTGTTGCCCTAATTGAAAGATTCTATGACCCCAATTCAGGTAAATCCCCTGATCTGTGTCGACTTTTAAGTAATTAAAACATTGCTTTTGGTTTTGGTTTTCACTTTTCAGTCTTATTCTTGAAATTTAAGTTTATGGACTTGGTTTCTGAGTTTACAAGAAAAGTTTCTTCTTGACTGAATGTGCAGGAGAAGTTCTACTAGACGGACGTGACATAAAAACTTTGAAGCTGAGATGGTTAAGACAGCAGATAGGATTGGTGAGCCAAGAACCTGCTCTTTTTGCTACCACCATCAAGGAGAATATTCTCTTAGGCAGACCTGAAGCAGACCAACTTGAGGTAGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACTCAGGTTAGATAA

mRNA sequence

ATGAGTTCATTCGCTAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGTATAATTGACCATAAGCCTACTCTAAACCGCAACAACAAATCTGGTTTGGAATTAGAATCAGTTTCGGGACTGATTGAGCTGAAGAATGTTGATTTCGCATACCCATCAAGGCCAGATGTAAGAATCCTCAACAATTTCTCCCTAACTGTCCCTGCTGGAAAAACTATAGCTCTGGTTGGAAGCAGCGGCTCCGGCAAGAGCACGGTTGTTGCCCTAATTGAAAGATTCTATGACCCCAATTCAGGAGAAGTTCTACTAGACGGACGTGACATAAAAACTTTGAAGCTGAGATGGTTAAGACAGCAGATAGGATTGGTGAGCCAAGAACCTGCTCTTTTTGCTACCACCATCAAGGAGAATATTCTCTTAGGCAGACCTGAAGCAGACCAACTTGAGGTAGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACTCAGGTTAGATAA

Coding sequence (CDS)

ATGAGTTCATTCGCTAAGGCTAAAGTTGCAGCTGCCAAAATCTACCGTATAATTGACCATAAGCCTACTCTAAACCGCAACAACAAATCTGGTTTGGAATTAGAATCAGTTTCGGGACTGATTGAGCTGAAGAATGTTGATTTCGCATACCCATCAAGGCCAGATGTAAGAATCCTCAACAATTTCTCCCTAACTGTCCCTGCTGGAAAAACTATAGCTCTGGTTGGAAGCAGCGGCTCCGGCAAGAGCACGGTTGTTGCCCTAATTGAAAGATTCTATGACCCCAATTCAGGAGAAGTTCTACTAGACGGACGTGACATAAAAACTTTGAAGCTGAGATGGTTAAGACAGCAGATAGGATTGGTGAGCCAAGAACCTGCTCTTTTTGCTACCACCATCAAGGAGAATATTCTCTTAGGCAGACCTGAAGCAGACCAACTTGAGGTAGAGGAAGCTGCTCGAGTCGCCAATGCTCATTCATTCATTATCAAACTTCCTGAAGGCTATGACACTCAGGTTAGATAA

Protein sequence

MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQVR

Homology

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BLAST of MELO3C009357.1 vs. NCBI nr
Match: KAA0043994.1 (ABC transporter B family member 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 337.8 bits (865), Expect = 5.5e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN
Sbjct: 395 MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 454

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 455 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 514

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 515 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 567

[Close]

BLAST of MELO3C009357.1 vs. NCBI nr
Match: TYK25146.1 (ABC transporter B family member 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.7 bits (857), Expect = 4.7e-88
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGLIELKNVDFAYPSRPDVRILN
Sbjct: 406 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLIELKNVDFAYPSRPDVRILN 465

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDI+TLKLRWLRQQIG
Sbjct: 466 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIETLKLRWLRQQIG 525

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 526 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 578

[Close]

BLAST of MELO3C009357.1 vs. NCBI nr
Match: KAA0043993.1 (ABC transporter B family member 1 [Cucumis melo var. makuwa] >TYK25147.1 ABC transporter B family member 1 [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDFAYPSRPDVRILN
Sbjct: 396 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFAYPSRPDVRILN 455

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 456 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 515

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 516 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 568

[Close]

BLAST of MELO3C009357.1 vs. NCBI nr
Match: XP_031737655.1 (LOW QUALITY PROTEIN: ABC transporter B family member 1 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87
Identity = 169/173 (97.69%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDFAYPSRPDVRILN
Sbjct: 399 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFAYPSRPDVRILN 458

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVV+LIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 459 NFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 518

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 519 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 571

[Close]

BLAST of MELO3C009357.1 vs. NCBI nr
Match: KAE8651042.1 (hypothetical protein Csa_002573 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.2e-87
Identity = 169/173 (97.69%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDFAYPSRPDVRILN
Sbjct: 399 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFAYPSRPDVRILN 458

