MELO3C006348.jh1.t3 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTCCTCGAAGAATTTCAAGCGAGTACGTACCATCTTCTCCCTTCTTTTCTTTTGCGGCAATTTCTCTTGATTCATAACTGTTTCAAAACCCTATCTCGTTAATTACTCTAATGCTTTCTTTGTTTTTATCCGATGGATTTTTACTGATATATGTATTTTTATATATGTTTCTGTTATTTCGTGATGTGCCCTTTTCTTGATTTATGGTAATGTCTTTCTGTTTTGGTTCTAGGATTGTAATCCTTTTGCGGGTGAAAATTTGTTCCTTTTTTTGCGTTTTGAATAATTGGGTTAGATAAAGTTGAGTATAATATTAGAAAGAAAGATAAATAAGTTTTGAAGATTGGGTTTGATAAAGTTAACAACAATGAGATTTTACATCTTCTATTTTACCTTTTATACAGACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGTATGCTTCTTCTTTCATTAGCGATGTGCAATTAGTTTTCTAGATGGCTTTATTATTATCTTATTTGTTTCTCCTCTCTTTTTCTTTCTTGATTTTTTTTCTTTTTTATGGATGTTGGAATATGTTAATACTCCAAAATCATTTAATGGCCTCCTTTGTAATGTCACTGTTATTGTACTTTATGTTGGCATATGTGTTTAGGGATTTTCAAGAATGTTGCTCCATATGTGAATGCAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTATGTCGAAATGTCTTTGAAACCTTTCAACGTAGTGTGGTTTAACAGATTGTGTGGGTGACTTTGAACAGACGCGCACTGTACTTTATTATAATGATTAGGATATTAATTTTCTGCTTAGAATGATTCAAGTTAAAATAATAAAAGCAATAAAAACTAGTTTGACCATTTTTACAAAATGCAAATAGGGTGTATGATGTTTAATGCTTGTAATGAATGTTCTATGCTTCCAGTTTTGTACTTGTGCAGTTATCCTTTCCTACATCTTGCTTAGAAAAGAGCATTGCAAAAGCACCTTCATGTTTATCATTGTCATTGACTAACATGTAGAGAGAGGGGGAAGGAGTCTCCCAGGTTTCTCGTGTAGTCTCAAATCTCAATGACTAACACAGAAACTAATACCTCATCCTTGACCTCCAGCAGCTTCAACGATATTTTTTTCTTTTTTATCGTCTGTAACTAAGGATGTTGTTTTGTGTGTGTTTTCTTTTGTTATTTTACTAGAAAAAGGACAGGTCTTCTTCTCGTTGTTTGCATTTTTACTTCTTCTGTTTATTTGTATTGTGCTTCAGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGGTAATATCTTTGTTTCTACCTTTGATATCTTCTATTATTATGATTCTCTAGGCTCCTGCCAATATGGAGTATAAATGCATTTATCTTACTCATTTTGGGCCTAACTCCTATCTTCTATTTATCATTGTTATTTGCAGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAAGTAAGTTAATTTCATACTTACATCAATGTGTGTATTTCACATGAACGATGTTGAAATTAATTGCCGACAAATGACACCAATTACTTAGGAGGTTGCCTTATTACTTTAGGCAGTCAATGTTTGTGATGAACTGGAGATACTAGTATATCCTACAGTAACATTTATTGTAGGCATGTTTAACAAGAGATTGAGGACATCTTCAATAATGAGACTATTTTCTGCAGAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATGTATGTTACCATCCTTTCCTCCCACTATTTCCAAATTTTTTTGGTGGTTTGAGTCTATAAGCTAACCCAGTATTCTCTTTCATACCAGTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAA ATGTCTTTCCTCGAAGAATTTCAAGCGAACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAATATATCCTACAAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAA ATGTCTTTCCTCGAAGAATTTCAAGCGAACCTGGAATCACTACCCAACATTCTTCAAAAGAAGTATGCTTTGCTGCATGATTTAGATCAAAGTTTGCAAGGACTAGTGAAACAGAATGAACAACGCTGTGAGCAAGAAATTGAGGATATTAAGAGGGGAGTTAAATGTGGTAATATTACTCCAGATACTTCACTCATTAGATTCTCTGATGAAGCTCTTGATGAACAGAAGCATAGCATCAGAATTGCTGATGAAAAGGTTGCCCTTGCTGTTCAGGCATATGATTTGGTAGATACCCACATACAACAGCTTGACCAGTATTTGAAGAATTTTGATGAAAAGCTTCGTCACGAAAGAGGTACTGCTGCTGCTACTGGGTTGCCAGCTTCAAGTGTAGATGGTAACACAAAATCTGGACGGGGAACAGAAGGGGGTAGAGGTGGGCGTAAAAATATATCCTACAAAGAAATGCCCAAGCTGCAGCTTCAACAACAGAAGCACCAACTACGGCAACTCCCACAGGAATGGAACTTGAATTACCAGTTGATCCAAATGAACCAACTTACTGTCTCTGCAACCAAGTTAGTTACGGGGAGATGGTTGCCTGTGATAATCCTAATTGCAAGATCGAATGGTTTCATTTTGGCTGTGTTGGTCTAA MSFLEEFQANLESLPNILQKKYALLHDLDQSLQGLVKQNEQRCEQEIEDIKRGVKCGNITPDTSLIRFSDEALDEQKHSIRIADEKVALAVQAYDLVDTHIQQLDQYLKNFDEKLRHERGTAAATGLPASSVDGNTKSGRGTEGGRGGRKNISYKEMPKLQLQQQKHQLRQLPQEWNLNYQLIQMNQLTVSATKLVTGRWLPVIILIARSNGFILAVLV Homology
BLAST of MELO3C006348.jh1.t3 vs. NCBI nr
Match: XP_011650900.1 (PHD finger protein ING1 isoform X2 [Cucumis sativus]) HSP 1 Score: 388 bits (996), Expect = 3.13e-135 Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. NCBI nr
Match: XP_038875409.1 (PHD finger protein ING1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 365 bits (936), Expect = 4.68e-126 Identity = 197/221 (89.14%), Postives = 201/221 (90.95%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. NCBI nr
Match: XP_008438417.1 (PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438418.1 PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438419.1 PREDICTED: PHD finger protein ING1 [Cucumis melo] >XP_008438420.1 PREDICTED: PHD finger protein ING1 [Cucumis melo]) HSP 1 Score: 295 bits (756), Expect = 2.93e-98 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. NCBI nr