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVV+LIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 459 NFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 518

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 519 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 571

[Close]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot
Match: Q9ZR72 (ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-82
Identity = 148/173 (85.55%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           M++FAKAKVAAAKI+RIIDHKPT+ RN++SG+EL+SV+GL+ELKNVDF+YPSRPDV+ILN
Sbjct: 328 MAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVKILN 387

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NF L+VPAGKTIALVGSSGSGKSTVV+LIERFYDPNSG+VLLDG+D+KTLKLRWLRQQIG
Sbjct: 388 NFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIG 447

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFAT+IKENILLGRP+ADQ+E+EEAARVANAHSFIIKLP+G+DTQV
Sbjct: 448 LVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQV 500

[Close]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot
Match: Q9LJX0 (ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-56
Identity = 108/173 (62.43%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           + +F+K K A  K+  II+ +PT+ ++   G  L+ V G IE K+V F+YPSRPDV I  
Sbjct: 325 LGAFSKGKAAGYKLMEIINQRPTIIQDPLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFR 384

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NF++  P+GKT+A+VG SGSGKSTVV+LIERFYDPNSG++LLDG +IKTL+L++LR+QIG
Sbjct: 385 NFNIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIG 444

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LV+QEPALFATTI ENIL G+P+A  +EVE AA  ANAHSFI  LP+GYDTQV
Sbjct: 445 LVNQEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQV 497

[Close]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot
Match: Q6YUU5 (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.1e-53
Identity = 100/170 (58.82%), Postives = 135/170 (79.41%), Query Frame = 0


Query: 4   FAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFS 63
           F++A  AA +I  +I   P ++  + +G EL +V+G +E +NV+F YPSRP+  I  +F+
Sbjct: 322 FSEASSAAERILEVIRRVPKIDSESDTGEELANVTGEVEFRNVEFCYPSRPESPIFVSFN 381

Query: 64  LTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVS 123
           L VPAG+T+ALVG SGSGKSTV+AL+ERFYDP++GEV++DG DI+ L+L+WLR Q+GLVS
Sbjct: 382 LRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMVDGVDIRRLRLKWLRAQMGLVS 441

Query: 124 QEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           QEPALFAT+I+ENIL G+ EA   EV  AA+ ANAH+FI +LP+GYDTQV
Sbjct: 442 QEPALFATSIRENILFGKEEATAEEVVAAAKAANAHNFISQLPQGYDTQV 491

[Close]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot
Match: Q8LPT1 (ABC transporter B family member 6 OS=Arabidopsis thaliana OX=3702 GN=ABCB6 PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-51
Identity = 93/168 (55.36%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 6    KAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLT 65
            K + + A ++ IID  PT+  ++ S L   +V G IELKN+DF YP+RP+V +L+NFSL 
Sbjct: 1123 KRRRSLASVFEIIDRVPTIEPDDTSALSPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLK 1182

Query: 66   VPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQE 125
            V  G+T+A+VG SGSGKST+++LIER+YDP +G+VLLDGRD+K+  LRWLR  +GL+ QE
Sbjct: 1183 VNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQE 1242

Query: 126  PALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
            P +F+TTI+ENI+  R  A + E++EAAR+ANAH FI  LP GYDT +
Sbjct: 1243 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHI 1290

[Close]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot
Match: Q9M3B9 (ABC transporter B family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCB20 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 6    KAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLT 65
            K + +   ++ I+D  PT+  ++ S L+  +V G IELKNVDF YP+RP++ +L+NFSL 
Sbjct: 1124 KRRKSLISVFEIVDRVPTIEPDDNSALKPPNVYGSIELKNVDFCYPTRPEILVLSNFSLK 1183

Query: 66   VPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQE 125
            +  G+T+A+VG SGSGKST+++L+ER+YDP +G+VLLDGRD+K   LRWLR  +GLV QE
Sbjct: 1184 ISGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQE 1243

Query: 126  PALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
            P +F+TTI+ENI+  R  A + E++EAAR+ANAH FI  LP GYDT +
Sbjct: 1244 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHI 1291

[Close]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL
Match: A0A5A7TL39 (ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003400 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN
Sbjct: 395 MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 454

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 455 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 514

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 515 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 567

[Close]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL
Match: A0A5D3DND1 (ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002710 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88
Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGLIELKNVDFAYPSRPDVRILN
Sbjct: 406 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLIELKNVDFAYPSRPDVRILN 465

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDI+TLKLRWLRQQIG
Sbjct: 466 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIETLKLRWLRQQIG 525

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 526 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 578

[Close]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL
Match: A0A5A7TKI3 (ABC transporter B family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002720 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDFAYPSRPDVRILN
Sbjct: 396 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFAYPSRPDVRILN 455

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 456 NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 515

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 516 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 568

[Close]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL
Match: A0A0A0LE22 (Multidrug resistance protein 1, 2 OS=Cucumis sativus OX=3659 GN=Csa_3G740250 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87
Identity = 169/173 (97.69%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDFAYPSRPDVRILN
Sbjct: 399 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFAYPSRPDVRILN 458

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSLTVPAGKTIALVGSSGSGKSTVV+LIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 459 NFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 518

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 519 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 571

[Close]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL
Match: A0A0A0LAI1 (Multidrug resistance protein 1, 2 OS=Cucumis sativus OX=3659 GN=Csa_3G740230 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 168/173 (97.11%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           MSSFAKAKVAAAKIYRIIDHKPTLNRNN+SGLELESVSGL+ELKNVDF YPSRPDVRILN
Sbjct: 384 MSSFAKAKVAAAKIYRIIDHKPTLNRNNESGLELESVSGLVELKNVDFTYPSRPDVRILN 443

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NFSL VPAGKTIALVGSSGSGKSTVVALIERFYDP SGEVLLDGRDIKTLKLRWLRQQIG
Sbjct: 444 NFSLAVPAGKTIALVGSSGSGKSTVVALIERFYDPISGEVLLDGRDIKTLKLRWLRQQIG 503

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV
Sbjct: 504 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 556

[Close]

BLAST of MELO3C009357.1 vs. TAIR 10
Match: AT2G36910.1 (ATP binding cassette subfamily B1 )

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-83
Identity = 148/173 (85.55%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           M++FAKAKVAAAKI+RIIDHKPT+ RN++SG+EL+SV+GL+ELKNVDF+YPSRPDV+ILN
Sbjct: 328 MAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVKILN 387

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NF L+VPAGKTIALVGSSGSGKSTVV+LIERFYDPNSG+VLLDG+D+KTLKLRWLRQQIG
Sbjct: 388 NFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIG 447

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEPALFAT+IKENILLGRP+ADQ+E+EEAARVANAHSFIIKLP+G+DTQV
Sbjct: 448 LVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQV 500

[Close]

BLAST of MELO3C009357.1 vs. TAIR 10
Match: AT3G28860.1 (ATP binding cassette subfamily B19 )

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 108/173 (62.43%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           + +F+K K A  K+  II+ +PT+ ++   G  L+ V G IE K+V F+YPSRPDV I  
Sbjct: 325 LGAFSKGKAAGYKLMEIINQRPTIIQDPLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFR 384

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
           NF++  P+GKT+A+VG SGSGKSTVV+LIERFYDPNSG++LLDG +IKTL+L++LR+QIG
Sbjct: 385 NFNIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIG 444

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LV+QEPALFATTI ENIL G+P+A  +EVE AA  ANAHSFI  LP+GYDTQV
Sbjct: 445 LVNQEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQV 497

[Close]

BLAST of MELO3C009357.1 vs. TAIR 10
Match: AT2G39480.1 (P-glycoprotein 6 )

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-52
Identity = 93/168 (55.36%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 6    KAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLT 65
            K + + A ++ IID  PT+  ++ S L   +V G IELKN+DF YP+RP+V +L+NFSL 
Sbjct: 1123 KRRRSLASVFEIIDRVPTIEPDDTSALSPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLK 1182

Query: 66   VPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQE 125
            V  G+T+A+VG SGSGKST+++LIER+YDP +G+VLLDGRD+K+  LRWLR  +GL+ QE
Sbjct: 1183 VNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQE 1242

Query: 126  PALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
            P +F+TTI+ENI+  R  A + E++EAAR+ANAH FI  LP GYDT +
Sbjct: 1243 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHI 1290

[Close]

BLAST of MELO3C009357.1 vs. TAIR 10
Match: AT3G55320.1 (P-glycoprotein 20 )

HSP 1 Score: 201.1 bits (510), Expect = 7.5e-52
Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 6    KAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILNNFSLT 65
            K + +   ++ I+D  PT+  ++ S L+  +V G IELKNVDF YP+RP++ +L+NFSL 
Sbjct: 1124 KRRKSLISVFEIVDRVPTIEPDDNSALKPPNVYGSIELKNVDFCYPTRPEILVLSNFSLK 1183

Query: 66   VPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIGLVSQE 125
            +  G+T+A+VG SGSGKST+++L+ER+YDP +G+VLLDGRD+K   LRWLR  +GLV QE
Sbjct: 1184 ISGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVLLDGRDLKLYNLRWLRSHMGLVQQE 1243

Query: 126  PALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
            P +F+TTI+ENI+  R  A + E++EAAR+ANAH FI  LP GYDT +
Sbjct: 1244 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHI 1291