Match: XP_004134022.1 (PHD finger protein ING1 isoform X1 [Cucumis sativus] >XP_011650897.1 PHD finger protein ING1 isoform X1 [Cucumis sativus] >XP_011650899.1 PHD finger protein ING1 isoform X1 [Cucumis sativus] >KGN56782.1 hypothetical protein Csa_009683 [Cucumis sativus]) HSP 1 Score: 292 bits (747), Expect = 6.85e-97 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. NCBI nr
Match: XP_023539868.1 (PHD finger protein ING1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286 bits (732), Expect = 1.45e-94 Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy Swiss-Prot
Match: Q9LIQ6 (PHD finger protein ING1 OS=Arabidopsis thaliana OX=3702 GN=ING1 PE=1 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 3.1e-47 Identity = 101/150 (67.33%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy Swiss-Prot
Match: B3H615 (PHD finger protein ING2 OS=Arabidopsis thaliana OX=3702 GN=ING2 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08 Identity = 34/124 (27.42%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy Swiss-Prot
Match: Q5ZK36 (Inhibitor of growth protein 3 OS=Gallus gallus OX=9031 GN=ING3 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07 Identity = 38/115 (33.04%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy Swiss-Prot
Match: Q9NXR8 (Inhibitor of growth protein 3 OS=Homo sapiens OX=9606 GN=ING3 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 5.3e-07 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy Swiss-Prot
Match: Q8VEK6 (Inhibitor of growth protein 3 OS=Mus musculus OX=10090 GN=Ing3 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 5.3e-07 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy TrEMBL
Match: A0A1S3AWY6 (PHD finger protein ING OS=Cucumis melo OX=3656 GN=LOC103483518 PE=3 SV=1) HSP 1 Score: 295 bits (756), Expect = 1.42e-98 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy TrEMBL
Match: A0A0A0L831 (PHD finger protein ING OS=Cucumis sativus OX=3659 GN=Csa_3G133330 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 3.32e-97 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy TrEMBL
Match: A0A6J1FWG2 (PHD finger protein ING OS=Cucurbita moschata OX=3662 GN=LOC111448643 PE=3 SV=1) HSP 1 Score: 286 bits (732), Expect = 7.01e-95 Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy TrEMBL
Match: A0A6J1IBH6 (PHD finger protein ING OS=Cucurbita maxima OX=3661 GN=LOC111473163 PE=3 SV=1) HSP 1 Score: 285 bits (730), Expect = 1.41e-94 Identity = 144/154 (93.51%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. ExPASy TrEMBL
Match: A0A5A7U1T1 (PHD finger protein ING1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002320 PE=4 SV=1) HSP 1 Score: 279 bits (713), Expect = 4.73e-92 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. TAIR 10
Match: AT3G24010.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 189.9 bits (481), Expect = 2.2e-48 Identity = 101/150 (67.33%), Postives = 121/150 (80.67%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. TAIR 10
Match: AT1G54390.4 (PHD finger protein-related ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 34/124 (27.42%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. TAIR 10
Match: AT1G54390.1 (PHD finger protein-related ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 34/124 (27.42%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. TAIR 10
Match: AT1G54390.3 (PHD finger protein-related ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 34/124 (27.42%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of MELO3C006348.jh1.t3 vs. TAIR 10
Match: AT1G54390.2 (PHD finger protein-related ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 34/124 (27.42%), Postives = 66/124 (53.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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