[Close]

BLAST of MELO3C009357.1 vs. TAIR 10
Match: AT5G46540.1 (P-glycoprotein 7 )

HSP 1 Score: 199.1 bits (505), Expect = 2.9e-51
Identity = 97/173 (56.07%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 1   MSSFAKAKVAAAKIYRIIDHKPTLNRNNKSGLELESVSGLIELKNVDFAYPSRPDVRILN 60
           ++SFA    AA K++  I  KP ++  + SG  LE + G IEL++V F YP+RPDV+I  
Sbjct: 317 LNSFAAGTAAAYKMFETIKRKPKIDAYDMSGEVLEEIKGDIELRDVYFRYPARPDVQIFV 376

Query: 61  NFSLTVPAGKTIALVGSSGSGKSTVVALIERFYDPNSGEVLLDGRDIKTLKLRWLRQQIG 120
            FSLTVP G T+ALVG SGSGKSTV++LIERFYDP SGEVL+DG D+K  +++W+R +IG
Sbjct: 377 GFSLTVPNGMTVALVGQSGSGKSTVISLIERFYDPESGEVLIDGIDLKKFQVKWIRSKIG 436

Query: 121 LVSQEPALFATTIKENILLGRPEADQLEVEEAARVANAHSFIIKLPEGYDTQV 174
           LVSQEP LFATTI+ENI+ G+ +A   E+  A ++ANA +FI KLP+G +T V
Sbjct: 437 LVSQEPILFATTIRENIVYGKKDASDQEIRTALKLANASNFIDKLPQGLETMV 489

The following BLAST results are available for this feature:

BLAST of MELO3C009357.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043994.1	5.5e-89	100.00	ABC transporter B family member 1-like [Cucumis melo var. makuwa]	[more]
TYK25146.1	4.7e-88	98.84	ABC transporter B family member 1-like [Cucumis melo var. makuwa]	[more]
KAA0043993.1	2.3e-87	98.27	ABC transporter B family member 1 [Cucumis melo var. makuwa] >TYK25147.1 ABC tra...	[more]
XP_031737655.1	5.2e-87	97.69	LOW QUALITY PROTEIN: ABC transporter B family member 1 [Cucumis sativus]	[more]
KAE8651042.1	5.2e-87	97.69	hypothetical protein Csa_002573 [Cucumis sativus]	[more]

BLAST of MELO3C009357.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR72	2.3e-82	85.55	ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 ...	[more]
Q9LJX0	1.7e-56	62.43	ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=...	[more]
Q6YUU5	5.1e-53	58.82	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8LPT1	2.8e-51	55.36	ABC transporter B family member 6 OS=Arabidopsis thaliana OX=3702 GN=ABCB6 PE=1 ...	[more]
Q9M3B9	1.1e-50	53.57	ABC transporter B family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCB20 PE=...	[more]

BLAST of MELO3C009357.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TL39	2.7e-89	100.00	ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5D3DND1	2.3e-88	98.84	ABC transporter B family member 1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7TKI3	1.1e-87	98.27	ABC transporter B family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LE22	2.5e-87	97.69	Multidrug resistance protein 1, 2 OS=Cucumis sativus OX=3659 GN=Csa_3G740250 PE=...	[more]
A0A0A0LAI1	1.2e-86	97.11	Multidrug resistance protein 1, 2 OS=Cucumis sativus OX=3659 GN=Csa_3G740230 PE=...	[more]

BLAST of MELO3C009357.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36910.1	1.7e-83	85.55	ATP binding cassette subfamily B1	[more]
AT3G28860.1	1.2e-57	62.43	ATP binding cassette subfamily B19	[more]
AT2G39480.1	2.0e-52	55.36	P-glycoprotein 6	[more]
AT3G55320.1	7.5e-52	53.57	P-glycoprotein 20	[more]
AT5G46540.1	2.9e-51	56.07	P-glycoprotein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 2..30 e-value: 6.4E-84 score: 284.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 31..173 e-value: 6.4E-84 score: 284.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 32..173
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 59..153 e-value: 1.2E-21 score: 77.6
None	No IPR available	PANTHER	PTHR24221:SF489	ABC TRANSPORTER B FAMILY MEMBER 1	coord: 1..173
IPR039421	Type 1 protein exporter	PANTHER	PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	coord: 1..173

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009357	MELO3C009357	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009357.1:exon:126224	MELO3C009357.1:exon:126224	exon
MELO3C009357.1:exon:126225	MELO3C009357.1:exon:126225	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009357.1:cds	MELO3C009357.1:cds	CDS
MELO3C009357.1:cds	MELO3C009357.1:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009357.1	MELO3C009357.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding